myExperiment - Workflows

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Type: Taverna 1

Wsdl: http://www.ebi.ac.uk/Tools/webservices/wsdl/WSDbfetch.wsdl

or http://www.ebi.ac.uk/Tools/webservices/wsdl/WSClustalW2.wsdl

or http://www.ebi.ac.uk/Tools/webservices/wsdl/WSWUBlast.wsdl

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Taverna 1

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Hamish McWilliam

NCBI_QBLAST (2)

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Perform an NCBI BLAST sequence similarity search using NCBI's QBLAST service (see http://www.ncbi.nlm.nih.gov/BLAST/Doc/urlapi.html). The query sequence, database to search and BLAST program to use are inputs, the other parameters for the search are allowed to default.

Created: 2008-06-07 | Last updated: 2008-06-07

Credits: Hamish McWilliam

Taverna 1

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Achille Zappa

MY_Multi_Alignment_Phylo (1)

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This workflow performs a 'multiple' multiple sequence alignment and phylogenetic analysis.

Created: 2009-11-03

Credits: Achille Zappa

Taverna 1

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Achille Zappa

M_Fetch_e-T_phylo_boot - (BETA) (1)

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This workflow performs a generic protein sequence analysis. In order to do that a novel protein sequence enters into the software along with a list of known protein identifiers chosen by the biologist to perform a homology search, followed by a multiple sequence alignment and finally a phylogenetic analysis.