myExperiment - Workflows

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Type: Taverna 1

Wsdl: http://www.ebi.ac.uk/Tools/webservices/wsdl/WSDbfetch.wsdl

or http://eutils.ncbi.nlm.nih.gov/entrez/eutils/soap/eutils.wsdl

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Taverna 1

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Achille Zappa

M_Fetch_e-T_phylo_boot - (BETA) (1)

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This workflow performs a generic protein sequence analysis. In order to do that a novel protein sequence enters into the software along with a list of known protein identifiers chosen by the biologist to perform a homology search, followed by a multiple sequence alignment and finally a phylogenetic analysis.

Created: 2010-03-10 | Last updated: 2010-03-10

Credits: Achille Zappa Hamish McWilliam

Taverna 1

Uploader

Stian Soiland-Reyes

Pathway to Pubmed (1)

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This workflow takes in a list of KEGG pathway descriptions and searches the PubMed database for corresponding articles. Any matches to the pathways are then retrieved (abstracts only). These abstracts are then returned to the user.