Triplify UniProt text search results from all databases [myexperiments:uniprotkb_search_all2rdf]

None

String seperatorString = "\n";
if (seperator != void) {
	seperatorString = seperator;
}
StringBuffer sb = new StringBuffer();
for (Iterator i = stringlist.iterator(); i.hasNext();) {
	String item = (String) i.next();
	sb.append(item);
	if (i.hasNext()) {
		sb.append(seperatorString);
	}
}
concatenated = sb.toString();

Name	Type	Description
UniProt_KB_namespaces	workflow
UniProt_KB_text_search	workflow
Merge_String_List_to_a_String	localworker	Script String seperatorString = "\n"; if (seperator != void) { seperatorString = seperator; } StringBuffer sb = new StringBuffer(); for (Iterator i = stringlist.iterator(); i.hasNext();) { String item = (String) i.next(); sb.append(item); if (i.hasNext()) { sb.append(seperatorString); } } concatenated = sb.toString();
Merge_String_List_to_a_String2	localworker	Script String seperatorString = "\n"; if (seperator != void) { seperatorString = seperator; } StringBuffer sb = new StringBuffer(); for (Iterator i = stringlist.iterator(); i.hasNext();) { String item = (String) i.next(); sb.append(item); if (i.hasNext()) { sb.append(seperatorString); } } concatenated = sb.toString();
Flatten_List	localworker	Script flatten(inputs, outputs, depth) { for (i = inputs.iterator(); i.hasNext();) { element = i.next(); if (element instanceof Collection && depth > 0) { flatten(element, outputs, depth - 1); } else { outputs.add(element); } } } outputlist = new ArrayList(); flatten(inputlist, outputlist, 1);
Count	beanshell	Script out = in;

Name	Inputs	Outputs
Count	in	out
build_uniprot_namespace_ntriple	namespace	ntriples
UniProt_provider		ntriples
build_uniprot_search_url	string1 string2	output
build_bmuri	string1 string2	output
build_ntriples	stringlist namespace search	count_ntriples search_ntriples

Name	Description
uniprotkb_search_all_ntriples
bmuris
search_count_ntriples
o1

Source	Sink
query	UniProt_KB_text_search:query
Count:out	UniProt_KB_text_search:uniprotkb_namespace
UniProt_KB_text_search:uniprotkb_search_ntriples	Merge_String_List_to_a_String:stringlist
UniProt_KB_text_search:search_count_ntriples	Merge_String_List_to_a_String2:stringlist
UniProt_KB_text_search:bmuris	Flatten_List:inputlist
UniProt_KB_namespaces:namespace_list	Count:in
Merge_String_List_to_a_String:concatenated	uniprotkb_search_all_ntriples
Flatten_List:outputlist	bmuris
Merge_String_List_to_a_String2:concatenated	search_count_ntriples
UniProt_KB_text_search:search_count_ntriples	o1

Triplify UniProt text search results from all databases [myexperiments:uniprotkb_search_all2rdf]

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