caArraytestData00 test data set 2009-11-19 15:21:24.324 CST http://www.mcs.anl.gov/~wtan/t2-workflow-repo/lymphoma/full-data/testData.xml Note: please do NOT use this URL directly as the input value. Download the file from the URL and use "Add file locations ...", or use "Add URL...", from the input dialog. 2009-11-19 15:23:56.895 CST http://www.mcs.anl.gov/~wtan/t2-workflow-repo/lymphoma/sample-data-9/testData.xml Note: please do NOT use this URL directly as the input value. Download the file from the URL and use "Add file locations ...", or use "Add URL...", from the input dialog. 2009-11-19 15:21:17.693 CST testClass00 http://www.mcs.anl.gov/~wtan/t2-workflow-repo/lymphoma/full-data/testClass.xml Note: please do NOT use this URL directly as the input value. Download the file from the URL and use "Add file locations ...", or use "Add URL...", from the input dialog. 2009-11-19 16:01:55.774 CST <ns1:ClassMembership xmlns:ns1="gme://GenePattern.caBIG/1/gridExtensions"><classNames xmlns="">DLBCL</classNames><classNames xmlns="">FL</classNames><numSamples xmlns="">38</numSamples><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleNames xmlns="">testSample_0</sampleNames><sampleNames xmlns="">testSample_1</sampleNames><sampleNames xmlns="">testSample_2</sampleNames><sampleNames xmlns="">testSample_3</sampleNames><sampleNames xmlns="">testSample_4</sampleNames><sampleNames xmlns="">testSample_5</sampleNames><sampleNames xmlns="">testSample_6</sampleNames><sampleNames xmlns="">testSample_7</sampleNames><sampleNames xmlns="">testSample_8</sampleNames><sampleNames xmlns="">testSample_9</sampleNames><sampleNames xmlns="">testSample_10</sampleNames><sampleNames xmlns="">testSample_11</sampleNames><sampleNames xmlns="">testSample_12</sampleNames><sampleNames xmlns="">testSample_13</sampleNames><sampleNames xmlns="">testSample_14</sampleNames><sampleNames xmlns="">testSample_15</sampleNames><sampleNames xmlns="">testSample_16</sampleNames><sampleNames xmlns="">testSample_17</sampleNames><sampleNames xmlns="">testSample_18</sampleNames><sampleNames xmlns="">testSample_19</sampleNames><sampleNames xmlns="">testSample_20</sampleNames><sampleNames xmlns="">testSample_21</sampleNames><sampleNames xmlns="">testSample_22</sampleNames><sampleNames xmlns="">testSample_23</sampleNames><sampleNames xmlns="">testSample_24</sampleNames><sampleNames xmlns="">testSample_25</sampleNames><sampleNames xmlns="">testSample_26</sampleNames><sampleNames xmlns="">testSample_27</sampleNames><sampleNames xmlns="">testSample_28</sampleNames><sampleNames xmlns="">testSample_29</sampleNames><sampleNames xmlns="">testSample_30</sampleNames><sampleNames xmlns="">testSample_31</sampleNames><sampleNames xmlns="">testSample_32</sampleNames><sampleNames xmlns="">testSample_33</sampleNames><sampleNames xmlns="">testSample_34</sampleNames><sampleNames xmlns="">testSample_35</sampleNames><sampleNames xmlns="">testSample_36</sampleNames><sampleNames xmlns="">testSample_37</sampleNames></ns1:ClassMembership> 2009-11-19 15:18:39.898 CST Class memebership information for test data 2009-11-19 15:19:04.626 CST trainingClass00 class memebership information for training data 2009-11-19 15:19:20.32 CST <ns1:ClassMembership xmlns:ns1="gme://GenePattern.caBIG/1/gridExtensions"><classNames xmlns="">DLBCL</classNames><classNames xmlns="">FL</classNames><numSamples xmlns="">39</numSamples><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">1</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleClasses xmlns="">0</sampleClasses><sampleNames xmlns="">trainingSample_0</sampleNames><sampleNames xmlns="">trainingSample_1</sampleNames><sampleNames xmlns="">trainingSample_2</sampleNames><sampleNames xmlns="">trainingSample_3</sampleNames><sampleNames xmlns="">trainingSample_4</sampleNames><sampleNames xmlns="">trainingSample_5</sampleNames><sampleNames xmlns="">trainingSample_6</sampleNames><sampleNames xmlns="">trainingSample_7</sampleNames><sampleNames xmlns="">trainingSample_8</sampleNames><sampleNames xmlns="">trainingSample_9</sampleNames><sampleNames xmlns="">trainingSample_10</sampleNames><sampleNames xmlns="">trainingSample_11</sampleNames><sampleNames xmlns="">trainingSample_12</sampleNames><sampleNames xmlns="">trainingSample_13</sampleNames><sampleNames xmlns="">trainingSample_14</sampleNames><sampleNames xmlns="">trainingSample_15</sampleNames><sampleNames xmlns="">trainingSample_16</sampleNames><sampleNames xmlns="">trainingSample_17</sampleNames><sampleNames xmlns="">trainingSample_18</sampleNames><sampleNames xmlns="">trainingSample_19</sampleNames><sampleNames xmlns="">trainingSample_20</sampleNames><sampleNames xmlns="">trainingSample_21</sampleNames><sampleNames xmlns="">trainingSample_22</sampleNames><sampleNames xmlns="">trainingSample_23</sampleNames><sampleNames xmlns="">trainingSample_24</sampleNames><sampleNames xmlns="">trainingSample_25</sampleNames><sampleNames xmlns="">trainingSample_26</sampleNames><sampleNames xmlns="">trainingSample_27</sampleNames><sampleNames xmlns="">trainingSample_28</sampleNames><sampleNames xmlns="">trainingSample_29</sampleNames><sampleNames xmlns="">trainingSample_30</sampleNames><sampleNames xmlns="">trainingSample_31</sampleNames><sampleNames xmlns="">trainingSample_32</sampleNames><sampleNames xmlns="">trainingSample_33</sampleNames><sampleNames xmlns="">trainingSample_34</sampleNames><sampleNames xmlns="">trainingSample_35</sampleNames><sampleNames xmlns="">trainingSample_36</sampleNames><sampleNames xmlns="">trainingSample_37</sampleNames><sampleNames xmlns="">trainingSample_38</sampleNames></ns1:ClassMembership> 2009-11-19 15:19:55.899 CST http://www.mcs.anl.gov/~wtan/t2-workflow-repo/lymphoma/full-data/trainingClass.xml Note: please do NOT use this URL directly as the input value. Download the file from the URL and use "Add file locations ...", or use "Add URL...", from the input dialog. 2009-11-19 16:02:23.370 CST http://www.mcs.anl.gov/~wtan/t2-workflow-repo/lymphoma/full-data/testClass.xml 2009-11-19 16:02:05.863 CST trainingData00 training data set 2009-11-19 15:24:06.15 CST http://www.mcs.anl.gov/~wtan/t2-workflow-repo/lymphoma/full-data/trainingData.xml Note: please do NOT use this URL directly as the input value. Download the file from the URL and use "Add file locations ...", or use "Add URL...", from the input dialog. 2009-11-19 15:24:16.877 CST SVM_ResultparametersXML10trainingData0testData0trainingClass0testClass0output00net.sf.taverna.t2.activitieswsdl-activity0.8net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="PerformAnalysisRequest" name="parameters" qname="{http://svm.genepattern.org/SVM}PerformAnalysisRequest"><s:elements><s:complextype optional="false" unbounded="false" typename="&gt;&gt;PerformAnalysisRequest&gt;trainingClass" name="trainingClass" qname="{http://svm.genepattern.org/SVM}&gt;PerformAnalysisRequest&gt;trainingClass"><s:elements><s:complextype optional="false" unbounded="false" typename="ClassMembership" name="ClassMembership" qname="{gme://GenePattern.caBIG/1/gridExtensions}&gt;&gt;PerformAnalysisRequest&gt;trainingClass&gt;ClassMembership"><s:elements><s:arraytype optional="false" unbounded="true" wrapped="false" typename="string" name="classNames" qname="ClassMembership&gt;classNames"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype><s:basetype optional="false" unbounded="false" typename="int" name="numSamples" qname="ClassMembership&gt;numSamples" /><s:arraytype optional="false" unbounded="true" wrapped="false" typename="int" name="sampleClasses" qname="ClassMembership&gt;sampleClasses"><s:elementtype><s:basetype optional="false" unbounded="false" typename="int" name="" qname="{http://www.w3.org/2001/XMLSchema}int" /></s:elementtype></s:arraytype><s:arraytype optional="false" unbounded="true" wrapped="false" typename="string" name="sampleNames" qname="ClassMembership&gt;sampleNames"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:elements></s:complextype><s:complextype optional="false" unbounded="false" typename="&gt;&gt;PerformAnalysisRequest&gt;testClass" name="testClass" qname="{http://svm.genepattern.org/SVM}&gt;PerformAnalysisRequest&gt;testClass"><s:elements><s:complextype optional="false" unbounded="false" typename="ClassMembership" name="ClassMembership" qname="{gme://GenePattern.caBIG/1/gridExtensions}&gt;&gt;PerformAnalysisRequest&gt;testClass&gt;ClassMembership"><s:elements><s:arraytype id="ClassMembership&gt;classNames" optional="false" unbounded="true" wrapped="false" typename="string" name="classNames" /><s:basetype optional="false" unbounded="false" typename="int" name="numSamples" qname="ClassMembership&gt;numSamples" /><s:arraytype id="ClassMembership&gt;sampleClasses" optional="false" unbounded="true" wrapped="false" typename="int" name="sampleClasses" /><s:arraytype id="ClassMembership&gt;sampleNames" optional="false" unbounded="true" wrapped="false" typename="string" name="sampleNames" /></s:elements></s:complextype></s:elements></s:complextype><s:complextype optional="false" unbounded="false" typename="&gt;&gt;PerformAnalysisRequest&gt;trainingData" name="trainingData" qname="{http://svm.genepattern.org/SVM}&gt;PerformAnalysisRequest&gt;trainingData"><s:elements><s:complextype optional="false" unbounded="false" typename="Data" name="Data" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}&gt;&gt;PerformAnalysisRequest&gt;trainingData&gt;Data"><s:elements><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Scalar" name="scalar" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;scalar"><s:elementtype><s:complextype optional="false" unbounded="false" typename="Scalar" name="" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar&gt;name" /><s:basetype optional="false" unbounded="false" typename="string" name="type" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar&gt;type" /><s:basetype optional="false" unbounded="false" typename="string" name="value" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar&gt;value" /></s:elements></s:complextype></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="List" name="list" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;list"><s:elementtype><s:complextype optional="false" unbounded="false" typename="List" name="" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;name" /><s:basetype optional="false" unbounded="false" typename="string" name="type" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;type" /><s:basetype optional="false" unbounded="false" typename="integer" name="length" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;length" /><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Scalar" name="scalar" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;scalar"><s:elementtype><s:complextype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar" optional="false" unbounded="false" typename="Scalar" name="" /></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="List" name="list" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;list"><s:elementtype><s:complextype optional="false" unbounded="false" typename="List" name="" qname="List"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;name" /><s:basetype optional="false" unbounded="false" typename="string" name="type" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;type" /><s:basetype optional="false" unbounded="false" typename="integer" name="length" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;length" /><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;scalar" optional="true" unbounded="true" wrapped="false" typename="Scalar" name="scalar" /><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;list" optional="true" unbounded="true" wrapped="false" typename="List" name="list" /><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Null" name="aNull" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;aNull"><s:elementtype><s:complextype optional="false" unbounded="false" typename="Null" name="" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Null"><s:elements /></s:complextype></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Array" name="array" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;array"><s:elementtype><s:complextype optional="false" unbounded="false" typename="Array" name="" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="dimensions" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array&gt;dimensions" /><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array&gt;name" /><s:basetype optional="false" unbounded="false" typename="string" name="type" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array&gt;type" /><s:basetype optional="false" unbounded="false" typename="string" name="base64Value" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array&gt;base64Value" /></s:elements></s:complextype></s:elementtype></s:arraytype></s:elements></s:complextype></s:elementtype></s:arraytype><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;aNull" optional="true" unbounded="true" wrapped="false" typename="Null" name="aNull" /><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;array" optional="true" unbounded="true" wrapped="false" typename="Array" name="array" /></s:elements></s:complextype></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Null" name="aNull" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;aNull"><s:elementtype><s:complextype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Null" optional="false" unbounded="false" typename="Null" name="" /></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Array" name="array" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;array"><s:elementtype><s:complextype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array" optional="false" unbounded="false" typename="Array" name="" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:elements></s:complextype><s:complextype optional="false" unbounded="false" typename="&gt;&gt;PerformAnalysisRequest&gt;testData" name="testData" qname="{http://svm.genepattern.org/SVM}&gt;PerformAnalysisRequest&gt;testData"><s:elements><s:complextype optional="false" unbounded="false" typename="Data" name="Data" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}&gt;&gt;PerformAnalysisRequest&gt;testData&gt;Data"><s:elements><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;scalar" optional="true" unbounded="true" wrapped="false" typename="Scalar" name="scalar" /><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;list" optional="true" unbounded="true" wrapped="false" typename="List" name="list" /><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;aNull" optional="true" unbounded="true" wrapped="false" typename="Null" name="aNull" /><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;array" optional="true" unbounded="true" wrapped="false" typename="Array" name="array" /></s:elements></s:complextype></s:elements></s:complextype></s:elements></s:complextype></s:extensions> java.lang.String true trainingClass 0 'text/xml' java.lang.String true testClass 0 'text/xml' java.lang.String true trainingData 0 'text/xml' java.lang.String true testData 0 'text/xml' 0 output 0 'text/xml' net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 0 0 0 net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvoketrainingDataXMLData0output00net.sf.taverna.t2.activitieswsdl-activity0.8net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="&gt;&gt;PerformAnalysisRequest&gt;trainingData" name="trainingData" qname="{http://svm.genepattern.org/SVM}&gt;PerformAnalysisRequest&gt;trainingData"><s:elements><s:complextype optional="false" unbounded="false" typename="Data" name="Data" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}&gt;&gt;PerformAnalysisRequest&gt;trainingData&gt;Data"><s:elements><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Scalar" name="scalar" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;scalar"><s:elementtype><s:complextype optional="false" unbounded="false" typename="Scalar" name="" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar&gt;name" /><s:basetype optional="false" unbounded="false" typename="string" name="type" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar&gt;type" /><s:basetype optional="false" unbounded="false" typename="string" name="value" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar&gt;value" /></s:elements></s:complextype></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="List" name="list" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;list"><s:elementtype><s:complextype optional="false" unbounded="false" typename="List" name="" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;name" /><s:basetype optional="false" unbounded="false" typename="string" name="type" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;type" /><s:basetype optional="false" unbounded="false" typename="integer" name="length" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;length" /><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Scalar" name="scalar" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;scalar"><s:elementtype><s:complextype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar" optional="false" unbounded="false" typename="Scalar" name="" /></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="List" name="list" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;list"><s:elementtype><s:complextype optional="false" unbounded="false" typename="List" name="" qname="List"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;name" /><s:basetype optional="false" unbounded="false" typename="string" name="type" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;type" /><s:basetype optional="false" unbounded="false" typename="integer" name="length" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;length" /><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;scalar" optional="true" unbounded="true" wrapped="false" typename="Scalar" name="scalar" /><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;list" optional="true" unbounded="true" wrapped="false" typename="List" name="list" /><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Null" name="aNull" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;aNull"><s:elementtype><s:complextype optional="false" unbounded="false" typename="Null" name="" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Null"><s:elements /></s:complextype></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Array" name="array" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;array"><s:elementtype><s:complextype optional="false" unbounded="false" typename="Array" name="" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="dimensions" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array&gt;dimensions" /><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array&gt;name" /><s:basetype optional="false" unbounded="false" typename="string" name="type" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array&gt;type" /><s:basetype optional="false" unbounded="false" typename="string" name="base64Value" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array&gt;base64Value" /></s:elements></s:complextype></s:elementtype></s:arraytype></s:elements></s:complextype></s:elementtype></s:arraytype><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;aNull" optional="true" unbounded="true" wrapped="false" typename="Null" name="aNull" /><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;array" optional="true" unbounded="true" wrapped="false" typename="Array" name="array" /></s:elements></s:complextype></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Null" name="aNull" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;aNull"><s:elementtype><s:complextype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Null" optional="false" unbounded="false" typename="Null" name="" /></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Array" name="array" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;array"><s:elementtype><s:complextype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array" optional="false" unbounded="false" typename="Array" name="" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:elements></s:complextype></s:extensions> java.lang.String true Data 0 'text/xml' 0 output 0 'text/xml' net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 0 0 0 net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvoketestClassXMLClassMembership0output00net.sf.taverna.t2.activitieswsdl-activity0.8net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="&gt;&gt;PerformAnalysisRequest&gt;testClass" name="testClass" qname="{http://svm.genepattern.org/SVM}&gt;PerformAnalysisRequest&gt;testClass"><s:elements><s:complextype optional="false" unbounded="false" typename="ClassMembership" name="ClassMembership" qname="{gme://GenePattern.caBIG/1/gridExtensions}&gt;&gt;PerformAnalysisRequest&gt;testClass&gt;ClassMembership"><s:elements><s:arraytype optional="false" unbounded="true" wrapped="false" typename="string" name="classNames" qname="ClassMembership&gt;classNames"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype><s:basetype optional="false" unbounded="false" typename="int" name="numSamples" qname="ClassMembership&gt;numSamples" /><s:arraytype optional="false" unbounded="true" wrapped="false" typename="int" name="sampleClasses" qname="ClassMembership&gt;sampleClasses"><s:elementtype><s:basetype optional="false" unbounded="false" typename="int" name="" qname="{http://www.w3.org/2001/XMLSchema}int" /></s:elementtype></s:arraytype><s:arraytype optional="false" unbounded="true" wrapped="false" typename="string" name="sampleNames" qname="ClassMembership&gt;sampleNames"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:elements></s:complextype></s:extensions> java.lang.String true ClassMembership 0 'text/xml' 0 output 0 'text/xml' net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 0 0 0 net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokePerformeSVMparameters0parameters00attachmentList11net.sf.taverna.t2.activitieswsdl-activity0.8net.sf.taverna.t2.activities.wsdl.WSDLActivity http://node255.broadinstitute.org:6060/wsrf/services/cagrid/SVM?wsdl performAnalysis net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 0 0 0 net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvoketestDataXMLData0output00net.sf.taverna.t2.activitieswsdl-activity0.8net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="&gt;&gt;PerformAnalysisRequest&gt;testData" name="testData" qname="{http://svm.genepattern.org/SVM}&gt;PerformAnalysisRequest&gt;testData"><s:elements><s:complextype optional="false" unbounded="false" typename="Data" name="Data" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}&gt;&gt;PerformAnalysisRequest&gt;testData&gt;Data"><s:elements><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Scalar" name="scalar" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;scalar"><s:elementtype><s:complextype optional="false" unbounded="false" typename="Scalar" name="" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar&gt;name" /><s:basetype optional="false" unbounded="false" typename="string" name="type" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar&gt;type" /><s:basetype optional="false" unbounded="false" typename="string" name="value" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar&gt;value" /></s:elements></s:complextype></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="List" name="list" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;list"><s:elementtype><s:complextype optional="false" unbounded="false" typename="List" name="" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;name" /><s:basetype optional="false" unbounded="false" typename="string" name="type" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;type" /><s:basetype optional="false" unbounded="false" typename="integer" name="length" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;length" /><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Scalar" name="scalar" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;scalar"><s:elementtype><s:complextype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Scalar" optional="false" unbounded="false" typename="Scalar" name="" /></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="List" name="list" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;list"><s:elementtype><s:complextype optional="false" unbounded="false" typename="List" name="" qname="List"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;name" /><s:basetype optional="false" unbounded="false" typename="string" name="type" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;type" /><s:basetype optional="false" unbounded="false" typename="integer" name="length" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;length" /><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;scalar" optional="true" unbounded="true" wrapped="false" typename="Scalar" name="scalar" /><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;list" optional="true" unbounded="true" wrapped="false" typename="List" name="list" /><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Null" name="aNull" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;aNull"><s:elementtype><s:complextype optional="false" unbounded="false" typename="Null" name="" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Null"><s:elements /></s:complextype></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Array" name="array" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;array"><s:elementtype><s:complextype optional="false" unbounded="false" typename="Array" name="" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="dimensions" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array&gt;dimensions" /><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array&gt;name" /><s:basetype optional="false" unbounded="false" typename="string" name="type" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array&gt;type" /><s:basetype optional="false" unbounded="false" typename="string" name="base64Value" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array&gt;base64Value" /></s:elements></s:complextype></s:elementtype></s:arraytype></s:elements></s:complextype></s:elementtype></s:arraytype><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;aNull" optional="true" unbounded="true" wrapped="false" typename="Null" name="aNull" /><s:arraytype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}List&gt;array" optional="true" unbounded="true" wrapped="false" typename="Array" name="array" /></s:elements></s:complextype></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Null" name="aNull" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;aNull"><s:elementtype><s:complextype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Null" optional="false" unbounded="false" typename="Null" name="" /></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="Array" name="array" qname="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Data&gt;array"><s:elementtype><s:complextype id="{gme://RProteomics.caBIG/2.0/edu.duke.cabig.rproteomics.model.statml}Array" optional="false" unbounded="false" typename="Array" name="" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:elements></s:complextype></s:extensions> java.lang.String true Data 0 'text/xml' 0 output 0 'text/xml' net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 0 0 0 net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvoketrainingClassXMLClassMembership0output00net.sf.taverna.t2.activitieswsdl-activity0.8net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="&gt;&gt;PerformAnalysisRequest&gt;trainingClass" name="trainingClass" qname="{http://svm.genepattern.org/SVM}&gt;PerformAnalysisRequest&gt;trainingClass"><s:elements><s:complextype optional="false" unbounded="false" typename="ClassMembership" name="ClassMembership" qname="{gme://GenePattern.caBIG/1/gridExtensions}&gt;&gt;PerformAnalysisRequest&gt;trainingClass&gt;ClassMembership"><s:elements><s:arraytype optional="false" unbounded="true" wrapped="false" typename="string" name="classNames" qname="ClassMembership&gt;classNames"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype><s:basetype optional="false" unbounded="false" typename="int" name="numSamples" qname="ClassMembership&gt;numSamples" /><s:arraytype optional="false" unbounded="true" wrapped="false" typename="int" name="sampleClasses" qname="ClassMembership&gt;sampleClasses"><s:elementtype><s:basetype optional="false" unbounded="false" typename="int" name="" qname="{http://www.w3.org/2001/XMLSchema}int" /></s:elementtype></s:arraytype><s:arraytype optional="false" unbounded="true" wrapped="false" typename="string" name="sampleNames" qname="ClassMembership&gt;sampleNames"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:elements></s:complextype></s:extensions> java.lang.String true ClassMembership 0 'text/xml' 0 output 0 'text/xml' net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 0 0 0 net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeparametersXML10trainingDatatrainingDataXMLoutputparametersXML10testDatatestDataXMLoutputparametersXML10trainingClasstrainingClassXMLoutputparametersXML10testClasstestClassXMLoutputtrainingDataXMLDatatrainingDatatestClassXMLClassMembershiptestClassPerformeSVMparametersparametersXML10outputtestDataXMLDatatestDatatrainingClassXMLClassMembershiptrainingClassSVM_ResultPerformeSVMparameters Wei Tan University of Chicago and Argonne National Lab http://www.mcs.anl.gov/~wtan 2009-11-19 15:13:34.830 CST Support-Vector-Machine based data classification 2009-11-19 15:14:56.161 CST Support-Vector-Machine based data classification using genePattern SVM service, the input <data/> should be in genePattern STATML format. 2009-11-19 15:16:12.320 CST Wei Tan University of Chicago and Argonne National Lab 2009-11-19 15:13:16.906 CST Support-Vector-Machine (SVM) based data classification 2009-11-19 15:14:52.180 CST