Tutorial Workflow

Created: 2009-07-18 23:40:31

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Workflow Components

Authors (0)

Titles (0)

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Inputs (2)

Name	Description
ID
namespace

Processors (5)

Name	Type	Description
Object	biomoby	Endpoint http://moby.ucalgary.ca/moby/MOBY-Central.pl Biomoby Service Name Object Biomoby Authority Name
getGenBankFasta	biomoby	Endpoint http://moby.ucalgary.ca/moby/MOBY-Central.pl Biomoby Service Name getGenBankFasta Biomoby Authority Name bioinfo.icapture.ubc.ca Biomoby Category
Parse Moby Data(FASTA)	biomoby	Endpoint http://moby.ucalgary.ca/moby/MOBY-Central.pl
getDragonBlastText	biomoby	Endpoint http://moby.ucalgary.ca/moby/MOBY-Central.pl Biomoby Service Name getDragonBlastText Biomoby Authority Name antirrhinum.net Biomoby Category
parseDragonDBBlastText	biomoby	Endpoint http://moby.ucalgary.ca/moby/MOBY-Central.pl Biomoby Service Name parseDragonDBBlastText Biomoby Authority Name antirrhinum.net Biomoby Category

Beanshells (0)

Outputs (2)

Name	Description
moby_blast_ids
fasta_out

Datalinks (8)

Source	Sink
ID	Object:id
namespace	Object:namespace
Object:mobyData	getGenBankFasta:Object(identifier)
getGenBankFasta:FASTA(fasta)	Parse Moby Data(FASTA):mobyData('FASTA')
getGenBankFasta:FASTA(fasta)	getDragonBlastText:FASTA(sequence)
getDragonBlastText:NCBI_BLAST_Text(blast)	parseDragonDBBlastText:NCBI_BLAST_Text(blastreport)
parseDragonDBBlastText:Object(Collection - 'hit_ids')	moby_blast_ids
Parse Moby Data(FASTA):fasta_'content'	fasta_out

Coordinations (0)

Information Workflow Type

Taverna 2

Information Uploader

Nima

Information License

All versions of this Workflow are licensed under:

Information Version 2 (latest) (of 2)

Information Credits (1)

(People/Groups)

Nima

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None

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Information Favourited By (0)

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Information Statistics

403 viewings

848 downloads

[ see breakdown ]

Citations (0)

None

Version History

In chronological order:

Tutorial Workflow

Created by Nima on Saturday 18 July 2009 23:40:32 (UTC)

Last edited by Nima on Wednesday 06 February 2013 16:23:51 (UTC)
Tutorial Workflow

Created by Nima on Tuesday 05 February 2013 15:27:47 (UTC)