Workflow25EXPID00
95
2009-06-09 14:07:19.47 PDT
The experiment ID through which to query microArray data from caArray grid service.
2009-06-09 14:07:13.449 PDT
Result_CSVExtract_MicroarrayEXPID0testClass11trainingClass11testData11trainingData11net.sf.taverna.t2.activitiesdataflow-activity0.8net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
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net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokePredict_Lymphoma_TypetrainingData0testData0trainingClass0testClass0Result_CSV00net.sf.taverna.t2.activitiesdataflow-activity0.8net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
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net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
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net.sf.taverna.t2.coreworkflowmodel-impl0.8net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeExtract_MicroarrayEXPIDPreprocess_MicroarraytestDataPreprocess_MicroarraytrainingDataPredict_Lymphoma_TypetrainingDataPredict_Lymphoma_TypetestDataPredict_Lymphoma_TypetrainingClassPredict_Lymphoma_TypetestClassResult_CSV
Wei Tan
2009-06-09 14:05:23.833 PDT
Lymphoma type prediction based on microarray data
2009-06-09 14:06:18.267 PDT
Scientific value Using gene-expression patterns associated with DLBCL and FL to predict the lymphoma type of an unknown sample. Using SVM (Support Vector Machine) to classify data, and predicting the tumor types of unknown examples. Steps Querying training data from experiments stored in caArray. Preprocessing, or normalize the microarray data. Adding training and testing data into SVM service to get classification result.
2009-06-09 14:06:28.267 PDT
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