Fetch PDB flatfile from RCSB server

Created: 2009-03-08 16:23:17

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Given an identifier such as '1crn' fetches the PDB format flatfile from the RCSB

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Workflow Components

Inputs (1)

Name	Description
pdbID	PDB identifier such as '1crn'

Processors (5)

Name	Type	Description
RCSBSuffix	stringconstant
RCSBPrefix	stringconstant
FetchPage	local
AddSuffix	local
AddPrefixToID	local

Beanshells (0)

Outputs (1)

Name	Description
pdbFlatFile

Links (6)

Source	Sink
RCSBPrefix:value	AddPrefixToID:string1
pdbID	AddPrefixToID:string2
AddPrefixToID:output	AddSuffix:string1
RCSBSuffix:value	AddSuffix:string2
AddSuffix:output	FetchPage:url
FetchPage:contents	pdbFlatFile

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Information Workflow Type

Taverna 1

Information Uploader

Pvilaca

Information License

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Information Version 1 (of 1)

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Pvilaca

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Information Statistics

349 viewings

916 downloads

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Version History

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Fetch PDB flatfile from RCSB server

Created by Pvilaca on Sunday 08 March 2009 16:23:18 (UTC)

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