dataflow80Author00out1out2out3out4out5text_search_in_pubmed_sparql_endpointname0html00net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
workflow
java.lang.String
true
name
0
'text/x-taverna-web-url'
0
html
0
'text/plain,text/html'
UserNameHere
2009-01-19 18:11:14.955 EST
UserNameHere
2009-01-19 18:12:41.372 EST
UserNameHere
2009-01-19 18:06:09.865 EST
UserNameHere
2009-01-19 18:19:06.388 EST
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeNested_workflowhtml1uris22net.sf.taverna.t2.activitiesdataflow-activity0.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeFilter_List_of_Strings_by_regexregex0stringlist1filteredlist11net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
workflow
java.lang.String
true
stringlist
1
l('text/plain')
java.lang.String
true
regex
0
'text/plain'
1
filteredlist
1
l('text/plain')
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokepubmedvalue00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
pubmed.*
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokesponge_urisuri0html00net.sf.taverna.t2.activitiesdataflow-activity0.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGet_Web_Page_from_URLname0contents00net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
workflow
java.lang.String
true
name
0
'text/x-taverna-web-url'
0
contents
0
'text/plain,text/html'
UserNameHere
2009-01-19 18:44:48.796 EST
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketext_search_in_pubmed_sparql_endpointnameNested_workflowhtmlFilter_List_of_Strings_by_regexregexFilter_List_of_Strings_by_regexstringlistsponge_urisuriGet_Web_Page_from_URLnameout1out2out3out4out5
SELECT distinct ?s2
WHERE {
?s ?p ?o .
?o bif:contains "author" .
?s2 ?p2 ?s .
}
submitted at http://atlas.bio2rdf.org/sparql
SELECT ?creator, count()
WHERE {
?s1 ?p1 .
?s1 ?p2 ?o2 .
FILTER( regex(?o2, "author"))
?s1 ?creator .
}
ORDER BY DESC(count())
submitted at http://localhost:8890/sparql
2009-01-19 21:20:10.712 EST
2009-01-19 20:55:37.458 EST
SELECT ?creator, count(*)
WHERE {
?s1 ?p1 <http://bio2rdf.org/bibtex#Article> .
?s1 ?p2 ?o2 .
FILTER( regex(?o2, "Labrie"))
?s1 <http://purl.org/dc/elements/1.1/creator> ?creator .
}
ORDER BY DESC(count(*))
2009-01-19 20:55:49.331 EST
SELECT ?creator, count(*)
WHERE {
?s1 ?p1 <http://bio2rdf.org/bibtex#Article> .
?s1 ?p2 ?o2 .
FILTER( regex(?o2, "Labrie"))
?s1 <http://purl.org/dc/elements/1.1/creator> ?creator .
}
ORDER BY DESC(count(*))
followed by
SELECT ?creator, count(*)
WHERE {
?s1 ?p1 <http://bio2rdf.org/bibtex#Article> .
?s1 ?p2 ?o2 .
FILTER( regex(?o2, "Labrie"))
?s1 <http://purl.org/dc/elements/1.1/creator> ?creator .
}
ORDER BY DESC(count(*))
2009-01-19 21:02:07.150 EST
Collaborators of an author
2009-01-19 20:55:18.143 EST
Francois Belleau
2009-01-19 20:53:09.997 EST
dataflow6html11urishtml2urihtml0uris11net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
workflow
java.lang.String
true
html
0
'text/plain'
1
uris
1
l('text/plain')
UserNameHere
2009-01-17 15:33:55.266 EST
UserNameHere
2009-01-17 15:44:26.377 EST
UserNameHere
2009-01-17 15:43:51.325 EST
UserNameHere
2009-01-17 15:33:19.485 EST
UserNameHere
2009-01-17 15:32:55.969 EST
UserNameHere
2009-01-17 15:45:51.203 EST
UserNameHere
2009-01-17 15:46:39.625 EST
UserNameHere
2009-01-17 15:32:18.442 EST
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokehtml2urihtmlurisdataflow6uri00htmlsponge_uriuri0html00net.sf.taverna.t2.activitiesbeanshell-activity0.4net.sf.taverna.t2.activities.beanshell.BeanshellActivity
workflow
java.lang.String
true
uri
0
text/plain
0
html
0
text/plain
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokesponge_uriurihtml