dataflow80Author00out1out2out3out4out5text_search_in_pubmed_sparql_endpointname0html00net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity workflow java.lang.String true name 0 'text/x-taverna-web-url' 0 html 0 'text/plain,text/html' UserNameHere 2009-01-19 18:11:14.955 EST UserNameHere 2009-01-19 18:12:41.372 EST UserNameHere 2009-01-19 18:06:09.865 EST UserNameHere 2009-01-19 18:19:06.388 EST net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeNested_workflowhtml1uris22net.sf.taverna.t2.activitiesdataflow-activity0.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeFilter_List_of_Strings_by_regexregex0stringlist1filteredlist11net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity workflow java.lang.String true stringlist 1 l('text/plain') java.lang.String true regex 0 'text/plain' 1 filteredlist 1 l('text/plain') net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokepubmedvalue00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity pubmed.* net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokesponge_urisuri0html00net.sf.taverna.t2.activitiesdataflow-activity0.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGet_Web_Page_from_URLname0contents00net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity workflow java.lang.String true name 0 'text/x-taverna-web-url' 0 contents 0 'text/plain,text/html' UserNameHere 2009-01-19 18:44:48.796 EST net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketext_search_in_pubmed_sparql_endpointnameAuthorNested_workflowhtmltext_search_in_pubmed_sparql_endpointhtmlFilter_List_of_Strings_by_regexregexpubmedvalueFilter_List_of_Strings_by_regexstringlistNested_workflowurissponge_urisuriFilter_List_of_Strings_by_regexfilteredlistGet_Web_Page_from_URLnameAuthorout1text_search_in_pubmed_sparql_endpointhtmlout2Nested_workflowurisout3Filter_List_of_Strings_by_regexfilteredlistout4sponge_urishtmlout5Get_Web_Page_from_URLcontents SELECT distinct ?s2 WHERE { ?s ?p ?o . ?o bif:contains "author" . ?s2 ?p2 ?s . } submitted at http://atlas.bio2rdf.org/sparql SELECT ?creator, count() WHERE { ?s1 ?p1 . ?s1 ?p2 ?o2 . FILTER( regex(?o2, "author")) ?s1 ?creator . } ORDER BY DESC(count()) submitted at http://localhost:8890/sparql 2009-01-19 21:20:10.712 EST 2009-01-19 20:55:37.458 EST SELECT ?creator, count(*) WHERE { ?s1 ?p1 <http://bio2rdf.org/bibtex#Article> . ?s1 ?p2 ?o2 . FILTER( regex(?o2, "Labrie")) ?s1 <http://purl.org/dc/elements/1.1/creator> ?creator . } ORDER BY DESC(count(*)) 2009-01-19 20:55:49.331 EST SELECT ?creator, count(*) WHERE { ?s1 ?p1 <http://bio2rdf.org/bibtex#Article> . ?s1 ?p2 ?o2 . FILTER( regex(?o2, "Labrie")) ?s1 <http://purl.org/dc/elements/1.1/creator> ?creator . } ORDER BY DESC(count(*)) followed by SELECT ?creator, count(*) WHERE { ?s1 ?p1 <http://bio2rdf.org/bibtex#Article> . ?s1 ?p2 ?o2 . FILTER( regex(?o2, "Labrie")) ?s1 <http://purl.org/dc/elements/1.1/creator> ?creator . } ORDER BY DESC(count(*)) 2009-01-19 21:02:07.150 EST Collaborators of an author 2009-01-19 20:55:18.143 EST Francois Belleau 2009-01-19 20:53:09.997 EST dataflow6html11urishtml2urihtml0uris11net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity workflow java.lang.String true html 0 'text/plain' 1 uris 1 l('text/plain') UserNameHere 2009-01-17 15:33:55.266 EST UserNameHere 2009-01-17 15:44:26.377 EST UserNameHere 2009-01-17 15:43:51.325 EST UserNameHere 2009-01-17 15:33:19.485 EST UserNameHere 2009-01-17 15:32:55.969 EST UserNameHere 2009-01-17 15:45:51.203 EST UserNameHere 2009-01-17 15:46:39.625 EST UserNameHere 2009-01-17 15:32:18.442 EST net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokehtml2urihtmlhtmlurishtml2uriurisdataflow6uri00htmlsponge_uriuri0html00net.sf.taverna.t2.activitiesbeanshell-activity0.4net.sf.taverna.t2.activities.beanshell.BeanshellActivity workflow java.lang.String true uri 0 text/plain 0 html 0 text/plain net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokesponge_uriuriurihtmlsponge_urihtml