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2015-10-17 09:16:38.721 UTC
>KF744407
atgaataaccaacgaaaaaaggcgagaaaaacgcctttcaatatgctgaaacgcgagagaaaccgcgtgtcaactgtgcagcagctgacaaagagattctcacttggaatgctgcagggacgaggaccattgaaactgttcatggccctggtggcattccttcgtttcctaacaatcccgccaacagcagggatattaaaaagatggggaacaatcaaaaaatcaaaggctatcaatgtcttgagagggttcaggaaagagattggaaggatgctgaacatcttgaacaggagacgcagaactgcaggtgtgatcatcatgatgattccaacagtggtggcgttccatttaaccacacgcaacggagaaccacacatgatcgtcagtagacaagagaaagggaaaagtcttctgtttaaaacagagaacggtgtgaacatgtgtaccctcatggccttggaccttggtgaattgtgtgaagacacaatcacttataattgtcctcttctcaggcagaatgaaccagaagacatagactgttggtgcaactctacgtctacatgggtaacttatgggacatgcaccgccacaggagaacacagaagggaaaaaagatcagtggcactcgttccacatgtgggaatgggactggagacacgaactgaaacatggatgtcatcagaaggggcctggaaacatgctcagagaatcgaaacttgggtcttgagacatccaggctttaccataatggcagcaatcctggcatacaccataggaacgacatatttccaaagagtcctgattttcatcttactgacagctgtcgctccttcaatgacaatgcgttgtataggaatatcaaatagagactttgtggaaggggtttcaggaggaagctgggttgacatagtcttagaacatggaagctgtgtgacgacgatggcgaaaaataaaccaacattggattttgaactgacaaaaacggaagccaaacatcccgccactttaaggaagtattgtatagaggcaaagctgaccaacacaacaacagcatctcgctgcccaacacaaggagaacccagcctaaatgaagaacaggacaaaaggtttgtctgcaaacactccatggtagacagaggatggggaaatggatgcggattatttggaaagggaggcatcgtgacctgtgcaatgttcacatgcaaaaagaacatggaaggaaaaatcgtgcaaccagaaaacttggagtacaccattgtgataacacctcactcaggggaagagaatgcagtcggaaatgacacaggaaaacacggcaaggaaattaaagtaacaccacagagttccattacagaagcagaactgacaggctatggcactgtcacgatggaatgctctccgagaacgggcctcgactttaatgagatggtgttgctgcaaatggaagacaaggcttggctggtgcacaggcagtggttcttagaccttccgttaccatggctgcccggagcagacacacaaggatcaaattggatacagaaggagacattggtcactttcaaamatccccatgcgaagaaacaggatgttgtcgttttaggatcccaagaaggggctatgcatacagcactcacaggggccacggaaatccagatgtcatcaggaaacttactgttcacaggacatcttaagtgcaggctgagaatggacaaactacagctcaaaggaatgtcatattctatgtgtacaggaaagtttaaagttgtgaaggaaatagcagaaacacaacatggaacaatagttatcagagtacaatatgaaggggacggttctccgtgcaagatcccttttgaaataatggatttggaaaaaagacatgtcttaggtcgcttgatcacagtcaacccaattgttgcagaaaaagacagcccagtcaacatagaagcagaacctccattcggagacagttacatcattataggagtagaaccgggacaactgaagctcagctggtttaagaaaggaagttctattggccaaatgtttgagacaacaatgagaggagcgaagagaatggccatcttaggtgacacagcttgggattttggatccctgggaggagtgttcacatctataggaaaggccctccaccaagtctttggagcaatctatggggctgcctttagcggggtttcatggactatgaaaatcctcataggagtcgtcatcacatggataggaatgaattcacgcagcacctcactgtctgtgtcactagtattagtgggggtcgtgacattgtatttgggagtcatggtgcaggccgatagtggttgcgttgtgagttggagaaacaaagaactgaaatgtggtagtgggatttttatcacagacaacgtgcacacatggacagaacaatacaaattccaaccagaatccccttcaaagctggcttcagctatccagaaggctcatgaagagggcatttgtggaatccgctcagtaacaagattggagaatctgatgtggaaacaaataacaccagaactgaatcacattctatcagaaaatgaggtaaaattgactatcatgacaggagacattaaaggaatcatgcaggcaggaaaacgatccctgcggccccaacccactgagctgaagtactcttggaaagcatggggcaaagcgaaaatgctctccacagagcttcataaccacacctttctcattgatggccccgaaacagcagaatgtcccaacacaaacagagcttggaactcactagaagttgaagactatggctttggagtattcaccaccaacatatggctgaaactgaaagaaaggcaggatgtattttgtgactcaaaactcatgtcagcagccataagagacaacagggccgtccacgccgatatgggttattggatagaaagcgcacttaatgacacatggaagattgagaaagcctcttttattgaagttaaaagctgccactggccaaagtcacacactctctggagtaatggagtgctagaaagtgagatgataattccaaagaattttgcaggaccagtgtcacagcacaactacagaccaggctatcatacacaaacggcaggaccctggcatctaggtaagcttgagatggactttgatttctgcgaaggaaccacagtggtagtgactgaggactgtggaaatagaggaccctctttaagaacaactactgcttctggaaaactcataacagaatggtgctgccgatcttgcacattaccaccgctaaggtacagaggtgaggatggatgctggtatggaatggaaatcaggccattgaaagagaaagaagagaacttggtcaactctttggtcacagccggacttggacagattgacaacttctcactaggagtcttgggaatggcattgttcctggaagaaatgctcaggacccgcgtaggaacgaaacatgcaatattgctagttgcagtttctttcgtgacattgatcacagggaacatgtcttttcgagatttggggagagtgatggttatggtgggcgctactatgacggatgacataggcatgggcgtgacttatcttgccctattagcagccttcaaagtcagaccaacttttgcagctggactactcttgagaaagctgacctccaaggaattaatgatgaccaccataggaatcgtactcctctctcagagcaccataccagagactatacttgaactgactgacgcgctggctttggggatgatggttctcaaaatagtgagaaacatggaaaagtatcaactagcagtgactatcatggccatcttgtgcgtcccaaatgcagtgatattacaaaacgcatggaaagtgagctgcacaacactggcagtggtgtccgtttccccactgcttttaacatcctcacagcagaaagcagattggataccactggcgttgacgatcaaaggcctcaatccaacagccattttcttaacaaccctctcaagaactagcaagaaaaggagctggccactaaatgaggctattatggcagtcgggatggtgagcattttagccagttctctcttaaagaatgatattcccatgacaggaccattagtagctggagggcttctcactgtgtgttacgtgctcactggaagatcggctgatttggaactggagagagctgctgacgtaagatgggaagaacaggcagagatatcaggaagtagtccaattctgtcaataacaatatcggaagatggtagcatgtcgataaaaaatgaagaagaagaacaaacactgaccatactcattaggacaggactgctggtgatatcaggactttttcccgtgtcaataccaatcacggcagctgcatggtacctgtgggaagtgaaaaaacaacgagccggagtattgtgggatgtcccttcacccccacctgtgggaaaggccgaactggaagatggagcctatagaatcaagcagaaagggattctaggatactcgcagatcggggctggagtttacaaagaaggaacattccacacaatgtggcacgtcacacgcggtgctgtcctaatgcataaagggaagagaattgaaccatcatgggcggacgtcaagaaagacctaatatcgtatggaggaggctggaagctagaaggagaatggaaggaaggagaagaagtccaggtcctggcattagagcctggaaagaatccaagagccgtccaaacaaaacccggtctcttcaaaactaacactggaaccataggcgccgtatctctggacttttctcctggaacgtcaggatctccaatcgtcgacaaaaaaggaaaagttgtgggcctttatggcaacggcgtcgtcacaaggagtggaacatatgtgagtgccatagcccagactgaaaaaagcattgaagataatccagagattgaagatgacatctttcgaaagaaaagattgaccatcatgga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>KF744408
atgaataaccaacgaaaaaaggcgagaaaaacgcctttcaatatgctgaaacgcgagagaaaccgcgtgtcaactgtgcagcagctgacaaagagattctcacttggaatgctgcagggacgaggaccattgaaactgttcatggccctggtggcattccttcgtttcctaacaatcccgccaacagcagggatattaaaaagatggggaacaatcaaaaaatcaaaggctatcaatgtcttgagagggttcaggaaagagattggaaggatgctgaacatcttgaacaggagacgcagaactgcaggtgtgatcatcatgatgattccaacagtggtggcgttccatttaaccacacgcaacggagaaccacacatgatcgtcagtagacaagagaaagggaaaagtcttctgtttaaaacagagaacggtgtgaacatgtgtaccctcatggccttggaccttggtgaattgtgtgaagacacaatcacttataattgtcctcttctcaggcagaatgaaccagaagacatagactgttggtgcaactctacgtctacatgggtaacttatgggacatgcaccgccacaggagaacacagaagggaaaaaagatcagtggcactcgttccacatgtgggaatgggactggagacacgaactgaaacatggatgtcatcagaaggggcctggaaacatgctcagagaatcgaaacttgggtcttgagacatccaggctttaccataatggcagcaatcctggcatacaccataggaacgacatatttccaaagagtcctgattttcatcttactgacagctgtcgctccttcaatgacaatgcgttgtataggaatatcaaatagagactttgtggaaggggtttcaggaggaagctgggttgacatagtcttagaacatggaagctgtgtgacgacgatggcgaaaaataaaccaacattggattttgaactgacaaaaacggaagccaaacatcccgccactttaaggaagtattgtatagaggcaaagctgaccaacacaacaacagcatctcgctgcccaacacaaggagaacccagcctaaatgaagaacaggacaaaaggtttgtctgcaaacactccatggtagacagaggatggggaaatggatgcggattatttggaaagggaggcatcgtgacctgtgcaatgttcacatgcaaaaagaacatggaaggaaaaatcgtgcaaccagaaaacttggagtacaccattgtgataacacctcactcaggggaagagaatgcagtcggaaatgacacaggaaaacacggcaaggaaattaaagtaacaccacagagttccattacagaagcagaactgacaggctatggcactgtcacgatggaatgctctccgagaacgggcctcgactttaatgagatggtgttgctgcaaatggaagacaaggcttggctggtgcacaggcagtggttcttagaccttccgttaccatggctgcccggagcagacacacaaggatcaaattggatacagaaggagacattggtcactttcaaamatccccatgcgaagaaacaggatgttgtcgttttaggatcccaagaaggggctatgcatacagcactcacaggggccacggaaatccagatgtcatcaggaaacttactgttcacaggacatcttaagtgcaggctgagaatggacaaactacagctcaaaggaatgtcatattctatgtgtacaggaaagtttaaagttgtgaaggaaatagcagaaacacaacatggaacaatagttatcagagtacaatatgaaggggacggttctccgtgcaagatcccttttgaaataatggatttggaaaaaagacatgtcttaggtcgcttgatcacagtcaacccaattgttgcagaaaaagacagcccagtcaacatagaagcagaacctccattcggagacagttacatcattataggagtagaaccgggacaactgaagctcagctggtttaagaaaggaagttctattggccaaatgtttgagacaacaatgagaggagcgaagagaatggccatcttaggtgacacagcttgggattttggatccctgggaggagtgttcacatctataggaaaggccctccaccaagtctttggagcaatctatggggctgcctttagcggggtttcatggactatgaaaatcctcataggagtcgtcatcacatggataggaatgaattcacgcagcacctcactgtctgtgtcactagtattagtgggggtcgtgacattgtatttgggagtcatggtgcaggccgatagtggttgcgttgtgagttggagaaacaaagaactgaaatgtggtagtgggatttttatcacagacaacgtgcacacatggacagaacaatacaaattccaaccagaatccccttcaaagctggcttcagctatccagaaggctcatgaagagggcatttgtggaatccgctcagtaacaagattggagaatctgatgtggaaacaaataacaccagaactgaatcacattctatcagaaaatgaggtaaaattgactatcatgacaggagacattaaaggaatcatgcaggcaggaaaacgatccctgcggccccaacccactgagctgaagtactcttggaaagcatggggcaaagcgaaaatgctctccacagagcttcataaccacacctttctcattgatggccccgaaacagcagaatgtcccaacacaaacagagcttggaactcactagaagttgaagactatggctttggagtattcaccaccaacatatggctgaaactgaaagaaaggcaggatgtattttgtgactcaaaactcatgtcagcagccataagagacaacagggccgtccacgccgatatgggttattggatagaaagcgcacttaatgacacatggaagattgagaaagcctcttttattgaagttaaaagctgccactggccaaagtcacacactctctggagtaatggagtgctagaaagtgagatgataattccaaagaattttgcaggaccagtgtcacagcacaactacagaccaggctatcatacacaaacggcaggaccctggcatctaggtaagcttgagatggactttgatttctgcgaaggaaccacagtggtagtgactgaggactgtggaaatagaggaccctctttaagaacaactactgcttctggaaaactcataacagaatggtgctgccgatcttgcacattaccaccgctaaggtacagaggtgaggatggatgctggtatggaatggaaatcaggccattgaaagagaaagaagagaacttggtcaactctttggtcacagccggacttggacagattgacaacttctcactaggagtcttgggaatggcattgttcctggaagaaatgctcaggacccgcgtaggaacgaaacatgcaatattgctagttgcagtttctttcgtgacattgatcacagggaacatgtcttttcgagatttggggagagtgatggttatggtgggcgctactatgacggatgacataggcatgggcgtgacttatcttgccctattagcagccttcaaagtcagaccaacttttgcagctggactactcttgagaaagctgacctccaaggaattaatgatgaccaccataggaatcgtactcctctctcagagcaccataccagagactatacttgaactgactgacgcgctggctttggggatgatggttctcaaaatagtgagaaacatggaaaagtatcaactagcagtgactatcatggccatcttgtgcgtcccaaatgcagtgatattacaaaacgcatggaaagtgagctgcacaacactggcagtggtgtccgtttccccactgcttttaacatcctcacagcagaaagcagattggataccactggcgttgacgatcaaaggcctcaatccaacagccattttcttaacaaccctctcaagaactagcaagaaaaggagctggccactaaatgaggctattatggcagtcgggatggtgagcattttagccagttctctcttaaagaatgatattcccatgacaggaccattagtagctggagggcttctcactgtgtgttacgtgctcactggaagatcggctgatttggaactggagagagctgctgacgtaagatgggaagaacaggcagagatatcaggaagtagtccaattctgtcaataacaatatcggaagatggtagcatgtcgataaaaaatgaagaagaagaacaaacactgaccatactcattaggacaggactgctggtgatatcaggactttttcccgtgtcaataccaatcacggcagctgcatggtacctgtgggaagtgaaaaaacaacgagccggagtattgtgggatgtcccttcacccccacctgtgggaaaggccgaactggaagatggagcctatagaatcaagcagaaagggattctaggatactcgcagatcggggctggagtttacaaagaaggaacattccacacaatgtggcacgtcacacgcggtgctgtcctaatgcataaagggaagagaattgaaccatcatgggcggacgtcaagaaagacctaatatcgtatggaggaggctggaagctagaaggagaatggaaggaaggagaagaagtccaggtcctggcattagagcctggaaagaatccaagagccgtccaaacaaaacccggtctcttcaaaactaacactggaaccataggcgccgtatctctggacttttctcctggaacgtcaggatctccaatcgtcgacaaaaaaggaaaagttgtgggcctttatggcaacggcgtcgtcacaaggagtggaacatatgtgagtgccatagcccagactgaaaaaagcattgaagataatccagagattgaagatgacatctttcgaaagaaaagattgaccatcatggacctccacccaggggcgggaaaaacgaagagataccttccagcaatagtcagagaagccataaaacgaggcttgaggacactaatcctggcccccactagagttgtggcggctgaaatggaagaagctctcagaggacttccaataagataccaaacccccgccatcagagctgagcacactgggcgggagattgtggatctaatgtgtcacgccacatttaccatgaggctgctatccccaattagagtaccaaattacaacctgatcatcatggatgaagcccatttcacagacccagcaagcatagcagctagaggatacatttcaactcgagttgagatgggtgaagcagctgggattttcatgacagctactcctcctggaagcagagacccatttcctcagagcaatgcaccaatcatggatgaagaaagggaaatccctgagcgttcgtggaattctggacatgaatgggttacggattttaaagggaagactgtttggtttgttccaagtataaaagcaggaaatgatatagcagcttgcctgagaaagaatggaaagaaagtgatacaactcagcaggaagacctttgattctgaatatgtcaagactaggaccaatgattgggactttgtggtcacgacagacatttcagaaatgggcgctaacttcaaggctgagagggttatagaccccaggcgctgcatgaaaccagtcatactaacagacggtgaagagcgggtgatcctggcaggacccatgccagtgacccactctagtgcagcacaaagaagagggagagtaggaagaaatccaaaaaatgaaaatgaccagtacatatacatgggggaacctctggaaaatgatgaagactgtgcacactggaaagaagctaagatgcttctagataacatcaacacgcccgaaggaatcattcccagtatgttcgaaccagagcgtgaaaaggtggatgccattgatggtgaataccgcttaagaggagaagcgaggaaaacttttgtggacctaatgagaagaggagacctaccagtctggctagcctacagagtggcagctgaaggtatcaactacgcagacagaagatggtgctttgatggagtcaagaacaatcaaatcttggaagaaaatgtggaagtggaaatttggacaaaagaaggagaaaggaagaaattaaaacccagatggttggatgctaggatctactctgacccactggcgctcaaagaattcaaggaattcgcagctggaagaaagtccctgaccctgaatctaatcacagagatgggtaggctcccaaccttcatgacccagaaagcaaggaacgcactagacaacttagcagtcctgcatacggctgaagcaggcggaagggcgtacaatcatgctcttagtgaactgccggagaccctggagacattgcttttactgacactcttggccacagtcacgggcggaatcttcctattcttgatgagcggaaaaggcatagggaagatgaccctgggaatgtgctgcataatcacggccagtgttctcctatggtatgcacaaatacagccacactggatagcagcttcaataatactggagttttttctcatagtcttgctcattccagaaccagaaaagcagagaacaccccaagataaccaattaacttatgttgtcatagccatccttacagtggtggccgcaaccatggcaaacgagatgggtttcctggaaaaaacaaagaaagacttcggattgggaagcattgcaacccagcaacctgagagcaacatcctggacatagatctacgtcctgcatcagcttggactctatatgctgtggcaacaactttcatcacaccaatgctgagacacagcattgaaaattcctcagtgaatgtgtctctaacggccattgccaaccaagccacagttttaatgggtcttgggaaaggatggccattgtcaaaaatggacatcggagttccccttctcgctatcgggtgctattcacaagttaaccccataactctcacggcagcccttctcttattggtagcacattatgccatcatagggccaggactccaagcgaaagcaactagagaagctcagaaaagagcagcagcgggcatcatgaaaaacccaactgtggatggaataacagtgattgacctagattcaataccctatgatccaaagtttgaaaagcagttgggacaagtaatgctcctagtcctctgcgtgactcaagtattgatgatgaggactacatgggctttgtgtgaagctctaaccttagcgactgggcccatctccacactgtgggaaggaaatccagggagattttggaatacaactattgcagtatcaatggctaacatttttagagggagctacctggccggagccggacttctcttttctatcatgaagaatacggccaacacaagaaggggaactggcaacacaggagagacgcttggagaaaaatggaaaaaccgattgaatgcattggggaagagtgaatttcagatctataagaaaagtggaatccaggaggtggatagaaccttagcaaaagaaggcatcaaaagaggagaaacggaccatcacgctgtgtcgcgaggctcggcgaaactgagatggttcgtcgagagaaacctggtcacaccagaagggaaagtaatggacctcggttgcggcagggggggctggtcatactattgtgggggactaaagaatgtaaaagaagtcaaaggcctaacaaaaggaggaccaggacacgaagaacccattcccatgtcaacatatggttggaacctggtgcgtcttcaaagtggagttgatgttttttttactccgccagaaaagtgtgacacactactgtgtgacataggggagtcgtcaccaaaccccacggttgaggcaggacgaacactcagagttctaaacctagtggaaaattggctgaacaacaacacccaattttgcatcaaggttctcaacccatatatgccctcagttatagaaaaaatggaagcgctgcaaaggaaatacggaggagctttggtgaggaatccactctcacgaaattccacacacgagatgtactgggtatccaatgcttccgggaacatagtgtcatcagtgaacatgatttcaagaatgttgattaacaggttcacaatgagacataagaaggccacatacgagccagatgttgacctcggaagcggaacccgcaacatcggaattgaaagtgagataccaaatttggacataattgggaaaagaatagaaaaaataaaacaagagcatgaaacatcatggcactatgaccaggaccacccatacaaaacgtgggcctaccatggcagctacgaaacaaaacagactggatcggcatcatccatggtgaacggagtggttaggctgctaacaaaaccttgggacgtcatccctatggtgacacagatggcaatgacagacacgactccatttggacaacagcgcgttttcaaagagaaagtggacacgagaacccaagaaccgaaagaaggcacgaaaaaactaatgaaaatcacggcagaatggctctggaaagaattaggaaagaaaaagacacctaggatgtgcaccagagaagaattcacaagaaaggtgagaagcaatgcagccttaggcgccatattcactgatgagaacaagtggaagtcggcacgtgaggctgttgaagatagtggattttgggaactggttgacaaggaaaggaatcttcatcttgaaggaaagtgtgagacatgtgtgtataacatgatgggaaagagagagaagaagctaggggagttcggcaaagcaaaaggcagcagagccatatggtacatgtggcttggagcacgcttcttagagtttgaagccctaggattcttgaatgaagatcactggttttccagagagaactccctgagtggagtggaaggagaagggctgcacaaactaggctacattttaagagacgtgagcaagaaagaaggaggagcaatgtacgccgatgacacmgcagsatgggacacaagaatcacactagaggacttaaaaaatgaagaaatggtgacaaaccacatggaaggagaacacaagaaacttgctgaagccattttcaaattaacgtaccaaaacaaggtggtgcgtgtgcaaagaccaacaccaagaggcacagtaatggacattatatcgagaagagaccaaagaggtagcggacaagttgtcacctacggcctcaatactttcaccaacatggaagcccaactgatcagacagatggagggagaaggagtcttcaaaagcatccagcacctgacagtcacagaagaaattgcagtgaaaaactggttagcaagagtggggcgtgagaggttatcaagaatggctatcagtggagatgattgtgttgtgaaacccttagatgataggtttgcaagcgctctaacagctctaaatgacatgggaaaagttaggaaagacatacaacaatgggaaccttcaagaggatggaacgattggacacaagtgcccttttgttcacaccatttccatgagwtaatcatgaaggacggtcgcgtactcgtagttccatgcagaaaccaagatgaactgattggtagggcccgaatttcccagggagccgggtggtctttgcgggaaacagcctgtttggggaagtcttacgcccaaatgtggagcctgatgtacttccacagacgtgaccttaggctggcggcaaatgccatttgctcggcagtcccatcacattgggttccaacaagtcgaacaacttggtccatacatgccacacatgagtggatgacaacagaagatatgctgacagtctggaacagggtgtggattcaagaaaacccatggatggaagacaaaactccagtagaatcatgggaggaaatcccatatttggggaaaagagaagaccaatggtgcggctcattgatcgggctaacaagcagggccacttgggcaaagaacatccaaacagcaataaatcaagttagatccctaataggcaatgaggaatacacggactacatgccatccatgaaaaggttcagaagagaagaggaagaggcaggagtcttgtggtag
>JN697058
ATGAACAACCAACGAAAAAAGACGGCTCGACCGTCTTTCAATATGCTGAAACGCGCGAGAAACCGCGTGT
CAACTGTTTCACAGTTGGCGAAGAGATTCTCAAAAGGATTGCTCTCAGGCCAAGGACCCATGAAACTGGT
GATGGCTTTCATAGCATTCCTAAGATTTCTAGCCATACCCCCAACAGCAGGAATTTTGGCTAGATGGGGC
TCATTCAAGAAGAACGGAGCGATCAAAGTGCTACGGGGTTTCAAGAAAGAAATCTCAAACATGTTGAATA
TAATGAATAGAAGGAAAAGATCTGTGACCATGCTCCTTATGCTGATGCCCACAGCCTTGGCGTTCCATTT
GACTACACGAGGGGGAGAGCCGCACATGATAGTCAGCAAGCAGGAAAGAGGAAAGTCACTTTTGTTTAAG
ACCTCAGCAGGTGTCAACATGTGCACCCTTATAGCGATGGATTTGGGAGAGTTATGTGAGGACACAATGA
CTTACAAATGCCCTAGAATCACTGAGGCGGAACCAGATGACGTTGATTGTTGGTGCAATGCCACAGACAC
ATGGGTGACCTATGGAACATGTTCCCAAACTGGCGAGCACCGACGAGACAAACGTTCCGTCGCACTGGCC
CCACACGTGGGACTTGGTTTGGAAACAAGAACCGAAACGTGGATGTCCTCCGAAGGCGCTTGGAAACAGA
TACAAAGAGTGGAGACTTGGGCCCTGAGACACCCAGGATTCACGGTGATAGCTCTCTTTCTAGCACATGC
CATAGGAACATCTATCACCCAGAAAGGGATTATCTTCATTTTGTTAATGCTGGTTACACCATCCATGGCC
ATGCGATGCGTGGGAATAGGCAGCAGGGACTTCGTGGAAGGACTGTCAGGAGCAACTTGGGTAGATGTGG
TGCTGGAACATGGAAGTTGCGTCACTACCATGGCAAAAGACAAACCAACATTGGACATTGAACTCTTGAA
GACGGAAGTCACAAACCCTGCCGTCCTGCGCAAACTGTGCATTGAAGCTAAAATATCAAACACCACCACC
GACTCAAGATGTCCAACACAAGGAGAAGCCACACTGGTGGAAGAACAAGACGCGAACTTTGTGTGTCGAC
GAACGTTTGTGGACAGAGGCTGGGGCAATGGCTGTGGGCTCTTCGGAAAAGGAAGCCTTATAACGTGTGC
TAAGTTCAAGTGTGTGACAAAACTGGAAGGAAAAATAGTTCAATATGAAAACTTGAAATATTCAGTAATA
GTCACCGTCCACACTGGAGACCAGCACCAGGTGGGAAATGAAAGCACAGAACATGGGACAACTGCAACTA
TAACACCTCAAGCTCCTACGACGGAAATACAGCTGACCGACTACGGAGCTCTTACATTGGATTGTTCACC
TAGAACAGGACTAGACTTCAATGAAATGGTGTTGTTGACAATGAAAGAAAAATCATGGCTAGTCCACAAA
CAATGGTTTCTAGACCTACCACTGCCTTGGACCTCGGGAGCTTCAACATCACAAGAAACTTGGAACAGAC
AAGATTTGCTGGTGACATTTAAGACAGCTCATGCAAAGAAGCAGGAAGTAGTCGTACTAGGATCACAAGA
AGGAGCAATGCACACTGCGTTGACCGGAGCGACAGAAATCCAAACGTCTGGAACGACAACAATTTTTGCA
GGACACTTGAAATGTAGACTAAAGATGGACAAATTGACTCTAAAAGGGATGTCATATGTGATGTGCACAG
GCTCATTCAAGCTAGAGAAAGAAGTGGCTGAGACCCAGCATGGAACCGTTCTAGTGCAGATTAAATACGA
AGGAACAGATGCACCATGCAAGATCCCTTTTTTGACCCAAGATGAAAAAGGAGTAACCCAGAATGGGAGA
TTGATAACAGCCAACCCCATAGTCACTGACAAAGAAAAACCAGTCAACATTGAGGCAGAACCGCCTTTTG
GTGAGAGTTACATCGTGATAGGAGCAGGTGAAAAAGCTTTGAAACTAAGCTGGTTCAAGAAAGGAAGCAG
CATAGGGAAGATGTTTGAGGCAACTGCCAGAGGAGCACGAAGGATGGCCATACTGGGAGACACCGCATGG
GACTTTGGTTCTATAGGAGGAGTGTTCACGTCTGTTGGAAAATTAGTACACCAGATTTTTGGAACTGCAT
ATGGAGTTTTGTTCAGCGGTGTTTCCTGGACCATGAAAATAGGAATAGGGGTTCTGCTGACATGGCTAGG
ATTAAACTCAAGGAGCACGTCCCTTTCGATGACGTGCATTGCAGTTGGCCTGGTAACGCTATACTTAGGA
GTCATGGTTCAGGCGGATTCAGGATGTGTAATTAATTGGAAAGGTAGAGAACTCAAATGTGGAAGTGGCA
TTTTTGTCACCAATGAAGTTCACACTTGGACAGAGCAATACAAATTTCAAGCTGATTCCCCAAAGAGGCT
ATCAGCAGCCATTGGGAAGGCATGGGAGGAGGGTGTGTGTGGAATTCGATCAGCAACTCGTCTCGAGAAC
ATCATGTGGAAGCAAATATCAAATGAATTGAACCACATCTTACTTGAAAATGATATGAAATTCACAGTGG
TTGTAGGAGATGTTGCTGGGATCTTGGCTCAAGGGAAAAAAATGATTAGGCCACAACCCATGGAATACAA
ATACTCGTGGAAAAGCTGGGGAAAGGCTAAAATCATAGGGGCAGATGTACAGAACACCACCTTCATCATC
GACGGCCCAAACACCCCAGAATGCCCTGATGATCAAAGAGCGTGGAACATTTGGGAAGTTGAGGATTATG
GATTTGGAATTTTCACGACAAACATATGGCTGAAATTGCGTGACTCCTACACCCAAGTGTGTGACCACCG
GCTAATGTCAGCCGCCATCAAGGACAGCAAGGCAGTTCACGCTGACATGGGGTACTGGATAGAAAGTGAA
AAGAACGAGACCTGGAAGCTGGCAAGAGCCTCTTTCATAGAAGTCAAAACATGTATCTGGCCAAAATCCC
ACACTCTATGGAGCAATGGAGTTCTGGAAAGTGAAATGATAATTCCAAAGATCTATGGAGGACCAACATC
TCAGCACAACTACAGACCAGGATATTTCACACAAACGGCAGGGCCGTGGCACCTAGGCAAGTTGGAACTG
GATTTTGATTTGTGTGAGGGTACCACAGTTGTTGTGGATGAACATTGTGGAAATCGAGGACCATCTCTTA
GGACCACAACAGTCACAGGAAAGATAATTCATGAATGGTGTTGCAGATCTTGTACGCTGCCACCCTTACG
TTTCAGAGGAGAAGATGGGTGCTGGTACGGTATGGAAATCAGACCAGTCAAGGAAAAGGAAGAGAATCTA
GTCAAGTCAATGGTCTCTGCAGGGTCAGGGGAAGTGGACAGCTTTTCACTAGGACTGCTATGCATATCAA
TAATGATCGAAGAGGTGATGAGATCCAGATGGAGTAGAAAAATGCTGATGACTGGAACACTGGCTGTGTT
CTTCCTTCTCATAATGGGACAATTGACATGGAATGATCTGATCAGATTATGCATCATGGTCGGAGCCAAC
GCTTCCGACAGGATGGGGATGGGAACGACGTACCTAGCTCTGATGGCCACTTTTAAAATGAGACCAATGT
TTGCTGTAGGGCTACTATTCCGCAGACTAACATCCAGAGAAGTTCTTCTTCTAACAATTGGATTGAGTCT
AGTGGCATCTGTGGAGTTACCAAATTCCTTGGAGGAGCTGGGGGATGGACTTGCAATGGGCATTATGATT
TTAAAACTATTGACTGATTTTCAATCACATCAGCTGTGGGCTACCTTGCTGTCCTTGACATTCATCAAAA
CAACGTTTTCCTTGCACTATGCATGGAAGACAATGGCTATGGTACTGTCAATTGTATCTCTCTTCCCCTT
ATGCCTGTCCACGACCTCCCAAAAAACAACATGGCTTCCGGTGCTATTGGGATCTCTTGGATGCAAACCA
CTAACCATGTTTCTTATAGCGGAAAACAAAATCTGGGGAAGGAAAAGTTGGCCCCTCAATGAAGGAATCA
TGGCTGTTGGAATAGTCAGCATCCTACTAAGTTCACTCCTCAAAAATGATGTGCCGCTAGCTGGGCCACT
AATAGCTGGAGGCATGCTAATAGCATGTTATGTTATATCTGGAAGCTCAGCCGATCTATCACTAGAGAAA
GCGGCTGAGGTCTCCTGGGAAGAAGAAGCAGAACACTCTGGTGCCTCACACAACATATTAGTGGAGGTCC
AGGATGATGGAACCATGAAGATAAAGGATGAAGAGAGAGATGACACGCTAACCATTCTCCTTAAAGCAAC
TCTGCTAGCAGTTTCAGGGGTGTACCCATTATCAATACCAGCGACCCTTTTTGTGTGGTACTTTTGGCAG
AAAAAGAAACAGAGATCTGGAGTGTTATGGGACACACCTAGCCCTCCAGAAGTGGAAAGAGCAGTTCTTG
ATGATGGTATCTATAGAATCATGCAGAGAGGACTGTTGGGCAGGTCCCAAGTAGGGGTAGGAGTTTTTCA
AGAAAACGTGTTCCACACAATGTGGCATGTCACCAGGGGAGCTGTACTCATGTATCAAGGGAAGAGACTG
GAACCGAGCTGGGCCAGTGTCAAAAAAGACCTGATCTCATATGGAGGAGGTTGGAGGCTTCAAGGATCCT
GGAACACGGGAGAAGAAGTGCAGGTGATTGCTGTTGAACCAGGGAAGAACCCCAAAAATGTACAAACAGC
GCCGGGCACCTTTAAGACCCCTGAAGGCGAAGTTGGAGCCATTGCCCTAGATTTTAAACCCGGCACATCT
GGATCTCCCATCGTGAACAGAGAAGGAAAAATAGTAGGCCTTTATGGAAATGGAGTAGTGACAACAAGTG
GAACCTACGTCAGTGCCATAGCCCAAGCTAAAGCATCACAGGAAGGGCCCCTACCAGAGATTGAAGACGA
GGTGTTTAGGAAAAGAAACTTAACAATAATGGACCTACATCCAGGATCGGGGAAAACAAGAAGATACCTT
CCAGCCATAGTCCGTGAGGCCATAAAAAGGAAGCTGCGCACACTAATTCTGGCTCCCACAAGGGTTGTCG
CTTCCGAAATGGCAGAGGCGCTCAAGGGAATGCCAATAAGGTACCAAACAACAGCAGTGAAGAGTGAACA
CACAGGAAAAGAGATAGTTGACCTCATGTGTCACGCCACTTTCACCATGCGCCTCCTGTCTCCCGTGAGA
GTTCCCAATTACAACATGATTATCATGGATGAAGCACATTTCACCGATCCATCCAGCATAGCGGCTAGAG
GGTACATCTCAACTCGAGTGGGCATGGGTGAAGCAGCTGCGATCTTCATGACAGCCACTCCCCCAGGATC
AGTGGAGGCCTTTCCACAGAGCAACGCAGTTATCCAAGATGAGGAAAGAGACATTCCTGAGAGATCATGG
AACTCAGGCTATGACTGGATCACTGACTTCCCAGGCAAAACAGTTTGGTTTGTTCCAAGCATTAAATCAG
GAAATGATATTGCCAACTGCTTAAGAAAGAATGGAAAACGGGTGATTCAATTGAGCAGGAAAACCTTTGA
CACAGAGTACCAAAAAACAAAAAATAACGACTGGGACTACGTCGTCACAACAGACATCTCCGAAATGGGA
GCAAATTTCCGGGCCGACAGGGTGATAGACCCAAGACGGTGTCTGAAACCGGTAATACTAAAAGATGGTC
CAGAGCGTGTCGTTTTAGCAGGACCGATGCCAGTGACTGTGGCCAGTGCCGCCCAGAGGAGAGGAAGAAT
TGGAAGGAACCACAATAAGGAAGGTGATCAGTACATCTACATGGGACAGCCTTTAAACAACGATGAAGAT
CACGCTCACTGGACGGAAGCAAAAATGCTCCTTGATAATATAAACACACCAGAAGGGATTATCCCAGCCC
TCTTCGAGCCGGAGAGAGAAAAGAGTGCAGCAATAGACGGGGAATACAGACTGCGGGGTGAAGCAAGGAA
AACGTTTGTGGAGCTCATGAGAAGAGGAGATCTACCTGTCTGGCTATCCTACAAAGTTGCCTCAGAAGGC
TTCCAGTACTCTGATAGAAGATGGTGCTTTGACGGGGAAAGGAACAACCAGGTGTTGGAGGAGAACATGG
ACGTGGAGATCTGGACAAAAGAAGGAGAAAGAAAGAAACTACGACCCCGCTGGCTGGATGCCAGAACATA
CTCAGACCCACTGGCCCTGCGCGAGTTTAAAGAGTTTGCAGCAGGAAGAAGAAGCGTCTCAGGTGATCTA
ATATTAGAAATAGGGAAACTTCCACAACACTTGACGCAAAGGGCCCAGAATGCCTTGGACAACCTGGTTA
TGTTGCACAACTCCGAACAAGGAGGAAGAGCCTATAGACATGCAATGGAAGAACTGCCAGACACCATAGA
AACGTTGATGCTCCTAGCTTTGATAGCTGTGTTGACTGGTGGAGTGACGCTGTTCTTCCTATCAGGAAGG
GGCCTAGGGAAAACATCTATCGGCCTACTYTGCGTGATGGCTTCAAGCGTACTGCTATGGATAGCCAGTG
TAGAGCCCCATTGGATAGCGGCCTCCATCATACTGGAGTTCTTTCTGATGGTGCTGCTTATTCCAGAGCC
AGACAGACAACGCACTCCGCAGGACAACCAGTTGGCATATGTGGTGATAGGTTTGTTATTCATGATACTG
ACAGTAGCAGCCAATGAGATGGGACTGCTGGAAACCACAAAGAAAGACTTAGGGATTGGCCATGTGGCTG
TTGAAAATCACCACCATGCCGCAATGCTGGACGTAGACTTACATCCAGCTTCAGCCTGGACCCTCTATGC
AGTGGCCACAACAATTATCACTCCCATGATGAGGCACACAATCGAAAACACAACGGCAAACATTTCCCTG
ACAGCCATTGCAAACCAGGCAGCGATATTGATGGGACTTGACAAAGGATGGCCAATATCAAAGATGGACA
TAGGAGTTCCACTTCTCGCCTTGGGGTGCTATTCCCAGGTAAATCCACTGACGCTGACAGCGGCGGTATT
GATGCTAGTGGCTCATTACGCTATAATTGGACCTGGACTGCAAGCAAAAGCTACTAGAGAAGCTCAAAAA
AGGACAGCGGCCGGAATAATGAAAAATCCAACCGTTGATGGAATCGTTGCAATAGATTTGGACCCTGTGG
TTTATGATGCGAAATTTGAGAAACAACTAGGCCAAATAATGTTGTTGATACTATGCACATCACAGATCCT
CTTGATGCGGACTACATGGGCCTTGTGCGAATCCATCACACTGGCCACTGGACCTCTGACCACGCTCTGG
GAGGGATCTCCAGGAAAATTTTGGAACACCACGATAGCAGTTTCCATGGCAAACATTTTCAGGGGAAGTT
ATCTAGCAGGAGCAGGTCTGGCCTTCTCATTAATGAAATCTCTAGGAGGAGGTAGGAGAGGCACGGGAGC
CCAAGGGGAAACACTGGGAGAGAAATGGAAAAGACAGCTGAACCAACTGAGCAAGTCAGAATTCAACACC
TATAAAAGGAGTGGGATTATGGAAGTGGACAGATCCGAAGCCAAAGAAGGACTGAAAAGGGGAGAAACAA
CCAAACATGCAGTGTCGAGAGGAACCGCTAAATTGAGGTGGTTTGTGGAGAGGAACCTTGTGAAACCAGA
AGGGAAAGTCATAGACCTCGGTTGTGGAAGAGGTGGCTGGTCATACTATTGCGCTGGGCTGAAGAAAGTC
ACAGAAGTGAAGGGATATACAAAAGGAGGACCTGGACATGAAGAACCAATCCCAATGGCGACCTATGGAT
GGAACCTAGTAAAGCTGCACTCCGGGAAAGACGTATTCTTTATACCACCTGAGAAATGTGACACCCTTTT
GTGTGATATTGGTGAGTCCTCTCCAAACCCAACTATAGAGGAAGGAAGAACGCTACGCGTCCTAAAGATG
GTGGAACCATGGCTCAGAGGAAACCAATTTTGCATAAAAATTCTGAATCCCTACATGCCAAGTGTGGTGG
AAACTCTGGAGCAAATGCAAAGAAAACATGGAGGAATGCTGGTGCGAAATCCACTTTCAAGAAATTCTAC
TCATGAAATGTATTGGGTTTCATGTGGAACAGGAAACATTGTGTCAGCAGTAAACATGACATCCAGAATG
TTGCTAAATCGATTCACAATGGCTCACAGGAAACCAACATATGAAAGAGACGTGGACCTAGGCGCCGGAA
CAAGACATGTGGCAGTGGAACCAGAGGTAGCCAACCTAGATATCATTGGCCAGAGGATAGAGAACATAAA
ACATGAACACAAGTCATCATGGCATTATGATGAGGACAATCCATATAAAACATGGGCCTATCATGGATCT
TATGAGGTCAAGCCATCAGGATCAGCCTCATCCATGGTCAATGGCGTGGTGAAACTGCTCACCAAACCAT
GGGATGTCATCCCCATGGTCACACAAATAGCCATGACTGACACTACACCCTTTGGACAACAGAGGGTGTT
TAAAGAGAAAGTTGACACACGCACACCAAAAGCAAAACGAGGCACAGCACAAATCATGGAGGTGACAGCC
AGGTGGTTATGGGGTTTTCTTTCTAGAAACAAGAAGCCAAGAATTTGTACAAGAGAGGAGTTCACAAGAA
AAGTTAGGTCAAACGCAGCCATCGGAGCAGTGTTCGTTGACGAAAATCAATGGAACTCAGCAAAAGAAGC
AGTGGAAGATGAGCGGTTCTGGGACCTTGTGCATAGAGAGAGGGAGCTTCACAAACAGGGAAAATGTGCC
ACGTGTGTTTACAATATGATGGGGAAGAGAGAGAAAAAGCTAGGAGAGTTTGGAAAGGCAAAAGGAAGTC
GTGCAATATGGTACATGTGGTTGGGAGCACGCTTTCTAGAGTTCGAAGCTCTTGGTTTCATGAACGAAGA
CCACTGGTTCAGCAGAGAGAATTCACTCAGCGGAGTGGAAGGAGAAGGACTCCACAAACTTGGATATATA
CTCAGAGACATATCAAAGATTCCAGGGGGAAACATGTATGCAGATGACACAGCCGGATGGGATACAAGGA
TAACAGAGGATGATCTTCAGAATGAGGCCAAAATTACTGACATCATGGAACCCGAACATGCCCTACTGGC
TAAGGCAATCTTCAAGCTAACCTACCAAAATAAAGTGGTAAGGGTACAGAGACCAGCAAAAAATGGAACC
GTGATGGATGTCATATCCAGACGTGACCAGAGAGGAAGTGGCCAGGTCGGAACTTATGGCTTAAACACTT
TCACCAACATGGAAGCCCAGCTGATAAGACAAATGGAGTCTGAGGGAATCTTTTCACCCAGTGAATTAGA
GACCCCAAATTTAGCCGAGAGAGTTCTCGACTGGCTGGAAAAATATGGCGTCGAAAGGCTAAAAAGAATG
GCAATCAGTGGAGATGACTGCGTAGTGAAACCAATTGATGATAGGTTTGCAACAGCCTTAACAGCTCTGA
ATGATATGGGAAAAGTAAGAAAAGATATACCACAATGGGAACCCTCAAAAGGATGGAATGATTGGCAACA
AGTGCCTTTTTGTTCACACCACTTCCACCAGCTGATTATGAAGGATGGGAGGGAAATAGTGGTGCCATGC
CGCAACCAAGATGAACTTGTGGGTAGGGCTAGAGTATCACAAGGTGCTGGATGGAGCCTGAGAGAAACCG
CATGCCTAGGCAAATCATATGCACAAATGTGGCAGCTGATGTACTTCCACAGGAGAGACCTGAGACTGGC
CGCTAATGCTATCTGTTCAGCCGTTCCAGTTGATTGGGTCCCAACCAGCCGCACCACCTGGTCGATCCAT
GCCCATCACCAATGGATGACAACAGAAGACATGCTGTCAGTGTGGAACAGAGTTTGGATAGAGGAAAACC
CATGGATGGAGGACAAAACCCATATATCCAGTTGGGAAGATGTTCCATATTTAGGGAAAAGGGAAGATCA
ATGGTGTGGATCCCTGATAGGCTTAACAGCAAGGGCCACCTGGGCCACCAACATACAAGTGGCCATAAAC
CAAGTGAGAAGACTAATTGGGAATGAGAATTATCTAGATTACATGACATCAATGAAGAGATTCAAGAACG
AGAGTGATCCCGAAGGGGCACTCTGGTGA
2015-10-17 14:01:25.340 UTC
reps00
100
2015-10-17 08:51:10.570 UTC
outgrno00
13
2015-10-17 08:51:27.529 UTC
outfile_PARS0outtreefile_PARS0report_cons_PARS0report_PARS0report_bootstrap0outfile_DIST0report_cons_ML0outfile_ML0SimilarityScore0Alignment_Plot_PNG1Show_Align_Multiple0output_ClustalO0outtreefile_DIST0report_cons_DIST0outtreefile_ML0report_ML0GapsTrimmed_MSAResults0BOOTSTRAPPINGreps0direct_data0fullPath_output00report00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDNA_PARSIMONYoutgrno0fseqbootfile0fullPath_treefile00report00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDRAW_CONSENSE_PARSintreefile0outgrno0outfile00outtreefile00report00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDRAW_CONSENSE_DISToutgrno0intreefile0outfile00outtreefile00report00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDNA_MLoutgrno0fseqbootfile0fullPath_treefile00report00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDRAW_CONSENSE_MLoutgrno0intreefile0report00outfile00outtreefile00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeCLUSTALO_PHYLIPsequence0output00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeCLUSTALO_PIM_SIMSCOREsequence0SimilarityScore00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokePRETTYPLOTdirect_data0Pretty_Plot_Align11net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSHOWALIGNdirect_data0outfile00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDNA_DISTANCE_NJfseqbootfile0outgrno0fullPath_treefile00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMSAGAPSTRIMMINGMSA_Results_Phylip0GapsTrimmed_MSAResults00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeBOOTSTRAPPINGrepsBOOTSTRAPPINGdirect_dataDNA_PARSIMONYoutgrnoDNA_PARSIMONYfseqbootfileDRAW_CONSENSE_PARSintreefileDRAW_CONSENSE_PARSoutgrnoDRAW_CONSENSE_DISToutgrnoDRAW_CONSENSE_DISTintreefileDNA_MLoutgrnoDNA_MLfseqbootfileDRAW_CONSENSE_MLoutgrnoDRAW_CONSENSE_MLintreefileCLUSTALO_PHYLIPsequenceCLUSTALO_PIM_SIMSCOREsequencePRETTYPLOTdirect_dataSHOWALIGNdirect_dataDNA_DISTANCE_NJfseqbootfileDNA_DISTANCE_NJoutgrnoMSAGAPSTRIMMINGMSA_Results_Phylipoutfile_PARSouttreefile_PARSreport_cons_PARSreport_PARSreport_bootstrapoutfile_DISTreport_cons_MLoutfile_MLSimilarityScoreAlignment_Plot_PNGShow_Align_Multipleoutput_ClustalOouttreefile_DISTreport_cons_DISTouttreefile_MLreport_MLGapsTrimmed_MSAResults
7c72f326-ac5e-4b43-9b16-9194efe64f8f
2015-10-17 09:14:48.423 UTC
d9bb0708-5958-43bf-b3b1-d021151cd6a2
2015-10-17 13:37:49.662 UTC
517eeab5-6e62-4314-9d39-b2942ea84568
2015-10-17 08:56:02.428 UTC
e8d9725f-b776-4a89-97d4-3ce2114edcd3
2015-11-01 15:35:45.25 UTC
6ccc3c5f-4331-4ad0-88d5-8fa60c43f1db
2015-11-17 07:51:51.52 UTC
734fdf6f-cd4c-40f9-af54-f53c8019a186
2016-03-25 20:38:31.274 UTC
5a0a09b3-5080-4e05-97a2-25e560ee60d0
2015-11-02 13:47:43.219 UTC
267770fc-1cd5-48eb-8bc9-91d619ded214
2016-03-25 20:51:27.987 UTC
1100dfad-1e2c-419a-952c-82db1f5d6d6b
2015-10-17 10:14:49.715 UTC
3fd84f72-6358-4d72-b6a1-8060d64d8065
2016-03-25 20:50:26.852 UTC
0647f32a-51ce-48d6-ab28-d289de36c86c
2015-10-17 10:59:55.703 UTC
85c38af7-b563-46c6-9825-5b5084309862
2015-11-02 10:23:38.859 UTC
5fccb13c-bc9f-4dfa-b890-dff571c34e2b
2016-03-25 20:35:32.948 UTC
2d2a3f94-a909-4cb3-a5aa-bfe17fdaafa3
2015-10-17 08:51:40.12 UTC
5bb55bda-219e-46a5-a713-8c27377e7e37
2015-10-17 09:05:37.931 UTC
277d12ea-a0b1-4fe9-8d62-fdc165ae8a7c
2015-10-17 13:59:47.860 UTC
bffc1cf6-48f8-4891-a6ce-9322ec716b80
2015-11-02 10:21:36.534 UTC
33230ae1-6a74-4f1c-b8b3-22bc2cd08562
2015-10-26 17:42:49.258 UTC
d7a2b6f0-30d3-4208-8381-6672759eb68f
2015-11-02 19:05:57.808 UTC
f8c697b2-4dda-4540-8951-97b641bf6c36
2015-10-17 09:41:43.625 UTC
66a8db41-bc82-4316-be0b-67d5a95013a4
2015-10-17 08:50:28.714 UTC
0aa5d53e-e452-412a-a935-b54de557a1db
2015-11-02 18:45:33.577 UTC
a724df3c-bcde-436e-9158-8e8b7b438316
2015-10-17 14:01:33.474 UTC
13f4d69d-e2fc-428a-bf25-2d63498c71c6
2015-11-03 16:34:58.863 UTC
49a95980-66c6-4e4e-bda1-f730be58e257
2015-11-02 19:09:46.958 UTC
8b1073d7-8aca-4476-8499-d84aa236d242
2015-11-02 10:26:34.745 UTC
0b5d224a-e2ba-4bf0-9da2-90fa6d7eca0e
2015-10-17 09:17:22.516 UTC
207da8a0-c30d-4d6b-a870-a24a5156abaf
2016-03-25 20:33:00.93 UTC
a8ce98e9-9bcf-42b7-8e1f-c19b5fb1a5f9
2015-10-17 13:38:29.279 UTC
10b7eb7f-770e-449a-a676-40b80a39df28
2016-03-25 20:48:15.960 UTC
3aa578aa-fbc8-4184-96a3-10654f41ce1a
2015-10-17 13:50:32.8 UTC
43171bc7-6a22-46fd-83c6-18f94c494dde
2015-11-02 19:12:34.414 UTC
cf0ac58d-8e89-483b-a20f-44ec617a59b9
2015-11-17 07:18:21.855 UTC
nestedjobId00jobStatus0getStatusparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_molecular_sequence.fdnadist?wsdl
getStatus
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatus" name="parameters" qname="{http://soaplab.org/typedws}getStatus"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_outputinput0jobStatus00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
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2015-10-08 19:08:34.944 UTC
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_ebi_clustalO_inputparameters0email0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
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<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="run" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}run"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="email" qname=">run>email"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>User email address</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="title" qname=">run>title"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>A title to identify the analysis job</xsd:documentation></xsd:annotation></s:basetype><s:complextype optional="false" unbounded="false" typename="InputParameters" name="parameters" qname=">run>parameters"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The list of parameters to be used for launching the analysis</xsd:documentation></xsd:annotation><s:elements><s:basetype optional="true" unbounded="false" typename="boolean" name="guidetreeout" qname="InputParameters>guidetreeout"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output guide tree [Output guide tree.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="dismatout" qname="InputParameters>dismatout"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output distance matrix [Output distance matrix. 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There is currently a limit of 2000 sequences and 2MB of data.]</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
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kasikrit@gmail.com
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<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="runResponse" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}runResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname=">runResponse>jobId"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>A unique identifier for the analysis job</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions>
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<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResultResponse" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}getResultResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="base64Binary" name="output" qname=">getResultResponse>output"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Base64 encoded data corresponding to the output of the job formatted by the renderer</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions>
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<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.5</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>status</name>
<depth>0</depth>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + status.matches(".*RUNNING.*");
if ("true".matches(loop)) {
Thread.sleep(2000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketype_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
aln-phylip
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokestype_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
dna
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_ebi_clustalOparametersgetResultparametersrun_ebi_clustalO_inputparametersrun_ebi_clustalO_inputemailclustalO_inputsequenceclustalO_inputoutfmtclustalO_inputstyperun_ebi_clustalO_outputinputgetResult_inputjobIdgetResult_inputtypegetResult_outputinputGETSTATUSjobIdjobIdstatusoutput
0f5be853-39f8-47c2-8895-b6ea48b6adab
2015-10-11 10:46:08.157 UTC
22984cf0-bc7b-4723-b94c-3f0ad74cd6cd
2015-10-11 09:05:29.774 UTC
48b0deef-2961-40cf-bf13-7ad981374709
2015-10-17 13:49:07.513 UTC
85ed5936-381c-4b39-b6a3-8b3ed295d205
2015-10-11 09:08:07.998 UTC
c63c9a44-c024-42c7-b9d5-d30ab7ba973c
2015-10-11 10:46:50.240 UTC
fbc24586-97cf-471a-b011-f164cdbee929
2015-10-11 10:43:04.473 UTC
d16660e9-7b1d-4266-9f59-8a746b674dde
2015-10-11 09:07:13.347 UTC
f8c3ed4c-363f-42d9-9309-2ac5bd1cc2ce
2015-10-11 08:55:31.309 UTC
9451609b-e84b-44e8-a127-4260036f63b9
2015-10-17 13:49:32.658 UTC
7bdfffb0-1012-4059-8e6b-957d2714db9d
2015-10-11 08:58:35.396 UTC
4b6d28ef-2619-45b8-947a-f14ad6c3e710
2015-10-11 08:57:17.246 UTC
Workflow15outgrno00
13
2015-10-13 16:40:37.878 UTC
intreefile00
/home/kasikrit/Taverna/NCBI_Dengue/FileRef/fdnapars-10/outtreefile.text
2015-10-17 09:03:04.518 UTC
jobId0jobStatus0outfile0outtreefile0report0getResultsparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_consensus.fconsense?wsdl
getResults
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclearparameters0net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_consensus.fconsense?wsdl
clear
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_fconsense_local_outputinput0jobId00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
jobId
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="runResponse" name="parameters" qname="{http://soaplab.org/typedws}runResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="runResponse>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeroot_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResults" name="parameters" qname="{http://soaplab.org/typedws}getResults"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_outputinput0outfile00outtreefile00report00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
report
0
'text/plain'
0
detailed_status
0
'text/plain'
0
outfile
0
'text/plain'
0
outfile_url
0
'text/plain'
0
outtreefile
0
'text/plain'
0
outtreefile_url
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResultsResponse" name="parameters" qname="{http://soaplab.org/fconsense}getResultsResponse"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="report" qname="appResults>report" /><s:basetype optional="true" unbounded="false" typename="long" name="detailed_status" qname="appResults>detailed_status" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile" qname="appResults>outfile" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile_url" qname="appResults>outfile_url" /><s:basetype optional="true" unbounded="false" typename="string" name="outtreefile" qname="appResults>outtreefile" /><s:basetype optional="true" unbounded="false" typename="string" name="outtreefile_url" qname="appResults>outtreefile_url" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokenestedjobId0jobStatus00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.5</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>jobStatus</name>
<depth>0</depth>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + jobStatus.equals("RUNNING");
if ("true".matches(loop)) {
Thread.sleep(2000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="clear" name="parameters" qname="{http://soaplab.org/typedws}clear"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerunparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_consensus.fconsense?wsdl
run
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_inputroot0intreefile0outgrno0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
intreefile
0
'text/plain'
false
method
0
'text/plain'
false
mlfrac
0
'text/plain'
false
root
0
'text/plain'
false
outgrno
0
'text/plain'
false
trout
0
'text/plain'
false
progress
0
'text/plain'
false
treeprint
0
'text/plain'
false
prntsets
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="run" name="parameters" qname="{http://soaplab.org/fconsense}run"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="intreefile" qname="appInputs>intreefile" /><s:basetype optional="true" unbounded="false" typename="string" name="method" qname="appInputs>method" /><s:basetype optional="true" unbounded="false" typename="float" name="mlfrac" qname="appInputs>mlfrac" /><s:basetype optional="true" unbounded="false" typename="boolean" name="root" qname="appInputs>root" /><s:basetype optional="true" unbounded="false" typename="long" name="outgrno" qname="appInputs>outgrno" /><s:basetype optional="true" unbounded="false" typename="boolean" name="trout" qname="appInputs>trout" /><s:basetype optional="true" unbounded="false" typename="boolean" name="progress" qname="appInputs>progress" /><s:basetype optional="true" unbounded="false" typename="boolean" name="treeprint" qname="appInputs>treeprint" /><s:basetype optional="true" unbounded="false" typename="boolean" name="prntsets" qname="appInputs>prntsets" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResultsparametersclearparametersrun_fconsense_local_outputinputgetResults_inputjobIdgetResults_jobIdjobIdgetResults_outputinputnestedjobIdclear_inputjobIdclear_jobIdjobIdrunparametersrun_inputrootrun_inputintreefilerun_inputoutgrnojobIdjobStatusoutfileouttreefilereport
f6c52767-49a3-409e-90ab-f96c5ff7f31b
2015-10-13 16:11:35.61 UTC
9ca54719-8360-402d-9ba4-cd83c937026d
2015-10-13 16:40:39.605 UTC
bade0670-136d-4c08-95b2-b23281777128
2015-10-15 18:52:48.37 UTC
a03e0b97-3402-43c6-8aae-42b4f68933e8
2015-10-17 09:03:06.139 UTC
8a4976e2-0ce9-4ba3-92fb-f53cb75f65a4
2015-10-15 16:59:38.956 UTC
afc73992-cb34-4c97-bfeb-af1ac8bb31c0
2015-10-15 16:39:58.78 UTC
b8c8f940-7e0e-4239-94e7-04a929a5154e
2015-10-15 17:25:09.388 UTC
e666ce8b-8df6-487b-8d4d-0f6a425f18aa
2015-10-15 16:28:11.909 UTC
bda6819e-5610-452a-be2f-288737541799
2015-10-15 17:24:00.626 UTC
acf9e94b-359e-48a7-8918-af02132520b6
2015-10-15 16:45:57.109 UTC
ad115fcf-5f88-41d7-b6f2-1bb62e230c55
2015-10-15 17:26:09.21 UTC
a63183cf-6275-4c91-b0a7-6ab64902adc7
2015-10-15 17:07:09.430 UTC
Workflow47outgrno00
13
2015-10-16 16:18:03.559 UTC
fseqbootfile00fullPaht_outfile_DIST0fullPath_outfile_NJ0fullPath_treefile0report_DIST0report_NJ0DISTANCEMATRIXfseqbootfile0fullPath_output00report00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
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5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeNEIGHTBOR_JOININGdatafile_reference0outgrno0fullPath_outfile00fullPath_treefile00report00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDISTANCEMATRIXfseqbootfileNEIGHTBOR_JOININGdatafile_referenceNEIGHTBOR_JOININGoutgrnofullPaht_outfile_DISTfullPath_outfile_NJfullPath_treefilereport_DISTreport_NJ
23328770-8698-4cfd-9f46-efeb96934c14
2015-10-16 16:15:25.373 UTC
eb6a9062-118f-4997-b67c-a07ae9c0997e
2015-10-16 17:10:10.915 UTC
e1093dc2-b696-41a8-bfcf-8cc930584797
2015-10-16 16:32:15.457 UTC
f33dfab1-1008-4076-9313-7d6c67c11496
2015-10-16 17:06:54.369 UTC
52aa6737-f5c4-4581-a9a5-08b9507707ea
2015-10-16 16:10:57.752 UTC
0c6df7fc-9e89-4ca9-9dc0-82af790600f7
2015-10-16 17:01:13.545 UTC
9c883fcd-fe13-49fb-9f47-49c2431fdb1a
2015-11-02 18:26:23.734 UTC
0d88ba2d-2717-4e1e-b3bb-33ef7f666948
2015-10-16 17:28:32.869 UTC
2526d764-2880-41e1-972e-75f1e7486be0
2015-11-02 16:31:58.337 UTC
349d68b7-3206-4220-92fb-f9fee22bb517
2015-10-16 15:28:12.447 UTC
25b0c13c-8e2e-496e-b9fd-061037050570
2015-10-16 15:23:39.309 UTC
82e9fb4c-93e9-496d-97b7-d946544e24ae
2015-10-16 16:00:03.872 UTC
e7bc5add-82d1-49bd-958d-a08dba17634a
2015-10-16 17:32:30.544 UTC
9ab5d7a2-6a6b-4f85-a456-4d102a8ad853
2015-11-02 15:18:36.136 UTC
a846744f-11b1-4474-b7de-89a425eff7fc
2015-11-02 15:03:42.771 UTC
6fed1dda-38f7-43fb-a175-5a2190e4c980
2015-10-16 16:25:21.387 UTC
3f2b9db0-8e03-4c22-bb0d-89361c4a98fb
2015-10-16 17:11:03.69 UTC
2a3a782c-c21f-449f-80e4-955590441a36
2015-10-16 17:04:34.437 UTC
28e4b762-a23b-4378-a755-d492c2dcfb49
2015-10-16 15:42:56.41 UTC
502731d4-1283-4172-afe0-501778704f93
2015-10-16 17:33:35.953 UTC
090179fb-256b-48f3-8343-a116dc5d83df
2015-10-16 16:18:05.653 UTC
097b2130-aa3d-44bd-88f4-67eaa8f18711
2015-10-16 17:14:28.261 UTC
nestedjobId00jobStatus0getStatusparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_molecular_sequence.fdnapars?wsdl
getStatus
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatus" name="parameters" qname="{http://soaplab.org/typedws}getStatus"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_outputinput0jobStatus00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
jobStatus
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatusResponse" name="parameters" qname="{http://soaplab.org/typedws}getStatusResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobStatus" qname="jobStatus>jobStatus" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatusparametersgetStatus_inputjobIdgetStatus_jobIdjobIdgetStatus_outputinputjobStatus
nested
2015-10-10 17:28:16.477 UTC
c57f8963-6da7-4bf7-8f64-49ae74bbbd3b
2015-10-10 17:28:53.466 UTC
Workflow58JobId00fullPath_output0Concatenate_two_stringsstring10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.5net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string1
0
'text/plain'
java.lang.String
true
string2
0
'text/plain'
java.lang.String
true
output
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokebasePathvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
/home/kasikrit/apache-tomcat-8.0.26/webapps/soaplab2/results/
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_two_strings_2string10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.5net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string1
0
'text/plain'
java.lang.String
true
string2
0
'text/plain'
java.lang.String
true
output
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke_outfilevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
_outfile
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_two_stringsstring1Concatenate_two_stringsstring2Concatenate_two_strings_2string1Concatenate_two_strings_2string2fullPath_output
0150a8c6-0e6a-4cc7-948e-3d7716923458
2015-10-15 09:56:32.133 UTC
6db2137f-4385-42b8-bc48-4a3abf597301
2015-10-15 09:54:39.782 UTC
nestedjobId00jobStatus0getStatusparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_molecular_sequence.fdnaml?wsdl
getStatus
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatus" name="parameters" qname="{http://soaplab.org/typedws}getStatus"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_outputinput0jobStatus00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
jobStatus
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatusResponse" name="parameters" qname="{http://soaplab.org/typedws}getStatusResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobStatus" qname="jobStatus>jobStatus" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatusparametersgetStatus_inputjobIdgetStatus_jobIdjobIdgetStatus_outputinputjobStatus
b303b07b-e9a1-4937-a8b7-35d374f70950
2015-10-16 19:37:56.292 UTC
nested
2015-10-16 19:35:09.561 UTC
Draw_a_sequence_aligdirect_data00
15 449
_T.k9_ TAAAAAAAGG CTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCTTAA
_T.k.10_ ---------- --CAAACTGG GATTAGATAC CCCACTATGC CTAGCCTTAA
_T.k1_ ---------- -TCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.k2_ -TAAAAAGGC TTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.k7_ -TAAAAAGGC TTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.k4_ ---------- -TCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.k3_ -TAAAAAGGC TTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.k8_ --TAAAAAGC TTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.m15_ ---AAAAAGC TTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.m16_ --TAAAAAGC TTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.ablolab---------- ---------- ---------- ---------- ----------
_T.a11_ --TAAAAAGC TTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.p13_ ---------C TTCAAACTGG GATTAGATAC CCCACTATGC CTAACTATAA
_T.p14_ ---------- ---------- ---------- ----CTATGC CTAACTATAA
_T.p9_ -TAAAAAAGG CTCAAACTGG GATTAGATAC CCCACTATGC CTAGCTATAA
CACACAATCA AACTACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACTACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
-----GAT-A AACTCCGCAG TTGTGTCGCC AATACAACTA CGAGTAATAC
CACACAATCA AACTACA-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CATACAATCA AACTACA-AA TTGT-TCGCC AA-ACAACTA CGAGAAATAC
CATACAATCA AACTACA-AA TTGT-TCGCC AA-ACAACTA CGAGAAATAC
CACACAATCA AACTACA-AA TTGT-TCGCC AA-ACAACTA CGAGAAATAC
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCA-CCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCA-CCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCGACCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGN CGGTACTTCA CCCCGACCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA TCCCGACCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA TCCCGACCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA TCCCGACCTA GAGGAGCCTG
TCCAATAACC GACAACCCAC GATTAACCCA ACCACTTCTC GCCCAACAGT
TCCAATAACC GACAACCCAC GATTAACCCA ACCACTTCTC GCCCAACAGT
TCCAATAACC GACAATCCAC GATTAACCCA ACCACTTCTC GCCTAACAGT
TCCAATAACC GACAATCCAC GATTAACCCA ACCACTTCTC GCCTAACAGT
TCCAATAACC GACAATCCAC GATTAACCCA ACCACTTCTC GCCTAACAGT
TCCAATAACC GACAATCCAC GATTAACCCA ACCACTTCTC GCCTAACAGT
TCCAATAACC GACAATCCAC GATTAACCCA ACCACTTCTC GCCTAACAGT
TCCAATAACC GACAATCCAC GATTAACCCA ACCACTTCTC GCCTAACAGT
TCCAATAACC GATAACCCAC GATTAACCCA ACCACTTCTC GCCCAACAGT
TCCAATAACC GATAACCCAC GATTAACCCA ACCACTTCTC GCCCAACAGT
TCTAATAACC GATAACCCAC GATTAACCCA ACCACTTCTT GCCCCACAGT
TCTAATAACC GATAACCCAC GATTAACCCA ACCACTTCTT GCCCCACAGT
TCTAATAACC GATAACCCAC GATTAACCCA ACCACTTCTT GCCCTACAGT
TCTAATAACC GATAACCCAC GATTAACCCA ACCACTTCTT GCCCTACAGT
TCTAATAACC GATAACCCAC GATTAACCCA ACCACTTCTT GCCCTACAGT
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGTCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGTCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCCA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCCA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCCA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCCA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCCA
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AATAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACCTA TGAAGAGG-C
AATAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACCTA TGAAGAGG-C
AATAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACCTA TGAAGAGG-T
AATAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACCTA TGAAGAGG-T
AATAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACCTA TGAAGAGG-T
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTCTGATATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTCTGATATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTATGAAATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTATGAAATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTATGAAATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTATGAAATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTATGAAATT
CAAGATGGGC TACATTCTCC AATAGAGCAC ACGAACAACA CTATGAAATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTATGAAATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTATGAAATT
TAAGATGGGC TACATTCTCT AACAGAGA-T ACGAACAACA CTATGAAATT
TAAGATGGGC TACATTCTCT AACAGAGA-T ACGAACAACA CTATGAAATT
TAAGATGGGC TACATTCTCC AACAGAGAAC ACGAACAACA CTATGAAATT
TAAGATGGGC TACATTCTCC AACAGAGAAC ACGAACAACA CTATGAAATT
TAAGATGGGC TACATTCTTT AACAGAGAAT ACGAACAACA CTATGAAATT
AGCGTTTGAA GGCGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGCGTTTGAA GGCGGATTTA GCAGTAAGAT AAGAATGAAT AAAATACTTA
AGTGTTCGAA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGTGTTCGAA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGTGTTCGAA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGTGTTCGAA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGTGTTCGAA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGTGTTCGAA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGTGTTCGAA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGT-----AA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGTGTTCGAA GGCGGATTTA GCAGTAAGAT AAGAAT---- AGAACACCTA
AGTGTTCGAA GGCGGATTTA GCAGTAAGAT AAGAAT---- AGAACACCTA
AGTGTTCAAA GGCGGATTTA GCAGTAAGAT AAGAAT---- AGAACACCTA
AGTGTTCAAA GGCGGATTTA GCAGTAAGAT AAGAAT---- AGAACACCTA
AATGTTCAAA GGCGGATTTA GCAGTAAGAT AAGAAT---- AGAACACCTA
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTTG--
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTT---
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTTG--
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTTG--
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTTG--
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGT- AC-------
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCC-----
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTCTGG
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTCTG-
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCT----
ACTGAAAATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTTGG-
ACTGAAAATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTTG--
ACTGAAAATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTCTGG
ACTGAAAATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTCTG-
ACTGAAAATA ACGCAATGAA G--------- ---------- ---------
2015-09-25 10:22:52.900 UTC
output from alignment
2015-09-25 10:21:57.544 UTC
Pretty_Plot_Align1report0jobStatus0run_prettyPlotparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://wsembnet.vital-it.ch/soaplab2/typed/services/alignment_multiple.prettyplot?wsdl
run
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclearparameters0net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://wsembnet.vital-it.ch/soaplab2/typed/services/alignment_multiple.prettyplot?wsdl
clear
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResultsparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://wsembnet.vital-it.ch/soaplab2/typed/services/alignment_multiple.prettyplot?wsdl
getResults
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_prettyPlot_inputsequences0graph_format0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
sequences
0
'text/xml'
false
blocksperline
0
'text/plain'
false
graph_format
0
'text/plain'
false
matrixfile_direct_data
0
'text/plain'
false
matrixfile_url
0
'text/plain'
false
residuesperline
0
'text/plain'
false
ccolours
0
'text/plain'
false
cidentity
0
'text/plain'
false
csimilarity
0
'text/plain'
false
cother
0
'text/plain'
false
docolour
0
'text/plain'
false
shade
0
'text/plain'
false
pair
0
'text/plain'
false
identity
0
'text/plain'
false
doboxes
0
'text/plain'
false
boxcol
0
'text/plain'
false
boxuse
0
'text/plain'
false
name
0
'text/plain'
false
maxnamelen
0
'text/plain'
false
number
0
'text/plain'
false
listoptions
0
'text/plain'
false
ratio
0
'text/plain'
false
consensus
0
'text/plain'
false
collision
0
'text/plain'
false
alternative
0
'text/plain'
false
showscore
0
'text/plain'
false
portrait
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="run" name="parameters" qname="{http://soaplab.org/prettyplot}run"><s:elements><s:complextype optional="false" unbounded="false" typename="sequenceInput" name="sequences" qname="appInputs>sequences"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="direct_data" qname="sequenceInput>direct_data" /><s:basetype optional="true" unbounded="false" typename="string" name="usa" qname="sequenceInput>usa" /><s:basetype optional="true" unbounded="false" typename="string" name="sformat" qname="sequenceInput>sformat" /><s:basetype optional="true" unbounded="false" typename="int" name="sbegin" qname="sequenceInput>sbegin"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Start of sequence(s) to be used
</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="send" qname="sequenceInput>send"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>End of sequence(s) to be used
</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="sprotein" qname="sequenceInput>sprotein"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence is protein</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="snucleotide" qname="sequenceInput>snucleotide"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence is nucleotide</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="sreverse" qname="sequenceInput>sreverse"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Reverse (if DNA)</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="slower" qname="sequenceInput>slower"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Make lower case</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="supper" qname="sequenceInput>supper"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Make upper case</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype><s:basetype optional="true" unbounded="false" typename="long" name="blocksperline" qname="appInputs>blocksperline" /><s:basetype optional="true" unbounded="false" typename="string" name="graph_format" qname="appInputs>graph_format" /><s:basetype optional="true" unbounded="false" typename="string" name="matrixfile_direct_data" qname="appInputs>matrixfile_direct_data" /><s:basetype optional="true" unbounded="false" typename="string" name="matrixfile_url" qname="appInputs>matrixfile_url" /><s:basetype optional="true" unbounded="false" typename="long" name="residuesperline" qname="appInputs>residuesperline"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The number of residues to be displayed on each line</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="ccolours" qname="appInputs>ccolours" /><s:basetype optional="true" unbounded="false" typename="string" name="cidentity" qname="appInputs>cidentity" /><s:basetype optional="true" unbounded="false" typename="string" name="csimilarity" qname="appInputs>csimilarity" /><s:basetype optional="true" unbounded="false" typename="string" name="cother" qname="appInputs>cother" /><s:basetype optional="true" unbounded="false" typename="boolean" name="docolour" qname="appInputs>docolour" /><s:basetype optional="true" unbounded="false" typename="string" name="shade" qname="appInputs>shade"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Set to BPLW for normal shading
(black, pale, light, white)
so for pair = 1.5,1.0,0.5 and shade = BPLW
Residues score Colour
1.5 or over... BLACK (B)
1.0 to 1.5 ... BROWN (P)
0.5 to 1.0 ... WHEAT (L)
under 0.5 .... WHITE (W)
The only four letters allowed are BPLW, in any order.</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="pair" qname="appInputs>pair" /><s:basetype optional="true" unbounded="false" typename="long" name="identity" qname="appInputs>identity" /><s:basetype optional="true" unbounded="false" typename="boolean" name="doboxes" qname="appInputs>doboxes" /><s:basetype optional="true" unbounded="false" typename="boolean" name="boxcol" qname="appInputs>boxcol" /><s:basetype optional="true" unbounded="false" typename="string" name="boxuse" qname="appInputs>boxuse" /><s:basetype optional="true" unbounded="false" typename="boolean" name="name" qname="appInputs>name" /><s:basetype optional="true" unbounded="false" typename="long" name="maxnamelen" qname="appInputs>maxnamelen" /><s:basetype optional="true" unbounded="false" typename="boolean" name="number" qname="appInputs>number" /><s:basetype optional="true" unbounded="false" typename="boolean" name="listoptions" qname="appInputs>listoptions" /><s:basetype optional="true" unbounded="false" typename="float" name="ratio" qname="appInputs>ratio" /><s:basetype optional="true" unbounded="false" typename="boolean" name="consensus" qname="appInputs>consensus" /><s:basetype optional="true" unbounded="false" typename="boolean" name="collision" qname="appInputs>collision" /><s:basetype optional="true" unbounded="false" typename="string" name="alternative" qname="appInputs>alternative" /><s:basetype optional="true" unbounded="false" typename="long" name="showscore" qname="appInputs>showscore" /><s:basetype optional="true" unbounded="false" typename="boolean" name="portrait" qname="appInputs>portrait" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeprettyPlot_sequencesdirect_data0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
direct_data
0
'text/plain'
false
usa
0
'text/plain'
false
sformat
0
'text/plain'
false
sbegin
0
'text/plain'
false
send
0
'text/plain'
false
sprotein
0
'text/plain'
false
snucleotide
0
'text/plain'
false
sreverse
0
'text/plain'
false
slower
0
'text/plain'
false
supper
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="sequenceInput" name="sequences" qname="appInputs>sequences"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="direct_data" qname="sequenceInput>direct_data" /><s:basetype optional="true" unbounded="false" typename="string" name="usa" qname="sequenceInput>usa" /><s:basetype optional="true" unbounded="false" typename="string" name="sformat" qname="sequenceInput>sformat" /><s:basetype optional="true" unbounded="false" typename="int" name="sbegin" qname="sequenceInput>sbegin"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Start of sequence(s) to be used
</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="send" qname="sequenceInput>send"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>End of sequence(s) to be used
</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="sprotein" qname="sequenceInput>sprotein"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence is protein</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="snucleotide" qname="sequenceInput>snucleotide"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence is nucleotide</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="sreverse" qname="sequenceInput>sreverse"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Reverse (if DNA)</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="slower" qname="sequenceInput>slower"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Make lower case</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="supper" qname="sequenceInput>supper"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Make upper case</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_prettyPlot_outputinput0jobId00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
jobId
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="runResponse" name="parameters" qname="{http://soaplab.org/typedws}runResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="runResponse>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResults" name="parameters" qname="{http://soaplab.org/typedws}getResults"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="clear" name="parameters" qname="{http://soaplab.org/typedws}clear"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokenestedjobId0jobStatus00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.5</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>jobStatus</name>
<depth>0</depth>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + jobStatus.matches(".*RUNNING.*");
if ("true".matches(loop)) {
Thread.sleep(1000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Servicexml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.5net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<ns3:getResultsResponse xmlns:ns3="http://soaplab.org/prettyplot" xmlns:ns2="http://soaplab.org/typedws"><report>Summary:
Completed: Successfully
Termination status: 0
Started: 2015-Sep-25 12:28:55 (CEST)
Ended: 2015-Sep-25 12:28:59 (CEST)
Duration: 0:00:04.728
Report:
Name: alignment_multiple.prettyplot
Job ID: [alignment_multiple.prettyplot]_62088d16.14fda3eb41c._7e32
Program and parameters:
prettyplot
-sequences
i_sequences
-goutfile=o_Graphics_in_PNGpng
-auto
-graph=png
--- end of parameters
Exit code: 0
</report><detailed_status>0</detailed_status><Graphics_in_PNG>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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokegraph_format_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
png
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
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5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_outputinput0report00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
report
0
'text/plain'
0
detailed_status
0
'text/plain'
0
Graphics_in_Postscript
0
'text/plain'
0
Graphics_in_Postscript_url
0
'text/plain'
0
Graphics_in_PNG
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l('text/plain')
1
Graphics_in_PNG_url
1
l('text/plain')
1
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResultsResponse" name="parameters" qname="{http://soaplab.org/prettyplot}getResultsResponse"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="report" qname="appResults>report" /><s:basetype optional="true" unbounded="false" typename="long" name="detailed_status" qname="appResults>detailed_status" /><s:basetype optional="true" unbounded="false" typename="string" name="Graphics_in_Postscript" qname="appResults>Graphics_in_Postscript" /><s:basetype optional="true" unbounded="false" typename="string" name="Graphics_in_Postscript_url" qname="appResults>Graphics_in_Postscript_url" /><s:arraytype optional="true" unbounded="true" wrapped="false" typename="base64Binary" name="Graphics_in_PNG" qname="appResults>Graphics_in_PNG"><s:elementtype><s:basetype optional="false" unbounded="false" typename="base64Binary" name="" qname="{http://www.w3.org/2001/XMLSchema}base64Binary" /></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="string" name="Graphics_in_PNG_url" qname="appResults>Graphics_in_PNG_url"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_prettyPlotparametersclearparametersgetResultsparametersrun_prettyPlot_inputsequencesrun_prettyPlot_inputgraph_formatprettyPlot_sequencesdirect_datarun_prettyPlot_outputinputgetResults_inputjobIdgetResults_jobIdjobIdclear_inputjobIdclear_jobIdjobIdnestedjobIdXPath_Servicexml_textDecode_Base_64_to_byte_Arraybase64getResults_outputinputPretty_Plot_AlignreportjobStatus
212ad5f2-0adb-48a5-8f4f-bbb43dc4aa05
2015-09-25 10:29:47.673 UTC
adca102b-72fb-47b4-85dd-f2e0c6ba1822
2015-09-25 10:28:41.934 UTC
9ccf1305-c0fd-492c-a83e-7fd49e39c7fa
2015-09-25 10:25:08.871 UTC
70a0616c-bad4-4d6c-8429-20c87ea6871b
2015-11-02 10:26:10.767 UTC
d575c080-7ab4-423f-9580-b5c7e6633cf1
2015-09-25 15:11:31.924 UTC
Draw a sequence alignment with pretty formatting
2015-09-25 15:11:29.982 UTC
e2eadddf-f362-4247-9dd6-f7db75771088
2015-09-25 15:38:27.116 UTC
6bfaead4-3caa-4ef8-bc8d-92fbe9140567
2015-09-25 10:26:48.351 UTC
a377ac06-d15e-4c44-a73a-c6bc7a5e7b50
2015-09-25 15:36:24.274 UTC
471420e0-82dd-41ae-b02c-2c9eba9e70f6
2015-09-25 15:42:07.951 UTC
78599094-4051-4671-bc07-8d687bff6a64
2015-09-25 10:25:18.238 UTC
816474fd-fb6b-4f7e-aafd-4e7c6c44d741
2015-09-25 15:39:54.911 UTC
bb1ae8a3-d200-4375-adc0-e7447e28f3cb
2015-09-25 10:23:20.294 UTC
nestedjobId00status0getStatusparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://www.ebi.ac.uk/Tools/services/soap/clustalo?wsdl
getStatus
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatus" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}getStatus"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname=">getStatus>jobId"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>An identifier for the job to check</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_outputinput0status00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
status
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatusResponse" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}getStatusResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="status" qname=">getStatusResponse>status"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The status of the job (FINISHED, ERROR, RUNNING, NOT_FOUND or FAILURE)</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatusparametersgetStatus_inputjobIdgetStatus_outputinputstatus
nested
2015-10-11 08:52:41.282 UTC
97aef5cb-8c53-45bd-97b4-a3cbfb5d09fb
2015-10-11 08:55:31.536 UTC
Workflow58JobId00fullPath_outfile0fullPath_treefile0Concatenate_two_stringsstring10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.5net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string1
0
'text/plain'
java.lang.String
true
string2
0
'text/plain'
java.lang.String
true
output
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokebasePathvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
/home/kasikrit/apache-tomcat-8.0.26/webapps/soaplab2/results/
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegenOutfileNamestring10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.5net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string1
0
'text/plain'
java.lang.String
true
string2
0
'text/plain'
java.lang.String
true
output
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke_outfilevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
_outfile
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegenTreefileNamestring10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.5net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string1
0
'text/plain'
java.lang.String
true
string2
0
'text/plain'
java.lang.String
true
output
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke_outtreefile_treefilevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
_outtreefile.treefile
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_two_stringsstring1Concatenate_two_stringsstring2genOutfileNamestring1genOutfileNamestring2genTreefileNamestring1genTreefileNamestring2fullPath_outfilefullPath_treefile
c1751925-c2c7-4550-b9a6-9fb18bcee541
2015-10-15 10:28:54.268 UTC
6db2137f-4385-42b8-bc48-4a3abf597301
2015-10-15 09:54:39.782 UTC
0150a8c6-0e6a-4cc7-948e-3d7716923458
2015-10-15 09:56:32.133 UTC
nestedjobId00jobStatus0getStatusparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_consensus.fconsense?wsdl
getStatus
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatus" name="parameters" qname="{http://soaplab.org/typedws}getStatus"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_outputinput0jobStatus00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
jobStatus
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatusResponse" name="parameters" qname="{http://soaplab.org/typedws}getStatusResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobStatus" qname="jobStatus>jobStatus" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatusparametersgetStatus_inputjobIdgetStatus_jobIdjobIdgetStatus_outputinputjobStatus
64e04113-6df2-4b9f-8774-dbf278817e32
2015-10-13 16:11:35.272 UTC
nested
2015-10-13 16:10:10.124 UTC
nestedjobId00jobStatus0getStatusparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://wsembnet.vital-it.ch/soaplab2/typed/services/alignment_multiple.prettyplot?wsdl
getStatus
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatus" name="parameters" qname="{http://soaplab.org/typedws}getStatus"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_outputinput0jobStatus00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
jobStatus
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatusResponse" name="parameters" qname="{http://soaplab.org/typedws}getStatusResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobStatus" qname="jobStatus>jobStatus" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatusparametersgetStatus_inputjobIdgetStatus_jobIdjobIdgetStatus_outputinputjobStatus
6ece647b-2f7a-4388-9ebc-0feda0c686d1
2015-09-25 10:23:20.543 UTC
nested
2015-09-25 10:21:04.153 UTC
Workflow1direct_data00
2 10177
KF744397 ATGAATAACC AACGAAAAAA GGCGAGAAAA ACGCCTTTCA ATATGCTGAA
gb|EU17985 ATGAATAACC AACGGAAAAA GGCGAGAAAT ACGCCTTTCA ATATGCTGAA
ACGCGAGAGA AACCGCGTGT CAACTGTGCA GCAGCTGACA AAGAGATTCT CACTTGGAAT
ACGCGAGAGA AACCGCGTGT CAACTGTGCA GCAGCTGACA AAGAGATTCT CACTTGGAAT
GCTGCAGGGA CGAGGACCAT TGAAACTGTT CATGGCCCTG GTGGCATTCC TTCGTTTCCT
GCTACAGGGA CGAGGACCAT TGAAACTGTT CATGGCCCTG GTGGCATTCC TTCGTTTCCT
AACAATCCCG CCAACAGCAG GGATATTAAA AAGATGGGGA ACAATCAAAA AATCAAAGGC
AACAATCCCG CCAACAGCAG GGATATTAAA AAGATGGGGA ACAATCAAAA AATCAAAGGC
TATCAATGTC TTGAGAGGGT TCAGGAAAGA GATTGGAAGG ATGCTGAACA TCTTGAACAG
TATCAATGTC TTGAGAGGGT TCAGGAAAGA GATCGGAAGG ATGCTGAACA TCTTGAACAG
GAGACGCAGA ACTGCAGGTG TGATCATCAT GATGATTCCA ACAGTGGTGG CGTTCCATTT
GAGACGCAGA ACTGCAGGTA TAATTATTAT GGTGATTCCA ACAGTGATGG CGTTCCATTT
AACCACACGC AACGGAGAAC CACACATGAT CGTCAGTAGA CAAGAGAAAG GGAAAAGTCT
AACCACACGC AACGGAGAAC CACACATGAT CGTCAGTAGA CAAGAGAAAG GGAAAAGTCT
TCTGTTTAAA ACAGAGAACG GTGTGAACAT GTGTACCCTC ATGGCCTTGG ACCTTGGTGA
TCTGTTTAAA ACAGAGAACG GTGTGAACAT GTGTACCCTT ATGGCCATGG ACCTTGGTGA
ATTGTGTGAA GACACAATCA CTTATAATTG TCCTCTTCTC AGGCAGAATG AACCAGAAGA
ACTGTGTGAA GACACAATCA CTTACAATTG TCCTCTTCTC AGGCAGAATG AACCAGAAGA
CATAGACTGT TGGTGCAACT CTACGTCTAC ATGGGTAACT TATGGGACAT GCACCGCCAC
CATAGACTGT TGGTGCAACT CTACGTCTAC ATGGGTAACT TATGGGACAT GCACCGCTAC
AGGAGAACAC AGAAGGGAAA AAAGATCAGT GGCACTCGTT CCACATGTGG GAATGGGACT
AGGAGAACAC AGAAGGGAAA AAAGATCAGT GGCACTCGTT CCACATGTGG GAATGGGACT
GGAGACACGA ACTGAAACAT GGATGTCATC AGAAGGGGCC TGGAAACATG CTCAGAGAAT
GGAGACACGA ACTGAAACAT GGATGTCATC AGAAGGGGCC TGGAAACATG CACAGAGAAT
CGAAACTTGG GTCTTGAGAC ATCCAGGCTT TACCATAATG GCAGCAATCC TGGCATACAC
TGAAACTTGG GTCTTGAGAC ATCCAGGCTT CACCATAATG GCAGCAATCC TGGCATACAC
CATAGGAACG ACATATTTCC AAAGAGTCCT GATTTTCATC TTACTGACAG CTGTCGCTCC
CATAGGAACG ACATATTTCC AAAGAGTCCT GATTTTCATC TTACTGACAG CTGTCGCTCC
TTCAATGACA ATGCGTTGTA TAGGAATATC AAATAGAGAC TTTGTGGAAG GGGTTTCAGG
TTCAATGACA ATGCGTTGTA TAGGAATATC AAATAGAGAC TTTGTGGAAG GGGTTTCAGG
AGGAAGCTGG GTTGACATAG TCTTAGAACA TGGAAGCTGT GTGACGACGA TGGCGAAAAA
AGGAAGCTGG GTTGACATAG TCTTGGAACA TGGAAGCTGT GTGACGACGA TGGCGAAAAA
TAAACCAACA TTGGATTTTG AACTGACAAA AACGGAAGCC AAACATCCCG CCACTTTAAG
CAAACCAACA TTGGATTTTG AACTGATAAA GACAGAAGCC AAACATCCCG CCACTCTAAG
GAAGTATTGT ATAGAGGCAA AGCTGACCAA CACAACAACA GCATCTCGCT GCCCAACACA
GAAGTATTGT ATAGAGGCAA AGCTGACCAA CACAACAACA GCATCTCGCT GCCCAACACA
AGGAGAACCC AGCCTAAATG AAGAACAGGA CAAAAGGTTT GTCTGCAAAC ACTCCATGGT
AGGAGAACCT AGCCTAAATG AAGAACAGGA CAAAAGATTT GTCTGCAAAC ACTCCATGGT
AGACAGAGGA TGGGGAAATG GATGCGGATT ATTTGGAAAG GGAGGCATCG TGACCTGTGC
AGACAGAGGA TGGGGAAATG GATGCGGATT ATTTGGAAAG GGAGGTATCG TGACCTGTGC
AATGTTCACA TGCAAAAAGA ACATGGAAGG AAAAATCGTG CAACCAGAAA ACTTGGAGTA
AATGTTCACA TGCAAAAAGA ACATGGAGGG AAAAATCGTG CAACCAGAAA ACTTGGAGTA
CACCATTGTG ATAACACCTC ACTCAGGGGA AGAGAATGCA GTCGGAAATG ACACAGGAAA
CACCATTGTG ATAACACCTC ACTCAGGGGA AGAGAATGCA GTCGGAAATG ACACAGGAAA
ACACGGCAAG GAAATTAAAG TAACACCACA GAGTTCCATT ACAGAAGCAG AACTGACAGG
ACACGGCAAG GAAATTAAAG TAACACCACA GAGTTCCATC ACAGATGCAG AACTAACAGG
CTATGGCACT GTCACGATGG AATGCTCTCC GAGAACGGGC CTCGACTTTA ATGAGATGGT
CTATGGCACT GTCACGATGG AATGCTCTCC GAGAACGGGA CTCGACTTCA ATGAGATGGT
GTTGCTGCAA ATGGAAGACA AGGCTTGGCT GGTGCACAGG CAGTGGTTCT TAGACCTTCC
GTTGCTGCAA ATGGAAAACA AGGCTTGGCT GGTGCACAGG CAATGGTTCT TAGACCTGCC
GTTACCATGG CTGCCCGGAG CAGACACACA AGGATCAAAT TGGATACAGA AGGAGACATT
ATTACCATGG CTGCCCGGAG CAGACACACA AGGATCAAAT TGGATACAGA AGGAGACATT
GGTCACTTTC AAAMATCCCC ATGCGAAGAA ACAGGATGTT GTCGTTTTAG GATCCCAAGA
GGTCACTTTC AAAAATCCCC ATGCAAAGAA ACAGGATGTT GTTGTTTTAG GATCCCAAGA
AGGGGCTATG CATACAGCAC TCACAGGGGC CACGGAAATC CAGATGTCAT CAGGAAACTT
AGGGGCTATG CACACAGCAC TCACAGGGGC CACGGAAATC CAGATGTCAT CAGGAAACTT
ACTGTTCACA GGACATCTTA AGTGCAGGCT GAGAATGGAC AAACTACAGC TCAAAGGAAT
ACTGTTCACA GGACATCTTA AATGTAGGCT GAGAATGGAC AAACTACAGC TCAAAGGAAT
GTCATATTCT ATGTGTACAG GAAAGTTTAA AGTTGTGAAG GAAATAGCAG AAACACAACA
GTCATATTCC ATGTGTACAG GAAAGTTCAA AGTTGTGAAG GAAATAGCAG AAACACAACA
TGGAACAATA GTTATCAGAG TACAATATGA AGGGGACGGT TCTCCGTGCA AGATCCCTTT
TGGAACAATA GTTATCAGAG TACAATATGA AGGGGACGGT TCTCCGTGCA AGATCCCTTT
TGAAATAATG GATTTGGAAA AAAGACATGT CTTAGGTCGC TTGATCACAG TCAACCCAAT
TGAAATAATG GATTTGGAAA AAAGACATGT CTTAGGTCGC TTGATTACAG TCAACCCAAT
TGTTGCAGAA AAAGACAGCC CAGTCAACAT AGAAGCAGAA CCTCCATTCG GAGACAGTTA
TGTCACAGAA AAAGACAGCC CAGTCAACAT AGAAGCAGAA CCCCCATTCG GAGACAGCTA
CATCATTATA GGAGTAGAAC CGGGACAACT GAAGCTCAGC TGGTTTAAGA AAGGAAGTTC
CATCATTATA GGAGTAGAAC CGGGACAACT GAAGCTCAGC TGGTTTAAGA AAGGAAGTTC
TATTGGCCAA ATGTTTGAGA CAACAATGAG AGGAGCGAAG AGAATGGCCA TCTTAGGTGA
TATTGGCCAA ATGTTTGAGA CAACAATGAG AGGAGCGAAG AGAATGGCCA TTTTAGGTGA
CACAGCTTGG GATTTTGGAT CCCTGGGAGG AGTGTTCACA TCTATAGGAA AGGCCCTCCA
CACAGCTTGG GATTTTGGAT CCCTGGGAGG AGTGTTCACA TCTATAGGAA AGGCCCTCCA
CCAAGTCTTT GGAGCAATCT ATGGGGCTGC CTTTAGCGGG GTTTCATGGA CTATGAAAAT
CCAAGTCTTT GGAGCAATCT ATGGGGCTGC CTTCAGTGGG GTTTCATGGA CTATGAAAAT
CCTCATAGGA GTCGTCATCA CATGGATAGG AATGAATTCA CGCAGCACCT CACTGTCTGT
CCTCATAGGA GTCGTCATCA CATGGATAGG AATGAATTCA CGCAGCACCT CACTGTCTGT
GTCACTAGTA TTAGTGGGGG TCGTGACATT GTATTTGGGA GTCATGGTGC AGGCCGATAG
GTCACTAGTA TTAGTGGGAG TCGTGACATT GTATTTGGGA GTTATGGTGC AGGCCGATAG
TGGTTGCGTT GTGAGTTGGA GAAACAAAGA ACTGAAATGT GGTAGTGGGA TTTTTATCAC
TGGTTGCGTT GTGAGCTGGA AAAACAAAGA ACTGAAATGT GGCAGTGGGA TTTTTATCAC
AGACAACGTG CACACATGGA CAGAACAATA CAAATTCCAA CCAGAATCCC CTTCAAAGCT
AGACAACGTG CACACATGGA CAGAACAATA CAAATTCCAA CCAGAATCCC CTTCAAAGCT
GGCTTCAGCT ATCCAGAAGG CTCATGAAGA GGGCATTTGT GGAATCCGCT CAGTAACAAG
GGCTTCAGCT ATCCAGAAGG CTCATGAAGA AGGCATTTGT GGAATCCGCT CAGTAACAAG
ATTGGAGAAT CTGATGTGGA AACAAATAAC ACCAGAACTG AATCACATTC TATCAGAAAA
ACTGGAGAAT CTGATGTGGA AACAAATAAC ACCAGAACTG AATCACATTC TATCAGAAAA
TGAGGTAAAA TTGACTATCA TGACAGGAGA CATTAAAGGA ATCATGCAGG CAGGAAAACG
TGAGGTGAAG TTGACTATCA TGACAGGAGA TATTAAAGGA ATCATGCAGG CAGGAAAACG
ATCCCTGCGG CCCCAACCCA CTGAGCTGAA GTACTCTTGG AAAGCATGGG GCAAAGCGAA
ATCCCTGCGG CCTCAACCCA CTGAGCTGAA GTACTCTTGG AAAGCATGGG GCAAAGCGAA
AATGCTCTCC ACAGAGCTTC ATAACCACAC CTTTCTCATT GATGGCCCCG AAACAGCAGA
AATGCTCTCC ACAGAGCTTC ATAACCACAC CTTTCTCATT GATGGCCCCG AAACAGCAGA
ATGTCCCAAC ACAAACAGAG CTTGGAACTC ACTAGAAGTT GAAGACTATG GCTTTGGAGT
ATGTCCCAAC ACAAACAGAG CTTGGAACTC ACTAGAGGTT GAAGACTATG GCTTTGGAGT
ATTCACCACC AACATATGGC TGAAACTGAA AGAAAGGCAG GATGTATTTT GTGACTCAAA
ATTCACCACC AACATATGGC TGAAATTGAA AGAAAGGCAG GATGTATTTT GTGACTCAAA
ACTCATGTCA GCAGCCATAA GAGACAACAG GGCCGTCCAC GCCGATATGG GTTATTGGAT
ACTCATGTCA GCAGCCATAA AAGACAACAG AGCCGTCCAC GCCGACATGG GTTATTGGAT
AGAAAGCGCA CTTAATGACA CATGGAAGAT TGAGAAAGCC TCTTTTATTG AAGTTAAAAG
AGAAAGCGCA CTCAATGACA CATGGAAGAT TGAGAAAGCC TCTTTTATTG AAGTTAAAAG
CTGCCACTGG CCAAAGTCAC ACACTCTCTG GAGTAATGGA GTGCTAGAAA GTGAGATGAT
CTGCCACTGG CCAAAGTCAC ACACTCTCTG GAGTAATGGA GTGCTAGAAA GTGAGATGAT
AATTCCAAAG AATTTTGCAG GACCAGTGTC ACAGCACAAC TACAGACCAG GCTATCATAC
AATTCCAAAG AATTTTGCAG GACCAGTGTC ACAACACAAT TACAGACCAG GCTATCATAC
ACAAACGGCA GGACCCTGGC ATCTAGGTAA GCTTGAGATG GACTTTGATT TCTGCGAAGG
ACAAACGGCA GGACCCTGGC ATCTAGGCAG GCTTGAGATG GACTTTGATT TCTGCGAAGG
AACCACAGTG GTAGTGACTG AGGACTGTGG AAATAGAGGA CCCTCTTTAA GAACAACTAC
AACCACAGTG GTGGTGACTG AGGACTGTGG AAATAGAGGA CCCTCTTTAA GAACAACTAC
TGCTTCTGGA AAACTCATAA CAGAATGGTG CTGCCGATCT TGCACATTAC CACCGCTAAG
TGCTTCTGGA AAACTCATAA CAGAATGGTG CTGCCGATCT TGCACATTAC CACCGCTAAG
GTACAGAGGT GAGGATGGAT GCTGGTATGG AATGGAAATC AGGCCATTGA AAGAGAAAGA
GTACAGAGGT GAGGATGGAT GCTGGTATGG AATGGAAATC AGACCATTGA AGGAGAAAGA
AGAGAACTTG GTCAACTCTT TGGTCACAGC CGGACTTGGA CAGATTGACA ACTTCTCACT
AGAGAACTTG GTCAACTCTT TGGTCACAGC CGGACATGGA CAGATTGACA ACTTCTCACT
AGGAGTCTTG GGAATGGCA- TTGTTCCTGG AAGAAATGCT CAGGACCCGC GTAGGAACGA
AGGAGTCTTG GG-ATGGCAT TTGTTCCTGG AAGAGATGCT CAGAACCCGA GTAGGAACGA
AACATGCAAT ATTGCTAGTT GCAGTTTCTT TCGTGACATT GATCACAGGG AACATGTCTT
AACATGCAAT ATTACTAGTT GCAGTCTCTT TCGTGACATT GATCACAGGG AACATGTCCT
TTCGAGATTT GGGGAGAGTG ATGGTTATGG TGGGCGCTAC TATGACGGAT GACATAGGCA
TTCGAGATTT GGGGAGAGTG ATGGTCATGG TGGGCGCTAC TATGACGGAT GACATAGGCA
TGGGCGTGAC TTATCTTGCC CTATTAGCAG CCTTCAAAGT CAGACCAACT TTTGCAGCTG
TGGGTGTGAC TTATCTTGCC CTATTAGCAG CCTTCAAGGT TAGACCAACT TTTGCAGCTG
GACTACTCTT GAGAAAGCTG ACCTCCAAGG AATTAATGAT GACCACCATA GGAATCGTAC
GACTACTCTT AAGAAAGCTG ACCTCCAAGG AATTGATGAT GACCACCATA GGAATCGTAC
TCCTCTCTCA GAGCACCATA CCAGAGACTA TACTTGAACT GACTGACGCG CTGGCTTTGG
TCCTCTCTCA GAGCACCATA CCAGAGACTA TACTTGAACT GACTGACGCA TTGGCTTTGG
GGATGATGGT TCTCAAAATA GTGAGAAACA TGGAAAAGTA TCAACTAGCA GTGACTATCA
GGATGATGGT TCTCAAAATA GTAAGAAACA TGGAAAAGTA TCAACTAGCA GTGACTATCA
TGGCCATCTT GTGCGTCCCA AATGCAGTGA TATTACAAAA CGCATGGAAA GTGAGCTGCA
TGGCTATCTT GTGCGTCCCA AATGCAGTGA TATTACAAAA CGCATGGAAA GTGAGCTGCA
CAACACTGGC AGTGGTGTCC GTTTCCCCAC TGCTTTTAAC ATCCTCACAG CAGAAAGCAG
CAACACTGGC AGTGGTGTCC GTTTCCCCAC TGCTTTTAAC ATCCTCACAG CAGAAAGCGG
ATTGGATACC ACTGGCGTTG ACGATCAAAG GCCTCAATCC AACAGCCATT TTCTTAACAA
ATTGGATACC ACTGGCGCTG ACGATCAAAG GCCTCAATCC AACAGCCATT TTCTTAACAA
CCCTCTCAAG AACTAGCAAG AAAAGGAGCT GGCCACTAAA TGAGGCTATT ATGGCAGTCG
CCCTCTCAAG AACTAGCAAG AAAAGGAGCT GGCCACTAAA TGAGGCTATT ATGGCAGTCG
GGATGGTGAG CATTTTAGCC AGTTCTCTCT TAAAGAATGA TATTCCCATG ACAGGACCAT
GGATGGTGAG CATTTTAGCC AGTTCTCTCT TAAAGAATGA TATTCCCATG ACAGGACCAT
TAGTAGCTGG AGGGCTTCTC ACTGTGTGTT ACGTGCTCAC TGGAAGATCG GCTGATTTGG
TGGTGGCTGG AGGGCTTCTC ACTGTGTGTT ACGTGCTCAC TGGAAGATCG GCTGATTTGG
AACTGGAGAG AGCTGCTGAC GTAAGATGGG AAGAACAGGC AGAGATATCA GGAAGTAGTC
AACTGGAGAG AGCTGCTGAC GTAAGATGGG AAGAACAGGC AGAGATATCA GGAAGCAGTC
CAATTCTGTC AATAACAATA TCGGAAGATG GTAGCATGTC GATAAAAAAT GAAGAAGAAG
CATTTCTGTC GATAACAATA TCGGAAGATG GTAGCATGTC GATAAAAAAT GAAGAAGAAG
AACAAACACT GACCATACTC ATTAGGACAG GACTGCTGGT GATATCAGGA CTTTTTCCCG
AACAAACACT GACCATACTG ATTAGAACAG GACTGCTGGT GATATCAGGA CTTTTTCCCG
TGTCAATACC AATCACGGCA GCTGCATGGT ACCTGTGGGA AGTGAAAAAA CAACGAGCCG
TGTCAATACC AATCACGGCA GCTGCATGGT ACCTGTGGGA AGTGAAAAAA CAACGAGCCG
GAGTATTGTG GGATGTCCCT TCACCCCCAC CTGTGGGAAA GGCCGAACTG GAAGATGGAG
GAGTATTGTG GGATGTCCCT TCACCTCCAC CTGTGGGAAA GGCCGAACTG GAAGATGGAG
CCTATAGAAT CAAGCAGAAA GGGATTCTAG GATACTCGCA GATCGGGGCT GGAGTTTACA
CCTATAGAAT CAAGCAGAAA GGGATTCTAG GATACTCGCA GATCGGAGCC GGAGTCTACA
AAGAAGGAAC ATTCCACACA ATGTGGCACG TCACACGCGG TGCTGTCCTA ATGCATAAAG
AAGAAGGAAC ATTCCACACA ATGTGGCATG TCACACGTGG TGCTGTTCTA ATGCATAAAG
GGAAGAGAAT TGAACCATCA TGGGCGGACG TCAAGAAAGA CCTAATATCG TATGGAGGAG
GGAAGAGAAT TGAACCATCA TGGGCGGACG TCAAGAAAGA CCTAATATCG TATGGAGGAG
GCTGGAAGCT AGAAGGAGAA TGGAAGGAAG GAGAAGAAGT CCAGGTCCTG GCATTAGAGC
GCTGGAAGCT AGAAGGAGAA TGGAAGGAAG GAGAAGAAGT CCAGGTCCTG GCATTAGAGC
CTGGAAAGAA TCCAAGAGCC GTCCAAACAA AACCCGGTCT CTTCAAAACT AACACTGGAA
CTGGAAAGAA TCCAAGAGCC GTCCAAACAA AACCCGGTCT TTTTAAAACT AACACTGGAA
CCATAGGCGC CGTATCTCTG GACTTTTCTC CTGGAACGTC AGGATCTCCA ATCGTCGACA
TCATAGGCGC CGTATCTCTG GACTTTTCTC CTGGAACGTC AGGATCTCCA ATTGTCGACA
AAAAAGGAAA AGTTGTGGGC CTTTATGGCA ACGGCGTCGT CACAAGGAGT GGAACATATG
AAAAAGGAAA AGTTGTGGGC CTTTATGGCA ACGGTGTCGT CACAAGGAGT GGAACATATG
TGAGTGCCAT AGCCCAGACT GAAAAAAGCA TTGAAGATAA TCCAGAGATT GAAGATGACA
TGAGTGCCAT AGCCCAGACT GAAAAAAGCA TTGAAGACAA CCCAGAGATT GAAGATGACA
TCTTTCGAAA GAAAAGATTG ACCATCATGG ACCTCCACCC AGGGGCGGGA AAAACGAAGA
TCTTTCGAAA GAAAAGATTG ACCATCATGG ACCTCCACCC AGGAGCAGGA AAAACAAAGA
GATACCTTCC AGCAATAGTC AGAGAAGCCA TAAAACGAGG CTTGAGGACA CTAATCCTGG
GATACCTTCC AGCAATAGTC AGAGAAGCCA TAAAACGAGG CTTGAGAACA CTAATCCTGG
CCCCCACTAG AGTTGTGGCG GCTGAAATGG AAGAAGCTCT CAGAGGACTT CCAATAAGAT
CCCCCACTAG AGTTGTGGCG GCTGAAATGG AAGAAGCTCT CAGAGGACTT CCAATAAGAT
ACCAAACCCC CGCCATCAGA GCTGAGCACA CTGGGCGGGA GATTGTGGAT CTAATGTGTC
ACCAAACCCC AGCTATCAGA GCTGAGCACA CTGGGCGGGA GATTGTGGAT CTAATGTGTC
ACGCCACATT TACCATGAGG CTGCTATCCC CAATTAGAGT ACCAAATTAC AACCTGATCA
ACGCCACATT TACCATGAGG CTACTATCAC CAATTAGAGT GCCAAATTAT AACCTGATTA
TCATGGATGA AGCCCATTTC ACAGACCCAG CAAGCATAGC AGCTAGAGGA TACATTTCAA
TCATGGATGA AGCCCATTTC ACAGACCCAG CAAGCATAGC AGCTAGAGGA TACATTTCAA
CTCGAGTTGA GATGGGTGAA GCAGCTGGGA TTTTCATGAC AGCTACTCCT CCTGGAAGCA
CTCGAGTAGA GATGGGTGAA GCAGCTGGGA TTTTCATGAC AGCTACCCCT CCTGGAAGCA
GAGACCCATT TCCTCAGAGC AATGCACCAA TCATGGATGA AGAAAGGGAA ATCCCTGAGC
GAGACCCATT TCCTCAGAGC AATGCACCAA TCATGGATGA AGAAAGGGAA ATCCCTGAGC
GTTCGTGGAA TTCTGGACAT GAATGGGTTA CGGATTTTAA AGGGAAGACT GTTTGGTTTG
GTTCGTGGAA CTCTGGACAT GAGTGGGTTA CGGATTTTAA AGGGAAGACT GTTTGGTTTG
TTCCAAGTAT AAAAGCAGGA AATGATATAG CAGCTTGCCT GAGAAAGAAT GGAAAGAAAG
TTCCAAGTAT AAAAGCAGGA AATGATATAG CAGCTTGCCT GAGAAAGAAT GGAAAGAAAG
TGATACAACT CAGCAGGAAG ACCTTTGATT CTGAATATGT CAAGACTAGG ACCAATGATT
TGATACAACT CAGCAGGAAG ACCTTTGATT CTGAATACAT CAAGACTAGG ACCAATGATT
GGGACTTTGT GGTCACGACA GACATTTCAG AAATGGGCGC TAACTTCAAG GCTGAGAGGG
GGGACTTTGT GGTCACGACA GACATTTCAG AAATGGGTGC TAACTTCAAG GCTGAGAGGG
TTATAGACCC CAGGCGCTGC ATGAAACCAG TCATACTAAC AGACGGTGAA GAGCGGGTGA
TTATAGACCC CAGACGCTGC ATGAAACCAG TCATACTAAC AGACGGTGAA GAGCGGGTGA
TCCTGGCAGG ACCCATGCCA GTGACCCACT CTAGTGCAGC ACAAAGAAGA GGGAGAGTAG
TTCTGGCAGG ACCCATGCCA GTGACCCACT CTAGTGCAGC ACAAAGAAGA GGGAGAATAG
GAAGAAATCC AAAAAATGAA AATGACCAGT ACATATACAT GGGGGAACCT CTGGAAAATG
GAAGAAATCC AAAAAATGAA AATGACCAGT ACATATACAT GGGGGAACCT CTGGAAAATG
ATGAAGACTG TGCACACTGG AAAGAAGCTA AGATGCTTCT AGATAACATC AACACGCCCG
ATGAAGACTG CGCACACTGG AAAGAAGCTA AGATGCTTCT AGATAACATC AACACGCCTG
AAGGAATCAT TCCCAGTATG TTCGAACCAG AGCGTGAAAA GGTGGATGCC ATTGATGGTG
AAGGAATCAT TCCCAGCATG TTCGAACCAG AGCGTGAAAA GGTCGACGCC ATTGATGGTG
AATACCGCTT AAGAGGAGAA GCGAGGAAAA CTTTTGTGGA CCTAATGAGA AGAGGAGACC
AATACCGCTT GAGAGGAGAA GCGAGGAAAA CATTTGTGGA CCTAATGAGA AGAGGAGACC
TACCAGTCTG GCTAGCCTAC AGAGTGGCAG CTGAAGGTAT CAACTACGCA GACAGAAGAT
TACCAGTCTG GCTAGCCTAC AGAGTGGCAG CTGAAGGTAT CAACTACGCA GACAGAAGAT
GGTGCTTTGA TGGAGTCAAG AACAATCAAA TCTTGGAAGA AAATGTGGAA GTGGAAATTT
GGTGCTTTGA TGGAGTCAAG AACAACCAAA TCTTGGAAGA AAATGTGGAA GTGGAAATTT
GGACAAAAGA AGGAGAAAGG AAGAAATTAA AACCCAGATG GTTGGATGCT AGGATCTACT
GGACAAAAGA AGGAGAAAGG AAGAAATTAA AACCCAGATG GTTAGATGCT AGGATCTACT
CTGACCCACT GGCGCTCAAA GAATTCAAGG AATTCGCAGC TGGAAGAAAG TCCCTGACCC
CTGACCCACT GGCGCTCAAA GAATTCAAGG AATTCGCAGC TGGAAGAAAA TCCCTGACCT
TGAATCTAAT CACAGAGATG GGTAGGCTCC CAACCTTCAT GACCCAGAAA GCAAGGAACG
TGAATCTAAT CACCGAGATG GGTAGGCTCC CAACCTTCAT GACCCAGAAA GCAAGGAATG
CACTAGACAA CTTAGCAGTC CTGCATACGG CTGAAGCAGG CGGAAGGGCG TACAATCATG
CATTGGACAA CTTAGCAGTC CTGCATACGG CTGAAGCAGG CGGAAGGGCG TACAACCATG
CTCTTAGTGA ACTGCCGGAG ACCCTGGAGA CATTGCTTTT ACTGACACTC TTGGCCACAG
CTCTTAGTGA ACTGCCGGAG ACTCTGGAGA CATTGCTTTT ACTGACACTT TTGGCCACAG
TCACGGGCGG AATCTTCCTA TTCTTGATGA GCGGAAAAGG CATAGGGAAG ATGACCCTGG
TCACGGGCGG AATCTTCCTG TTCTTGATGA GCGGAAAAGG TATAGGGAAG ATGACTCTGG
GAATGTGCTG CATAATCACG GCCAGTGTTC TCCTATGGTA TGCACAAATA CAGCCACACT
GAATGTGCTG CATAATCACG GCCAGTACTC TCCTATGGTA TGCACAAATA CAGCCACATT
GGATAGCAGC TTCAATAATA CTGGAGTTTT TTCTCATAGT CTTGCTCATT CCAGAACCAG
GGATAGCAGC TTCAATAATA CTGGAGTTTT TTCTCATAGT CTTGCTCATT CCAGAACCAG
AAAAGCAGAG AACACCCCAA GATAACCAAT TAACTTATGT TGTCATAGCC ATCCTTACAG
AAAAGCAGAG AACACCCCAA GACAACCAAT TAACTTATGT TGTCATAGCC ATCCTTACAG
TGGTGGCCGC AACCATGGCA AACGAGATGG GTTTCCTGGA AAAAACAAAG AAAGACTTCG
TGGTGGCCGC AACCATGGCA AACGAGATGG GTTTCCTGGA AAAAACAAAG AAAGATTTCG
GATTGGGAAG CATTGCAACC CAGCAACCTG AGAGCAACAT CCTGGACATA GATCTACGTC
GATTGGGAAG TATTACAACC CAGCAACCTG AGAGCAACAT CCTGGACATA GATCTACGTC
CTGCATCAGC TTGGACTCTA TATGCTGTGG CAACAACTTT CATCACACCA ATGCTGAGAC
CTGCATCAGC TTGGACTCTA TATGCCGTGG CAACAACTTT CATCACACCA ATGTTGAGAC
ACAGCATTGA AAATTCCTCA GTGAATGTGT CTCTAACGGC CATTGCCAAC CAAGCCACAG
ATAGCATTGA AAATTCCTCA GTGAATGTGT CTCTAACAGC CATTGCCAAC CAAGCCACAG
TTTTAATGGG TCTTGGGAAA GGATGGCCAT TGTCAAAAAT GGACATCGGA GTTCCCCTTC
TGTTAATGGG TCTTGGGAAA GGATGGCCAT TGTCGAAAAT GGACATCGGA GTTCCCCTTC
TCGCTATCGG GTGCTATTCA CAAGTTAACC CCATAACTCT CACGGCAGCC CTTCTCTTAT
TCGCTATCGG ATGCTATTCA CAAGTCAACC CCATAACTCT CACAGCAGCC CTTCTCTTAT
TGGTAGCACA TTATGCCATC ATAGGGCCAG GACTCCAAGC GAAAGCAACT AGAGAAGCTC
TGGTAGCACA TTATGCTATC ATAGGGCCAG GACTCCAAGC GAAAGCAACT AGAGAGGCTC
AGAAAAGAGC AGCAGCGGGC ATCATGAAAA ACCCAACTGT GGATGGAATA ACAGTGATTG
AGAAAAGAGC AGCAGCGGGC ATCATGAAAA ACCCAACTGT GGATGGAATA ACAGTGATTG
ACCTAGATTC AATACCCTAT GATCCAAAGT TTGAAAAGCA GTTGGGACAA GTAATGCTCC
ACCTAGATCC AATACCCTAT GATCCAAAGT TTGAAAAGCA GTTGGGACAA GTAATGCTCT
TAGTCCTCTG CGTGACTCAA GTATTGATGA TGAGGACTAC ATGGGCTTTG TGTGAAGCTC
TAGTCCTCTG CGTGACTCAA GTATTGATGA TGAGGACTAC ATGGGCTTTA TGTGAAGCTC
TAACCTTAGC GACTGGGCCC ATCTCCACAC TGTGGGAAGG AAATCCAGGG AGATTTTGGA
TAACCTTAGC GACCGGGCCC ATCTCTACAC TGTGGGAAGG AAATCCAGGG AGATTTTGGA
ATACAACTAT TGCAGTATCA ATGGCTAACA TTTTTAGAGG GAGCTACCTG GCCGGAGCCG
ATACAACTAT TGCAGTGTCA ATGGCTAACA TTTTTAGAGG GAGTTACCTG GCCGGAGCCG
GACTTCTCTT TTCTATCATG AAGAATACGG CCAACACAAG AAGGGGAACT GGCAACACAG
GACTTCTCTT TTCTATCATG AAGAACACGG CCAACACAAG AAGGGGAACT GGCAACACAG
GAGAGACGCT TGGAGAAAAA TGGAAAAACC GATTGAATGC ATTGGGGAAG AGTGAATTTC
GAGAGACGCT TGGAGAGAAA TGGAAAAACC GGTTGAATGC ATTGGGGAAG AGTGAATTCC
AGATCTATAA GAAAAGTGGA ATCCAGGAGG TGGATAGAAC CTTAGCAAAA GAAGGCATCA
AGATCTATAA GAAAAGTGGA ATCCAGGAAG TGGATAGAAC CTTAGCAAAA GAAGGCATCA
AAAGAGGAGA AACGGACCAT CACGCTGTGT CGCGAGGCTC GGCGAAACTG AGATGGTTCG
AGAGAGGAGA AACGGACCAT CACGCTGTGT CGCGAGGCTC AGCGAAACTG AGATGGTTCG
TCGAGAGAAA CCTGGTCACA CCAGAAGGGA AAGTAATGGA CCTCGGTTGC GGCAGGGGGG
TCGAGAGAAA CCTGGTCACA CCAGAAGGGA AAGTAGTGGA CCTTGGCTGC GGCAGGGGGG
GCTGGTCATA CTATTGTGGG GGACTAAAGA ATGTAAAAGA AGTCAAAGGC CTAACAAAAG
GCTGGTCATA CTATTGTGGG GGACTAAAGA ATGTAAAAGA AGTCAAAGGC CTAACAAAAG
GAGGACCAGG ACACGAAGAA CCCATTCCCA TGTCAACATA TGGTTGGAAC CTGGTGCGTC
GAGGACCAGG ACACGAAGAA CCCATTCCCA TGTCAACATA TGGTTGGAAT CTGGTGCGTC
TTCAAAGTGG AGTTGATGTT TTTTTTACTC CGCCAGAAAA GTGTGACACA CTACTGTGTG
TTCAAAGTGG AGTCCATGTC TTTTTTACTC CCCCCGAAAA GTGTGACCCA TTGCTGTGTG
ACATAGGGGA GTCGTCACCA AACCCCACGG TTGAGGCAGG ACGAACACTC AGAGTTCTAA
ACATAGGGGA GTCGTCACCA AACCCCACGG TTGAGGCAGG ACCAACACTC CGAGTTCTAA
ACCTAGTGGA AAATTGGCTG AACAACAACA CCCAATTTTG CATCAAGGTT CTCAACCCAT
ACTTAGTGGA AAACTGGCTG AACAACCACC CCCAATTTTG CATAAAGGTT CTCAACCCAT
ATATGCCCTC AGTTATAGAA AAAATGGAAG CGCTGCAAAG GAAATACGGA GGAGCTTTGG
ATATGCCTTC CGTTATAGAA AAAATGGAAG CGCTACCAAG GAAATATGGA GGAGCTTTGG
TGAGGAATCC ACTCTCACGA AATTCCACAC ACGAGATGTA CTGGGTATCC AATGCTTCCG
TGAGGAATCC ACTCTCACGA AATTCCCCAC ACGAGATGTA CTGGGTATCC AATGCTTCCG
GGAACATAGT GTCATCAGTG AACATGATTT CAAGAATGTT GATTAACAGG TTCACAATGA
GGAACATAGT GTCATCAGTG AACATGATTT CAAGAATGTT GATTAACAGA TTCACAATGA
GACATAAGAA GGCCACATAC GAGCCAGATG TTGACCTCGG AAGCGGAACC CGCAACATCG
GACACAAGAA GGCCACATAC GAGCCAGATG TTGATCTCGG AAGTGGAACC CGCAACATCG
GAATTGAAAG TGAGATACCA AATTTGGACA TAATTGGGAA AAGAATAGAA AAAATAAAAC
GAATTGAAAG TGAGACACCA AATTTAGACA TAATTGGGAA AAGAATAGAA AAAATAAAAC
AAGAGCATGA AACATCATGG CACTATGACC AGGACCACCC ATACAAAACG TGGGCCTACC
AAGAGCATGA AACATCATGG CACTATGACC AAGACCACCC ATACAAAACG TGGGCCTATC
ATGGCAGCTA CGAAACAAAA CAGACTGGAT CGGCATCATC CATGGTGAAC GGAGTGGTTA
ATGGCAGCTA CGAAACAAAA CAGACTGGAT CAGCATCATC CATGGTGAAC GGAGTGGTTA
GGCTGCTAAC AAAACCTTGG GACGTCATCC CTATGGTGAC ACAGATGGCA ATGACAGACA
GGCTGCTAAC AAAACCTTGG GACGTCATCC CTATGGTGAC ACAGATGGCA ATGACAGACA
CGACTCCATT TGGACAACAG CGCGTTTTCA AAGAGAAAGT GGACACGAGA ACCCAAGAAC
CGACTCCATT TGGACAACAG CGCGTTTTCA AAGAGAAAGT GGACACGAGA ACCCAAGAAC
CGAAAGAAGG CACGAAAAAA CTAATGAAAA TCACGGCAGA ATGGCTCTGG AAAGAATTAG
CGAAAGAAGG CACGAAAAAA CTAATGAAAA TCACGGCAGA ATGGCTCTGG AAAGAACTAG
GAAAGAAAAA GACACCTAGG ATGTGCACCA GAGAAGAATT CACAAGAAAG GTGAGAAGCA
GAAAGAAAAA GACACCTAGG ATGTGCACCA GAGAAGAATT CACAAGAAAG GTGAGAAGCA
ATGCAGCCTT AGGCGCCATA TTCACTGATG AGAACAAGTG GAAGTCGGCA CGTGAGGCTG
ATGCAGCCTT AGGTGCCATA TTCACTGATG AGAACAAGTG GAAGTCGGCA CGTGAGGCTG
TTGAAGATAG TGGATTTTGG GAACTGGTTG ACAAGGAAAG GAATCTTCAT CTTGAAGGAA
TTGAAGACAG TGGATTTTGG GAATTGGTTG ACAAGGAAAG GAATCTCCAT CTTGAAGGAA
AGTGTGAGAC ATGTGTGTAT AACATGATGG GAAAGAGAGA GAAGAAGCTA GGGGAGTTCG
AGTGTGAGAC ATGTGTGTAC AACATGATGG GAAAGAGAGA GAAGAAGCTA GGGGAGTTCG
GCAAAGCAAA AGGCAGCAGA GCCATATGGT ACATGTGGCT TGGAGCACGC TTCTTAGAGT
GCAAAGCAAA AGGCAGCAGA GCCATATGGT ACATGTGGCT TGGAGCACGC TTCTTAGAGT
TTGAAGCCCT AGGATTCTTG AATGAAGATC ACTGGTTTTC CAGAGAGAAC TCCCTGAGTG
TTGAAGCCCT AGGATTCTTG AATGAAGATC ACTGGTTTTC CAGAGAGAAC TCCCTGAGTG
GAGTGGAAGG AGAAGGGCTG CACAAACTAG GCTACATTTT AAGAGACGTG AGCAAGAAAG
GAGTGGAAGG AGAAGGGCTG CACAAACTAG GCTACATTTT AAGAGACGTG AGTAAGAAAG
AAGGAGGAGC AATGTACGCC GATGACACMG CAGSATGGGA CACAAGAATC ACACTAGAGG
AAGGAGGAGC AATGTACGCC GATGACACCG CAGGATGGGA CACAAGAATC ACACTAGAGG
ACTTAAAAAA TGAAGAAATG GTGACAAACC ACATGGAAGG AGAACACAAG AAACTTGCTG
ACTTGAAAAA TGAAGAAATG GTGACAAACC ACATGGAAGG AGAACACAAG AAACTTGCCG
AAGCCATTTT CAAATTAACG TACCAAAACA AGGTGGTGCG TGTGCAAAGA CCAACACCAA
AAGCCATTTT CAGATTAACG TACCAAAACA AAGTGGTGCG TGTGCAAAGA CCGACACCAA
GAGGCACAGT AATGGACATT ATATCGAGAA GAGACCAAAG AGGTAGCGGA CAAGTTGTCA
GAGGCACAGT AATGGACATT ATATCGAGAA GAGACCAAAG AGGTAGTGGA CAGGTTGTCA
CCTACGGCCT CAATACTTTC ACCAACATGG AAGCCCAACT GATCAGACAG ATGGAGGGAG
CCTACGGCCT CAATACTTTC ACCAACATGG AAGCCCAACT GATCAGACAG ATGGAGGGAG
AAGGAGTCTT CAAAAGCATC CAGCACCTGA CAGTCACAGA AGAAATTGCA GTGAAAAACT
AAGGAGTCTT CAAGAGCATC CAGCACCTGA CAGTCACAGA AGAAATTGCA GTGAAAAACT
GGTTAGCAAG AGTGGGGCGT GAGAGGTTAT CAAGAATGGC TATCAGTGGA GATGATTGTG
GGTTAGCAAG AGTGGGGCGT GAGAGGTTAT CAAGAATGGC CATCAGTGGA GATGATTGTG
TTGTGAAACC CTTAGATGAT AGGTTTGCAA GCGCTCTAAC AGCTCTAAAT GACATGGGAA
TTGTGAAACC CTTAGATGAC AGGTTTGCAA GCGCTCTAAC AGCTCTAAAT GACATGGGAA
AAGTTAGGAA AGACATACAA CAATGGGAAC CTTCAAGAGG ATGGAACGAT TGGACACAAG
AGGTTAGGAA AGACATACAA CAATGGGAAC CTTCAAGAGG ATGGAACGAT TGGACACAAG
TGCCCTTTTG TTCACACCAT TTCCATGAGW TAATCATGAA GGACGGTCGC GTACTCGTAG
TGCCCTTTTG TTCACACCAT TTCCATGAGT TAATCATGAA GGACGGTCGT GTACTTGTAG
TTCCATGCAG AAACCAAGAT GAACTGATTG GTAGGGCCCG AATTTCCCAG GGAGCCGGGT
TTCCATGTAG AAACCAAGAT GAACTGATTG GTAGGGCCCG AATTTCCCAG GGAGCCGGGT
GGTCTTTGCG GGAAACAGCC TGTTTGGGGA AGTCTTACGC CCAAATGTGG AGCCTGATGT
GGTCCCTGCG GGAAACAGCC TGTTTGGGGA AGTCTTACGC CCAAATGTGG AGCCTGATGT
ACTTCCACAG ACGTGACCTT AGGCTGGCGG CAAATGCCAT TTGCTCGGCA GTCCCATCAC
ACTTCCACAG ACGTGACCTT AGGCTGGCGG CAAATGCCAT TTGCTCGGCA GTCCCATCAC
ATTGGGTTCC AACAAGTCGA ACAACTTGGT CCATACATGC CACACATGAG TGGATGACAA
ATTGGGTTCC AACAAGTCGA ACAACCTGGT CCATACACGC CACACATGAG TGGATGACAA
CAGAAGATAT GCTGACAGTC TGGAACAGGG TGTGGATTCA AGAAAACCCA TGGATGGAAG
CAGAAGACAT GCTGACAGTC TGGAACAGGG TGTGGATTCA AGAAAACCCA TGGATGGAAG
ACAAAACTCC AGTAGAATCA TGGGAGGAAA TCCCATATTT GGGGAAAAGA GAAGACCAAT
ACAAAACTCC AGTAGAATCA TGGGAGGAAA TCCCATATTT GGGGAAAAGA GAAGACCAAT
GGTGCGGCTC ATTGATCGGG CTAACAAGCA GGGCCACTTG GGCAAAGAAC ATCCAAACAG
GGTGCGGCTC ATTGATTGGG CTAACAAGCA GGGCCACCTG GGCAAAGAAC ATCCAAACAG
CAATAAATCA AGTTAGATCC CTAATAGGCA ATGAGGAATA CACGGACTAC ATGCCATCCA
CAATAAATCA AGTTAGATCC CTAATAGGCA ATGAGGAATA CACAGACTAC ATGCCATCCA
TGAAAAGGTT CAGAAGAGAA GAGGAAGAGG CAGGAGTCTT GTGGTAG
TGAAAAGATT CAGAAGAGAA GAGGAAGAGG CAGGAGTCTT GTGGTAG
2015-10-07 07:52:35.921 UTC
reps00
1000
2015-10-07 10:39:11.841 UTC
jobId0jobStatus0fullPath_output0report0outfile0outfile_url0run_fseqboot_localparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_molecular_sequence.fseqboot?wsdl
run
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_fseqboot_local_inputsequence0reps0seqtype0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
sequence
0
'text/xml'
false
categories_direct_data
0
'text/plain'
false
categories_url
0
'text/plain'
false
weights_direct_data
0
'text/plain'
false
weights_url
0
'text/plain'
false
test
0
'text/plain'
false
regular
0
'text/plain'
false
fracsample
0
'text/plain'
false
rewriteformat
0
'text/plain'
false
seqtype
0
'text/plain'
false
blocksize
0
'text/plain'
false
reps
0
'text/plain'
false
justweights
0
'text/plain'
false
seed
0
'text/plain'
false
printdata
0
'text/plain'
false
dotdiff
0
'text/plain'
false
progress
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="run" name="parameters" qname="{http://soaplab.org/fseqboot}run"><s:elements><s:complextype optional="false" unbounded="false" typename="sequenceInput" name="sequence" qname="appInputs>sequence"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="direct_data" qname="sequenceInput>direct_data" /><s:basetype optional="true" unbounded="false" typename="string" name="usa" qname="sequenceInput>usa" /><s:basetype optional="true" unbounded="false" typename="string" name="sformat" qname="sequenceInput>sformat" /><s:basetype optional="true" unbounded="false" typename="int" name="sbegin" qname="sequenceInput>sbegin"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Start of sequence(s) to be used
</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="send" qname="sequenceInput>send"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>End of sequence(s) to be used
</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="sprotein" qname="sequenceInput>sprotein"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence is protein</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="snucleotide" qname="sequenceInput>snucleotide"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence is nucleotide</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="sreverse" qname="sequenceInput>sreverse"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Reverse (if DNA)</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="slower" qname="sequenceInput>slower"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Make lower case</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="supper" qname="sequenceInput>supper"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Make upper case</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype><s:basetype optional="true" unbounded="false" typename="string" name="categories_direct_data" qname="appInputs>categories_direct_data" /><s:basetype optional="true" unbounded="false" typename="string" name="categories_url" qname="appInputs>categories_url" /><s:basetype optional="true" unbounded="false" typename="string" name="weights_direct_data" qname="appInputs>weights_direct_data" /><s:basetype optional="true" unbounded="false" typename="string" name="weights_url" qname="appInputs>weights_url" /><s:basetype optional="true" unbounded="false" typename="string" name="test" qname="appInputs>test" /><s:basetype optional="true" unbounded="false" typename="boolean" name="regular" qname="appInputs>regular" /><s:basetype optional="true" unbounded="false" typename="float" name="fracsample" qname="appInputs>fracsample" /><s:basetype optional="true" unbounded="false" typename="string" name="rewriteformat" qname="appInputs>rewriteformat" /><s:basetype optional="true" unbounded="false" typename="string" name="seqtype" qname="appInputs>seqtype" /><s:basetype optional="true" unbounded="false" typename="long" name="blocksize" qname="appInputs>blocksize" /><s:basetype optional="true" unbounded="false" typename="long" name="reps" qname="appInputs>reps" /><s:basetype optional="true" unbounded="false" typename="string" name="justweights" qname="appInputs>justweights" /><s:basetype optional="true" unbounded="false" typename="long" name="seed" qname="appInputs>seed" /><s:basetype optional="true" unbounded="false" typename="boolean" name="printdata" qname="appInputs>printdata" /><s:basetype optional="true" unbounded="false" typename="boolean" name="dotdiff" qname="appInputs>dotdiff" /><s:basetype optional="true" unbounded="false" typename="boolean" name="progress" qname="appInputs>progress" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokelocal_sequencedirect_data0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
direct_data
0
'text/plain'
false
usa
0
'text/plain'
false
sformat
0
'text/plain'
false
sbegin
0
'text/plain'
false
send
0
'text/plain'
false
sprotein
0
'text/plain'
false
snucleotide
0
'text/plain'
false
sreverse
0
'text/plain'
false
slower
0
'text/plain'
false
supper
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="sequenceInput" name="sequence" qname="appInputs>sequence"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="direct_data" qname="sequenceInput>direct_data" /><s:basetype optional="true" unbounded="false" typename="string" name="usa" qname="sequenceInput>usa" /><s:basetype optional="true" unbounded="false" typename="string" name="sformat" qname="sequenceInput>sformat" /><s:basetype optional="true" unbounded="false" typename="int" name="sbegin" qname="sequenceInput>sbegin"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Start of sequence(s) to be used
</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="send" qname="sequenceInput>send"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>End of sequence(s) to be used
</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="sprotein" qname="sequenceInput>sprotein"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence is protein</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="snucleotide" qname="sequenceInput>snucleotide"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence is nucleotide</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="sreverse" qname="sequenceInput>sreverse"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Reverse (if DNA)</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="slower" qname="sequenceInput>slower"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Make lower case</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="supper" qname="sequenceInput>supper"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Make upper case</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_fseqboot_local_outputinput0jobId00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
jobId
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="runResponse" name="parameters" qname="{http://soaplab.org/typedws}runResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="runResponse>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGETSTATUSjobId0jobStatus00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.5</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>jobStatus</name>
<depth>0</depth>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + jobStatus.equals("RUNNING");
if ("true".matches(loop)) {
Thread.sleep(2000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
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http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_molecular_sequence.fseqboot?wsdl
getResults
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
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input
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report
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outfile
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<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResultsResponse" name="parameters" qname="{http://soaplab.org/fseqboot}getResultsResponse"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="report" qname="appResults>report" /><s:basetype optional="true" unbounded="false" typename="long" name="detailed_status" qname="appResults>detailed_status" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile" qname="appResults>outfile" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile_url" qname="appResults>outfile_url" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_fseqboot_localparametersrun_fseqboot_local_inputsequencerun_fseqboot_local_inputrepsrun_fseqboot_local_inputseqtypelocal_sequencedirect_datarun_fseqboot_local_outputinputGETSTATUSjobIdGETFILEPATHJobIdgetResultsparametersgetResults_inputjobIdgetResults_jobIdjobIdgetResults_outputinputjobIdjobStatusfullPath_outputreportoutfileoutfile_url
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run
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_outputinput0jobId00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeauto_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGETSTATUSjobId0jobStatus00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.5</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>jobStatus</name>
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<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
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<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + jobStatus.equals("RUNNING");
if ("true".matches(loop)) {
Thread.sleep(2000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResultsparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_molecular_sequence.fdnaml?wsdl
getResults
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResults" name="parameters" qname="{http://soaplab.org/typedws}getResults"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_outputinput0outfile00outtreefile00report00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
report
0
'text/plain'
0
detailed_status
0
'text/plain'
0
outfile
0
'text/plain'
0
outfile_url
0
'text/plain'
0
outtreefile
0
'text/plain'
0
outtreefile_url
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResultsResponse" name="parameters" qname="{http://soaplab.org/fdnaml}getResultsResponse"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="report" qname="appResults>report" /><s:basetype optional="true" unbounded="false" typename="long" name="detailed_status" qname="appResults>detailed_status" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile" qname="appResults>outfile" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile_url" qname="appResults>outfile_url" /><s:basetype optional="true" unbounded="false" typename="string" name="outtreefile" qname="appResults>outtreefile" /><s:basetype optional="true" unbounded="false" typename="string" name="outtreefile_url" qname="appResults>outtreefile_url" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclearparameters0net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_molecular_sequence.fdnaml?wsdl
clear
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="clear" name="parameters" qname="{http://soaplab.org/typedws}clear"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGETFILEPATHJobId0fullPath_treefile00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerunparametersrun_inputautorun_inputoutgrnorun_inputfseqbootfilerun_outputinputGETSTATUSjobIdgetResultsparametersgetResults_inputjobIdgetResults_jobIdjobIdgetResults_outputinputclearparametersclear_inputjobIdclear_jobIdjobIdGETFILEPATHJobIdjobIdjobStatusoutfileouttreefilereportfullPath_treefile
4ba194a6-a756-4ad4-8daa-d72ec4835759
2015-10-16 20:10:26.281 UTC
02ea923e-9a55-4bef-a20c-370f0b35edd4
2015-10-16 20:11:30.279 UTC
2ce06426-eda0-445d-8da1-db98a110b99a
2015-10-16 19:51:12.259 UTC
1ec000fd-3aba-427b-9874-598b561dacf1
2015-10-16 19:46:52.141 UTC
ab409809-726a-4fea-95b6-28db05ed6c8a
2015-10-16 20:10:57.778 UTC
fc36cdd7-cd26-43f2-bf4b-32cf2fc7d5e6
2015-10-16 19:43:50.719 UTC
dfe095fa-7d88-4f1f-a03c-4cb34eb9da3a
2015-10-16 19:37:56.164 UTC
Workflow5fseqbootfile00
/home/kasikrit/Dropbox/PhD/Taverna/output-nogap.fseqboot
2016-03-25 20:48:09.387 UTC
outgrno00
13
2015-10-15 11:08:20.316 UTC
jobId0jobStatus0fullPath_outfile0fullPath_treefile0outfile0outtreefile0report0run_outputinput0jobId00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
jobId
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="runResponse" name="parameters" qname="{http://soaplab.org/typedws}runResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="runResponse>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatusjobId0jobStatus00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.5</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>jobStatus</name>
<depth>0</depth>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + jobStatus.equals("RUNNING");
if ("true".matches(loop)) {
Thread.sleep(2000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeauto_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerunparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_molecular_sequence.fdnapars?wsdl
run
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_inputauto0outgrno0fseqbootfile0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
fseqbootfile
0
'text/plain'
false
intreefile_direct_data
0
'text/plain'
false
intreefile_url
0
'text/plain'
false
outgrno
0
'text/plain'
false
weights_direct_data
0
'text/plain'
false
weights_url
0
'text/plain'
false
maxtrees
0
'text/plain'
false
thorough
0
'text/plain'
false
rearrange
0
'text/plain'
false
transversion
0
'text/plain'
false
auto
0
'text/plain'
false
njumble
0
'text/plain'
false
seed
0
'text/plain'
false
thresh
0
'text/plain'
false
threshold
0
'text/plain'
false
trout
0
'text/plain'
false
printdata
0
'text/plain'
false
progress
0
'text/plain'
false
stepbox
0
'text/plain'
false
ancseq
0
'text/plain'
false
treeprint
0
'text/plain'
false
dotdiff
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="run" name="parameters" qname="{http://soaplab.org/fdnapars}run"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="fseqbootfile" qname="appInputs>fseqbootfile"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>File containing one or more sequence alignments</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="intreefile_direct_data" qname="appInputs>intreefile_direct_data" /><s:basetype optional="true" unbounded="false" typename="string" name="intreefile_url" qname="appInputs>intreefile_url" /><s:basetype optional="true" unbounded="false" typename="long" name="outgrno" qname="appInputs>outgrno" /><s:basetype optional="true" unbounded="false" typename="string" name="weights_direct_data" qname="appInputs>weights_direct_data" /><s:basetype optional="true" unbounded="false" typename="string" name="weights_url" qname="appInputs>weights_url" /><s:basetype optional="true" unbounded="false" typename="long" name="maxtrees" qname="appInputs>maxtrees" /><s:basetype optional="true" unbounded="false" typename="boolean" name="thorough" qname="appInputs>thorough" /><s:basetype optional="true" unbounded="false" typename="boolean" name="rearrange" qname="appInputs>rearrange" /><s:basetype optional="true" unbounded="false" typename="boolean" name="transversion" qname="appInputs>transversion" /><s:basetype optional="true" unbounded="false" typename="boolean" name="auto" qname="appInputs>auto" /><s:basetype optional="true" unbounded="false" typename="long" name="njumble" qname="appInputs>njumble" /><s:basetype optional="true" unbounded="false" typename="long" name="seed" qname="appInputs>seed" /><s:basetype optional="true" unbounded="false" typename="boolean" name="thresh" qname="appInputs>thresh" /><s:basetype optional="true" unbounded="false" typename="float" name="threshold" qname="appInputs>threshold" /><s:basetype optional="true" unbounded="false" typename="boolean" name="trout" qname="appInputs>trout" /><s:basetype optional="true" unbounded="false" typename="boolean" name="printdata" qname="appInputs>printdata" /><s:basetype optional="true" unbounded="false" typename="boolean" name="progress" qname="appInputs>progress" /><s:basetype optional="true" unbounded="false" typename="boolean" name="stepbox" qname="appInputs>stepbox" /><s:basetype optional="true" unbounded="false" typename="boolean" name="ancseq" qname="appInputs>ancseq" /><s:basetype optional="true" unbounded="false" typename="boolean" name="treeprint" qname="appInputs>treeprint" /><s:basetype optional="true" unbounded="false" typename="boolean" name="dotdiff" qname="appInputs>dotdiff" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGETFILEPATHJobId0fullPath_outfile00fullPath_treefile00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResultsparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_molecular_sequence.fdnapars?wsdl
getResults
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclearparameters0net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_molecular_sequence.fdnapars?wsdl
clear
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResults" name="parameters" qname="{http://soaplab.org/typedws}getResults"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_outputinput0outfile00outtreefile00report00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
report
0
'text/plain'
0
detailed_status
0
'text/plain'
0
outfile
0
'text/plain'
0
outfile_url
0
'text/plain'
0
outtreefile
0
'text/plain'
0
outtreefile_url
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResultsResponse" name="parameters" qname="{http://soaplab.org/fdnapars}getResultsResponse"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="report" qname="appResults>report" /><s:basetype optional="true" unbounded="false" typename="long" name="detailed_status" qname="appResults>detailed_status" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile" qname="appResults>outfile" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile_url" qname="appResults>outfile_url" /><s:basetype optional="true" unbounded="false" typename="string" name="outtreefile" qname="appResults>outtreefile" /><s:basetype optional="true" unbounded="false" typename="string" name="outtreefile_url" qname="appResults>outtreefile_url" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="clear" name="parameters" qname="{http://soaplab.org/typedws}clear"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_outputinputgetStatusjobIdrunparametersrun_inputautorun_inputoutgrnorun_inputfseqbootfileGETFILEPATHJobIdgetResultsparametersclearparametersgetResults_inputjobIdgetResults_jobIdjobIdgetResults_outputinputclear_inputjobIdclear_jobIdjobIdjobIdjobStatusfullPath_outfilefullPath_treefileoutfileouttreefilereport
7e806ebe-8d57-4c88-8a7b-85760fa681a1
2015-10-16 10:34:59.10 UTC
49eb2a75-8e71-4986-85fb-6174aaffef5a
2015-10-15 05:01:36.135 UTC
d033c17b-ccd0-4835-af4e-1be654b73f74
2015-10-15 10:42:36.792 UTC
c9cf7e12-3b4e-4e79-bf23-0c7322a4bec6
2015-10-16 14:42:47.840 UTC
41ea1c26-5877-4a44-aaab-2df3c6347569
2015-10-15 06:10:42.74 UTC
1469e557-bb97-4065-9f09-a9887c0b78a6
2015-10-15 05:07:08.833 UTC
52c71726-5d5a-4e75-9f69-eed3044646a8
2015-10-17 05:53:38.183 UTC
5c0d86aa-b912-4fb2-a79c-1a5082199361
2015-10-10 18:09:04.783 UTC
ec883c40-86bf-40ce-837e-aa06781eb69e
2015-10-15 10:47:22.273 UTC
9a68951c-d6bb-43cf-80e1-92c21c22cb71
2015-10-16 14:41:40.874 UTC
f511fb99-8ed8-4e09-b4d4-4f8085519c53
2015-10-17 05:59:48.638 UTC
33f4fd3e-968e-4a45-922a-3179058170ee
2015-10-16 14:59:06.695 UTC
f138b2c9-5cf2-48aa-82b0-3cab3b9ae33e
2015-10-16 15:06:24.572 UTC
b07cb4bd-03d4-4189-b15f-514cb992ffbe
2015-10-15 05:02:51.639 UTC
67270ad9-3414-48a0-b36f-a23bf7e656fb
2015-10-15 11:09:52.90 UTC
a3b09e81-29f6-499c-9a98-c1a92f1b9770
2015-10-10 17:28:53.284 UTC
5ea29f43-c5ed-4b50-9d05-ad16e6585fad
2015-10-15 07:35:32.612 UTC
b2439367-b24e-42e7-8151-a7272af59738
2015-10-16 10:12:54.147 UTC
63d84430-cfce-428c-a41a-c0c800caee16
2016-03-25 20:48:11.596 UTC
31faacd1-5fea-4c63-9336-d2bc6c00c610
2015-10-15 07:32:56.569 UTC
d3add69b-44e0-47b7-ae66-c2ee96b8095d
2015-10-16 15:05:10.454 UTC
59df0ad4-5a52-47ca-8a5e-9b55b52f629b
2015-10-17 06:02:49.682 UTC
0f422a53-5c53-4d3b-827b-48957f71fbaf
2015-10-15 05:11:38.743 UTC
9aed2983-0d5d-4800-a468-0fbbaaba61c2
2015-10-10 18:20:49.714 UTC
Workflow13MSA_Results_Phylip00
13 10221
KF744397 1tgaataaccaacgaaaaaaggcgagaaaaacgcctttcaatatgctgaa
KF744398 atgaataaccaacgaaaaaaggcgagaaaaacgcctttcaatatgctgaa
KF744399 atgaataaccaacgaaaaaaggcgagaaaaacgcctttcaatatgctgaa
KF744400 atgaataaccaacgaaaaaaggcgagaaaaacgcctttcaatatgctgaa
KF744401 ATGAATAACCAACGGAAAAAGGCGAGAAATACGCCTTTCAATATGCTGAA
KF744402 atgaataaccaacgaaaaaaggcgagaaaaacgcctttcaatatgctgaa
KF744403 atgaataaccaacgaaaaaaggcgagaaaaacgcctttcaatatgctgaa
KF744404 atgaataaccaacgaaaaaaggcgagaaaaacgcctttcaatatgctgaa
KF744405 atgaataaccaacgaaaaaaggcgagaaaaacgcctttcaatatgctgaa
KF744406 atgaataaccaacgaaaaaaggcgagaaaaacgcctttcaatatgctgaa
KF744407 atgaataaccaacgaaaaaaggcgagaaaaacgcctttcaatatgctgaa
KF744408 atgaataaccaacgaaaaaaggcgagaaaaacgcctttcaatatgctgaa
JN697058 ATGAACAACCAACGAAAAAAGACGGCTCGACCGTCTTTCAATATGCTGA1
2cgcgagagaaaccgcgtgtcaactgtgcagcagctgacaaagagattct
acgcgagagaaaccgcgtgtcaactgtgcagcagctgacaaagagattct
acgcgagagaaaccgcgtgtcaactgtgcagcagctgacaaagagattct
acgcgagagaaaccgcgtgtcaactgtgcagcagctgacaaagagattct
ACGCGAGAGAAACCGCGTGTCAACTGTACAACAGCTGACAAAGAGATTCT
acgcgagagaaaccgcgtgtcaactgtgcagcagctgacaaagagattct
acgcgagagaaaccgcgtgtcaactgtgcagcagctgacaaagagattct
acgcgagagaaaccgcgtgtcaactgtgcagcagctgacaaagagattct
acgcgagagaaaccgcgtgtcaactgtgcagcagctgacaaagagattct
acgcgagagaaaccgcgtgtcaactgtgcagcagctgacaaagagattct
acgcgagagaaaccgcgtgtcaactgtgcagcagctgacaaagagattct
acgcgagagaaaccgcgtgtcaactgtgcagcagctgacaaagagattct
ACGCGCGAGAAACCGCGTGTCAACTGTTTCACAGTTGGCGAAGAGATTC2
3acttggaatgctgcagggacgaggaccattgaaactgttcatggccctg
cacttggaatgctgcagggacgaggaccattgaaactgttcatggccctg
cacttggaatgctgcagggacgaggaccattgaaactgttcatggccctg
cacttggaatgctgcagggacgaggaccatt-------------------
CACTTGGAATGCTGCAGGGACGAGGACCATTAAAACTATTCATGGCCCTG
cacttggaatgctgcagggacgaggaccattgaaactgttcatggccctg
cacttggaatgctgcagggacgaggaccattgaaactgttcatggccctg
cacttggaatgctgcagggacgaggaccattgaaactgttcatggccctg
cacttggaatgctgcagggacgaggaccattgaaactgttcatggccctg
cacttggaatgctgcagggacgaggaccattgaaactgttcatggccctg
cacttggaatgctgcagggacgaggaccattgaaactgttcatggccctg
cacttggaatgctgcagggacgaggaccattgaaactgttcatggccctg
CAAAAGGATTGCTCTCAGGCCAAGGACCCATGAAACTGGTGATGGCTTT3
4agaagaggaagaggcaggagtcttgtggtag-----------------4
--------------------------------------------------
gagaagaggaagaggcaggagtcttgtggtagttcagaagagaagaggaa
gagaagaggaagaggcaggagtcttgtggtag------------------
GAGAAGAGGAAGAGGCAGGAGTCCTGTGGTAG------------------
gagaagaggaagaggcaggagtcttgtggtag------------------
gagaagaggaagaggcaggagtcttgtggtag------------------
gagaagaggaagaggcaggagtcttgtggtag------------------
gagaagaggaagaggcaggagtcttgtggtag------------------
gagaagaggaagaggcaggagtcttgtggtag------------------
gagaagaggaagaggcaggagtcttgtggtag------------------
gagaagaggaagaggcaggagtcttgtggtag------------------
ACGAGAGTGATCCCGAAGGGGCACTCTGGTGA-----------------4
5--------------------
---------------------
gaggcaggagtcttgtggtag
---------------------
---------------------
---------------------
---------------------
---------------------
---------------------
---------------------
---------------------
---------------------
--------------------5
2015-11-16 19:41:20.158 UTC
GapsTrimmed_MSAResults0gapsTrimmingparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/axis2/services/MSAGapsTrimming?wsdl
gapsTrimming
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegapsTrimming_inputargs00output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
args0
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="gapsTrimming" name="parameters" qname="{http://msa}gapsTrimming"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="args0" qname="{http://msa}>gapsTrimming>args0" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegapsTrimming_outputinput0return00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
return
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="gapsTrimmingResponse" name="parameters" qname="{http://msa}gapsTrimmingResponse"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="return" qname="{http://msa}>gapsTrimmingResponse>return" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegapsTrimmingparametersgapsTrimming_inputargs0gapsTrimming_outputinputGapsTrimmed_MSAResults
bb7ffcaf-89f4-4e57-95c1-6604dbcacb03
2015-11-16 19:41:54.527 UTC
b573a110-89ef-4d9b-834a-c37455cf8f04
2015-11-16 19:39:50.236 UTC
Display_a_multiple_sdirect_data00
15 449
_T.k9_ TAAAAAAAGG CTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCTTAA
_T.k.10_ ---------- --CAAACTGG GATTAGATAC CCCACTATGC CTAGCCTTAA
_T.k1_ ---------- -TCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.k2_ -TAAAAAGGC TTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.k7_ -TAAAAAGGC TTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.k4_ ---------- -TCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.k3_ -TAAAAAGGC TTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.k8_ --TAAAAAGC TTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.m15_ ---AAAAAGC TTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.m16_ --TAAAAAGC TTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.ablolab---------- ---------- ---------- ---------- ----------
_T.a11_ --TAAAAAGC TTCAAACTGG GATTAGATAC CCCACTATGC CTAGCCATAA
_T.p13_ ---------C TTCAAACTGG GATTAGATAC CCCACTATGC CTAACTATAA
_T.p14_ ---------- ---------- ---------- ----CTATGC CTAACTATAA
_T.p9_ -TAAAAAAGG CTCAAACTGG GATTAGATAC CCCACTATGC CTAGCTATAA
CACACAATCA AACTACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACTACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CACACAATCA AACCACG-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
-----GAT-A AACTCCGCAG TTGTGTCGCC AATACAACTA CGAGTAATAC
CACACAATCA AACTACA-AA TTGT-TCGCC AA-ACAACTA CGAGTAATAC
CATACAATCA AACTACA-AA TTGT-TCGCC AA-ACAACTA CGAGAAATAC
CATACAATCA AACTACA-AA TTGT-TCGCC AA-ACAACTA CGAGAAATAC
CACACAATCA AACTACA-AA TTGT-TCGCC AA-ACAACTA CGAGAAATAC
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCA-CCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCA-CCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCAGCCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA CCCCGACCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGN CGGTACTTCA CCCCGACCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA TCCCGACCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA TCCCGACCTA GAGGAGCCTG
TTAAAACTTA AAAGACTTGA CGGTACTTCA TCCCGACCTA GAGGAGCCTG
TCCAATAACC GACAACCCAC GATTAACCCA ACCACTTCTC GCCCAACAGT
TCCAATAACC GACAACCCAC GATTAACCCA ACCACTTCTC GCCCAACAGT
TCCAATAACC GACAATCCAC GATTAACCCA ACCACTTCTC GCCTAACAGT
TCCAATAACC GACAATCCAC GATTAACCCA ACCACTTCTC GCCTAACAGT
TCCAATAACC GACAATCCAC GATTAACCCA ACCACTTCTC GCCTAACAGT
TCCAATAACC GACAATCCAC GATTAACCCA ACCACTTCTC GCCTAACAGT
TCCAATAACC GACAATCCAC GATTAACCCA ACCACTTCTC GCCTAACAGT
TCCAATAACC GACAATCCAC GATTAACCCA ACCACTTCTC GCCTAACAGT
TCCAATAACC GATAACCCAC GATTAACCCA ACCACTTCTC GCCCAACAGT
TCCAATAACC GATAACCCAC GATTAACCCA ACCACTTCTC GCCCAACAGT
TCTAATAACC GATAACCCAC GATTAACCCA ACCACTTCTT GCCCCACAGT
TCTAATAACC GATAACCCAC GATTAACCCA ACCACTTCTT GCCCCACAGT
TCTAATAACC GATAACCCAC GATTAACCCA ACCACTTCTT GCCCTACAGT
TCTAATAACC GATAACCCAC GATTAACCCA ACCACTTCTT GCCCTACAGT
TCTAATAACC GATAACCCAC GATTAACCCA ACCACTTCTT GCCCTACAGT
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGTCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGTCAG CTTACCTTGT AAAAGAAATA AAGTGAGCTA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCCA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCCA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCCA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCCA
CTATATACCG CCGTCGCCAG CTTACCTTGT AAAAGAAATA AAGTGAGCCA
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AACAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACTCA TGAAGTGGAC
AATAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACCTA TGAAGAGG-C
AATAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACCTA TGAAGAGG-C
AATAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACCTA TGAAGAGG-T
AATAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACCTA TGAAGAGG-T
AATAGTAACA CACTAAAACG ACAGGTCGAG GTGTAACCTA TGAAGAGG-T
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTCTGATATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTCTGATATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTATGAAATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTATGAAATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTATGAAATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTATGAAATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTATGAAATT
CAAGATGGGC TACATTCTCC AATAGAGCAC ACGAACAACA CTATGAAATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTATGAAATT
CAAGATGGGC TACATTCTCC AACAGAGCAC ACGAACAACA CTATGAAATT
TAAGATGGGC TACATTCTCT AACAGAGA-T ACGAACAACA CTATGAAATT
TAAGATGGGC TACATTCTCT AACAGAGA-T ACGAACAACA CTATGAAATT
TAAGATGGGC TACATTCTCC AACAGAGAAC ACGAACAACA CTATGAAATT
TAAGATGGGC TACATTCTCC AACAGAGAAC ACGAACAACA CTATGAAATT
TAAGATGGGC TACATTCTTT AACAGAGAAT ACGAACAACA CTATGAAATT
AGCGTTTGAA GGCGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGCGTTTGAA GGCGGATTTA GCAGTAAGAT AAGAATGAAT AAAATACTTA
AGTGTTCGAA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGTGTTCGAA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGTGTTCGAA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGTGTTCGAA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGTGTTCGAA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGTGTTCGAA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGTGTTCGAA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGT-----AA GGAGGATTTA GCAGTAAGAT AAGAAT---- AAAATACTTA
AGTGTTCGAA GGCGGATTTA GCAGTAAGAT AAGAAT---- AGAACACCTA
AGTGTTCGAA GGCGGATTTA GCAGTAAGAT AAGAAT---- AGAACACCTA
AGTGTTCAAA GGCGGATTTA GCAGTAAGAT AAGAAT---- AGAACACCTA
AGTGTTCAAA GGCGGATTTA GCAGTAAGAT AAGAAT---- AGAACACCTA
AATGTTCAAA GGCGGATTTA GCAGTAAGAT AAGAAT---- AGAACACCTA
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTTG--
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTT---
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTTG--
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTTG--
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTTG--
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGT- AC-------
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCC-----
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTCTGG
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTCTG-
ACTGAACATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCT----
ACTGAAAATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTTGG-
ACTGAAAATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTTG--
ACTGAAAATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTCTGG
ACTGAAAATA ACGCAATGAA GTGCGCACAC ACCGCCCGTC ACCCTCTG-
ACTGAAAATA ACGCAATGAA G--------- ---------- ---------
2015-09-25 15:20:29.596 UTC
outfile0report0jobStatus0run_showAlignparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
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http://wsembnet.vital-it.ch/soaplab2/typed/services/alignment_multiple.showalign?wsdl
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_showAlign_inputsequence0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
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<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="run" name="parameters" qname="{http://soaplab.org/showalign}run"><s:elements><s:complextype optional="false" unbounded="false" typename="sequenceInput" name="sequence" qname="appInputs>sequence"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The sequence alignment to be displayed.</xsd:documentation></xsd:annotation><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="direct_data" qname="sequenceInput>direct_data" /><s:basetype optional="true" unbounded="false" typename="string" name="usa" qname="sequenceInput>usa" /><s:basetype optional="true" unbounded="false" typename="string" name="sformat" qname="sequenceInput>sformat" /><s:basetype optional="true" unbounded="false" typename="int" name="sbegin" qname="sequenceInput>sbegin"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Start of sequence(s) to be used
</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="send" qname="sequenceInput>send"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>End of sequence(s) to be used
</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="sprotein" qname="sequenceInput>sprotein"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence is protein</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="snucleotide" qname="sequenceInput>snucleotide"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence is nucleotide</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="sreverse" qname="sequenceInput>sreverse"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Reverse (if DNA)</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="slower" qname="sequenceInput>slower"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Make lower case</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="supper" qname="sequenceInput>supper"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Make upper case</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype><s:basetype optional="true" unbounded="false" typename="string" name="matrix_direct_data" qname="appInputs>matrix_direct_data" /><s:basetype optional="true" unbounded="false" typename="string" name="matrix_url" qname="appInputs>matrix_url" /><s:basetype optional="true" unbounded="false" typename="string" name="refseq" qname="appInputs>refseq"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>If you give the number in the alignment or the name of a
sequence, it will be taken to be the reference sequence. The
reference sequence is always shown in full and is the one against
which all the other sequences are compared. If this is set to 0
then the consensus sequence will be used as the reference
sequence. By default the consensus sequence is used as the
reference sequence.</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="bottom" qname="appInputs>bottom"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>If this is true then the reference sequence is displayed at
the bottom of the alignment instead of the top.</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="show" qname="appInputs>show" /><s:basetype optional="true" unbounded="false" typename="string" name="order" qname="appInputs>order" /><s:basetype optional="true" unbounded="false" typename="boolean" name="similarcase" qname="appInputs>similarcase"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>If this is set True, then when -show is set to
'Similarities' or 'Non-identities' and a residue is similar but
not identical to the reference sequence residue, it will be
changed to lower-case. If -show is set to 'All' then
non-identical, non-similar residues will be changed to lower-case.
If this is False then no change to the case of the residues is
made on the basis of their similarity to the reference sequence.</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="consensus" qname="appInputs>consensus"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>If this is true then the consensus line is displayed.</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="uppercase" qname="appInputs>uppercase"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Regions to put in uppercase.
If this is left blank, then the sequence case is left alone.
A set of regions is specified by a set of pairs of positions.
The positions are integers.
They are separated by any non-digit, non-alpha character.
Examples of region specifications are:
24-45, 56-78
1:45, 67=99;765..888
1,5,8,10,23,45,57,99</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="number" qname="appInputs>number"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>If this option is true then a line giving the positions in
the alignment is displayed every 10 characters above the
alignment.</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="ruler" qname="appInputs>ruler"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>If this option is true then a ruler line marking every 5th
and 10th character in the alignment is displayed.</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="long" name="width" qname="appInputs>width" /><s:basetype optional="true" unbounded="false" typename="long" name="margin" qname="appInputs>margin"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>This sets the length of the left-hand margin for sequence
names. If the margin is set at 0 then no margin and no names are
displayed. If the margin is set to a value that is less than the
length of a sequence name then the sequence name is displayed
truncated to the length of the margin. If the margin is set to -1
then the minimum margin width that will allow all the sequence
names to be displayed in full plus a space at the end of the name
will automatically be selected.</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="html" qname="appInputs>html" /><s:basetype optional="true" unbounded="false" typename="string" name="highlight" qname="appInputs>highlight"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Regions to colour if formatting for HTML.
If this is left blank, then the sequence is left alone.
A set of regions is specified by a set of pairs of positions.
The positions are integers.
They are followed by any valid HTML font colour.
Examples of region specifications are:
24-45 blue 56-78 orange
1-100 green 120-156 red
A file of ranges to colour (one range per line) can be specified
as '@filename'.</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="float" name="plurality" qname="appInputs>plurality"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Set a cut-off for the % of positive scoring matches below
which there is no consensus. The default plurality is taken as 50%
of the total weight of all the sequences in the alignment.</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="float" name="setcase" qname="appInputs>setcase"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sets the threshold for the scores of the positive matches
above which the consensus is in upper-case and below which the
consensus is in lower-case. By default this is set to be half of
the (weight-adjusted) number of sequences in the alignment.</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="float" name="identity" qname="appInputs>identity"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Provides the facility of setting the required number of
identities at a position for it to give a consensus. Therefore, if
this is set to 100% only columns of identities contribute to the
consensus.</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="gaps" qname="appInputs>gaps"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>If this option is true then gap characters can appear in
the consensus. The alternative is 'N' for nucleotide, or 'X' for
protein</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions>
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<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="sequenceInput" name="sequence" qname="appInputs>sequence"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The sequence alignment to be displayed.</xsd:documentation></xsd:annotation><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="direct_data" qname="sequenceInput>direct_data" /><s:basetype optional="true" unbounded="false" typename="string" name="usa" qname="sequenceInput>usa" /><s:basetype optional="true" unbounded="false" typename="string" name="sformat" qname="sequenceInput>sformat" /><s:basetype optional="true" unbounded="false" typename="int" name="sbegin" qname="sequenceInput>sbegin"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Start of sequence(s) to be used
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</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="sprotein" qname="sequenceInput>sprotein"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence is protein</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="snucleotide" qname="sequenceInput>snucleotide"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence is nucleotide</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="sreverse" qname="sequenceInput>sreverse"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Reverse (if DNA)</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="slower" qname="sequenceInput>slower"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Make lower case</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="supper" qname="sequenceInput>supper"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Make upper case</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions>
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0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="clear" name="parameters" qname="{http://soaplab.org/typedws}clear"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResults" name="parameters" qname="{http://soaplab.org/typedws}getResults"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokenestedjobId0jobStatus00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.5</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>jobStatus</name>
<depth>0</depth>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + jobStatus.matches(".*RUNNING.*");
if ("true".matches(loop)) {
Thread.sleep(1000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_outputinput0outfile00report00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
report
0
'text/plain'
0
detailed_status
0
'text/plain'
0
outfile
0
'text/plain'
0
outfile_url
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResultsResponse" name="parameters" qname="{http://soaplab.org/showalign}getResultsResponse"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="report" qname="appResults>report" /><s:basetype optional="true" unbounded="false" typename="long" name="detailed_status" qname="appResults>detailed_status" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile" qname="appResults>outfile" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile_url" qname="appResults>outfile_url" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_showAlignparametersclearparametersgetResultsparametersrun_showAlign_inputsequenceshowAlign_sequencedirect_datarun_showAlign_outputinputclear_inputjobIdclear_jobIdjobIdgetResults_inputjobIdgetResults_jobIdjobIdnestedjobIdgetResults_outputinputoutfilereportjobStatus
61ae19f3-9e53-4484-9746-fdce7a423360
2015-09-25 15:27:51.8 UTC
33f24c6b-4d92-4797-8890-d13c383c4ae8
2015-09-25 15:25:37.872 UTC
Display a multiple sequence alignment in pretty format
2015-09-25 15:13:29.814 UTC
93d5a546-13fb-421a-a9c0-8f88389b0958
2015-09-25 15:34:55.171 UTC
cf8d6cbe-3b1b-4b98-bd43-19cfb41cb5b8
2015-09-25 15:41:46.837 UTC
16ceadbe-f990-41a3-b24c-6286a494fb19
2015-11-02 10:26:30.218 UTC
688e86a8-e309-40cf-ba19-0bddc81481e5
2015-09-25 15:20:41.877 UTC
Workflow15outgrno00
13
2015-10-13 16:40:37.878 UTC
intreefile00
/home/kasikrit/apache-tomcat-8.0.26/webapps/soaplab2/results/[phylogeny_molecular_sequence.fdnapars]_5f731ccb.153ad11c847._7fb6_outtreefile.treefile
2016-03-25 20:50:55.886 UTC
jobId0jobStatus0outfile0outtreefile0report0getResultsparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_consensus.fconsense?wsdl
getResults
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclearparameters0net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_consensus.fconsense?wsdl
clear
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_fconsense_local_outputinput0jobId00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
jobId
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="runResponse" name="parameters" qname="{http://soaplab.org/typedws}runResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="runResponse>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeroot_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResults" name="parameters" qname="{http://soaplab.org/typedws}getResults"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_outputinput0outfile00outtreefile00report00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
report
0
'text/plain'
0
detailed_status
0
'text/plain'
0
outfile
0
'text/plain'
0
outfile_url
0
'text/plain'
0
outtreefile
0
'text/plain'
0
outtreefile_url
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResultsResponse" name="parameters" qname="{http://soaplab.org/fconsense}getResultsResponse"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="report" qname="appResults>report" /><s:basetype optional="true" unbounded="false" typename="long" name="detailed_status" qname="appResults>detailed_status" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile" qname="appResults>outfile" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile_url" qname="appResults>outfile_url" /><s:basetype optional="true" unbounded="false" typename="string" name="outtreefile" qname="appResults>outtreefile" /><s:basetype optional="true" unbounded="false" typename="string" name="outtreefile_url" qname="appResults>outtreefile_url" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokenestedjobId0jobStatus00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.5</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>jobStatus</name>
<depth>0</depth>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + jobStatus.equals("RUNNING");
if ("true".matches(loop)) {
Thread.sleep(2000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="clear" name="parameters" qname="{http://soaplab.org/typedws}clear"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerunparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_consensus.fconsense?wsdl
run
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_inputroot0intreefile0outgrno0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
intreefile
0
'text/plain'
false
method
0
'text/plain'
false
mlfrac
0
'text/plain'
false
root
0
'text/plain'
false
outgrno
0
'text/plain'
false
trout
0
'text/plain'
false
progress
0
'text/plain'
false
treeprint
0
'text/plain'
false
prntsets
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="run" name="parameters" qname="{http://soaplab.org/fconsense}run"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="intreefile" qname="appInputs>intreefile" /><s:basetype optional="true" unbounded="false" typename="string" name="method" qname="appInputs>method" /><s:basetype optional="true" unbounded="false" typename="float" name="mlfrac" qname="appInputs>mlfrac" /><s:basetype optional="true" unbounded="false" typename="boolean" name="root" qname="appInputs>root" /><s:basetype optional="true" unbounded="false" typename="long" name="outgrno" qname="appInputs>outgrno" /><s:basetype optional="true" unbounded="false" typename="boolean" name="trout" qname="appInputs>trout" /><s:basetype optional="true" unbounded="false" typename="boolean" name="progress" qname="appInputs>progress" /><s:basetype optional="true" unbounded="false" typename="boolean" name="treeprint" qname="appInputs>treeprint" /><s:basetype optional="true" unbounded="false" typename="boolean" name="prntsets" qname="appInputs>prntsets" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResultsparametersclearparametersrun_fconsense_local_outputinputgetResults_inputjobIdgetResults_jobIdjobIdgetResults_outputinputnestedjobIdclear_inputjobIdclear_jobIdjobIdrunparametersrun_inputrootrun_inputintreefilerun_inputoutgrnojobIdjobStatusoutfileouttreefilereport
acf9e94b-359e-48a7-8918-af02132520b6
2015-10-15 16:45:57.109 UTC
a272ee07-dcda-487c-a8dc-62bd74c6e4e9
2016-03-25 20:50:58.285 UTC
bda6819e-5610-452a-be2f-288737541799
2015-10-15 17:24:00.626 UTC
bade0670-136d-4c08-95b2-b23281777128
2015-10-15 18:52:48.37 UTC
f6c52767-49a3-409e-90ab-f96c5ff7f31b
2015-10-13 16:11:35.61 UTC
8a4976e2-0ce9-4ba3-92fb-f53cb75f65a4
2015-10-15 16:59:38.956 UTC
ad115fcf-5f88-41d7-b6f2-1bb62e230c55
2015-10-15 17:26:09.21 UTC
e666ce8b-8df6-487b-8d4d-0f6a425f18aa
2015-10-15 16:28:11.909 UTC
a63183cf-6275-4c91-b0a7-6ab64902adc7
2015-10-15 17:07:09.430 UTC
b8c8f940-7e0e-4239-94e7-04a929a5154e
2015-10-15 17:25:09.388 UTC
afc73992-cb34-4c97-bfeb-af1ac8bb31c0
2015-10-15 16:39:58.78 UTC
9ca54719-8360-402d-9ba4-cd83c937026d
2015-10-13 16:40:39.605 UTC
nestedjobId00jobStatus0getStatusparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_molecular_sequence.fseqboot?wsdl
getStatus
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatus" name="parameters" qname="{http://soaplab.org/typedws}getStatus"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_outputinput0jobStatus00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
jobStatus
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatusResponse" name="parameters" qname="{http://soaplab.org/typedws}getStatusResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobStatus" qname="jobStatus>jobStatus" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatusparametersgetStatus_inputjobIdgetStatus_jobIdjobIdgetStatus_outputinputjobStatus
8be89cba-f390-4a60-8f6d-945a118c2e2c
2015-10-07 07:52:43.689 UTC
nested
2015-10-07 07:51:45.967 UTC
nestedjobId00jobStatus0getStatusparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_distance_matrix.fneighbor?wsdl
getStatus
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatus" name="parameters" qname="{http://soaplab.org/typedws}getStatus"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_outputinput0jobStatus00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
jobStatus
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatusResponse" name="parameters" qname="{http://soaplab.org/typedws}getStatusResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobStatus" qname="jobStatus>jobStatus" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatusparametersgetStatus_inputjobIdgetStatus_jobIdjobIdgetStatus_outputinputjobStatus
nested
2015-10-13 10:57:37.346 UTC
5d8c75b7-b7ea-46ef-9aa2-f947e8d58a41
2015-10-13 10:58:05.991 UTC
nestedjobId00jobStatus0getStatusparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://wsembnet.vital-it.ch/soaplab2/typed/services/alignment_multiple.showalign?wsdl
getStatus
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatus" name="parameters" qname="{http://soaplab.org/typedws}getStatus"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getStatusRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_outputinput0jobStatus00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
jobStatus
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatusResponse" name="parameters" qname="{http://soaplab.org/typedws}getStatusResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobStatus" qname="jobStatus>jobStatus" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatusparametersgetStatus_inputjobIdgetStatus_jobIdjobIdgetStatus_outputinputjobStatus
ff99d381-6d9d-4d2e-91e2-c94daebd48c4
2015-09-25 15:20:42.75 UTC
nested
2015-09-25 15:17:12.18 UTC
Workflow7sequence00stype00
protein
dna
rna
2015-10-11 08:46:10.838 UTC
protein
2015-10-11 08:46:12.211 UTC
jobId0status0output0run_ebi_clustalOparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://www.ebi.ac.uk/Tools/services/soap/clustalo?wsdl
run
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResultparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://www.ebi.ac.uk/Tools/services/soap/clustalo?wsdl
getResult
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_ebi_clustalO_inputparameters0email0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
email
0
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false
title
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<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="run" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}run"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="email" qname=">run>email"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>User email address</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="title" qname=">run>title"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>A title to identify the analysis job</xsd:documentation></xsd:annotation></s:basetype><s:complextype optional="false" unbounded="false" typename="InputParameters" name="parameters" qname=">run>parameters"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The list of parameters to be used for launching the analysis</xsd:documentation></xsd:annotation><s:elements><s:basetype optional="true" unbounded="false" typename="boolean" name="guidetreeout" qname="InputParameters>guidetreeout"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output guide tree [Output guide tree.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="dismatout" qname="InputParameters>dismatout"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output distance matrix [Output distance matrix. This is only calculated if the mBed-like clustering guide tree is set to false.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="dealign" qname="InputParameters>dealign"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Dealign input sequences [Remove any existing alignment (gaps) from input sequences.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="mbed" qname="InputParameters>mbed"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>mBed-like clustering guide tree [This option uses a sample of the input sequences and then represents all sequences as vectors to these sequences, enabling much more rapid generation of the guide tree, especially when the number of sequences is large.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="mbediteration" qname="InputParameters>mbediteration"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>mBed-like clustering iteration [Use mBed-like clustering during subsequent iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="iterations" qname="InputParameters>iterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Number of iterations [Number of (combined guide-tree/HMM) iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="gtiterations" qname="InputParameters>gtiterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Maximum guide tree iterations [Having set the number of combined iterations, this parameter can be changed to limit the number of guide tree iterations within the combined iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="hmmiterations" qname="InputParameters>hmmiterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Maximum HMM iterations [Having set the number of combined iterations, this parameter can be changed to limit the number of HMM iterations within the combined iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="outfmt" qname="InputParameters>outfmt"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output alignment format [Format for generated multiple sequence alignment.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="order" qname="InputParameters>order"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output order [The order in which the sequences appear in the final alignment]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="stype" qname="InputParameters>stype"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence Type [Defines the type of the sequences to be aligned]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="sequence" qname="InputParameters>sequence"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence [Three or more sequences to be aligned can be entered directly into this box. Sequences can be be in GCG, FASTA, EMBL, GenBank, PIR, NBRF, PHYLIP or UniProtKB/Swiss-Prot format. Partially formatted sequences are not accepted. Adding a return to the end of the sequence may help certain applications understand the input. Note that directly using data from word processors may yield unpredictable results as hidden/control characters may be present.
There is currently a limit of 2000 sequences and 2MB of data.]</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeclustalO_inputsequence0stype0outfmt0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
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<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="InputParameters" name="parameters" qname=">run>parameters"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The list of parameters to be used for launching the analysis</xsd:documentation></xsd:annotation><s:elements><s:basetype optional="true" unbounded="false" typename="boolean" name="guidetreeout" qname="InputParameters>guidetreeout"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output guide tree [Output guide tree.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="dismatout" qname="InputParameters>dismatout"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output distance matrix [Output distance matrix. This is only calculated if the mBed-like clustering guide tree is set to false.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="dealign" qname="InputParameters>dealign"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Dealign input sequences [Remove any existing alignment (gaps) from input sequences.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="mbed" qname="InputParameters>mbed"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>mBed-like clustering guide tree [This option uses a sample of the input sequences and then represents all sequences as vectors to these sequences, enabling much more rapid generation of the guide tree, especially when the number of sequences is large.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="mbediteration" qname="InputParameters>mbediteration"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>mBed-like clustering iteration [Use mBed-like clustering during subsequent iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="iterations" qname="InputParameters>iterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Number of iterations [Number of (combined guide-tree/HMM) iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="gtiterations" qname="InputParameters>gtiterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Maximum guide tree iterations [Having set the number of combined iterations, this parameter can be changed to limit the number of guide tree iterations within the combined iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="hmmiterations" qname="InputParameters>hmmiterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Maximum HMM iterations [Having set the number of combined iterations, this parameter can be changed to limit the number of HMM iterations within the combined iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="outfmt" qname="InputParameters>outfmt"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output alignment format [Format for generated multiple sequence alignment.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="order" qname="InputParameters>order"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output order [The order in which the sequences appear in the final alignment]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="stype" qname="InputParameters>stype"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence Type [Defines the type of the sequences to be aligned]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="sequence" qname="InputParameters>sequence"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence [Three or more sequences to be aligned can be entered directly into this box. Sequences can be be in GCG, FASTA, EMBL, GenBank, PIR, NBRF, PHYLIP or UniProtKB/Swiss-Prot format. Partially formatted sequences are not accepted. Adding a return to the end of the sequence may help certain applications understand the input. Note that directly using data from word processors may yield unpredictable results as hidden/control characters may be present.
There is currently a limit of 2000 sequences and 2MB of data.]</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeemail_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
kasikrit@gmail.com
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclustal_numvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
clustal_num
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_ebi_clustalO_outputinput0jobId00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
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<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="runResponse" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}runResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname=">runResponse>jobId"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>A unique identifier for the analysis job</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResult_inputjobId0type0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
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<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResult" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}getResult"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname=">getResult>jobId"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>An identifier for the job to check</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="false" unbounded="false" typename="string" name="type" qname=">getResult>type"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The renderer to be used to format the output</xsd:documentation></xsd:annotation></s:basetype><s:arraytype optional="true" unbounded="false" wrapped="false" typename="wsRawOutputParameters" name="parameters" qname=">getResult>parameters"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>A list of parameters to be passed on to the renderer</xsd:documentation></xsd:annotation><s:elementtype><s:complextype optional="false" unbounded="false" typename="wsRawOutputParameter" name="" qname="{http://soap.jdispatcher.ebi.ac.uk}wsRawOutputParameter"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="wsRawOutputParameter>name"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The name of the parameter</xsd:documentation></xsd:annotation></s:basetype><s:arraytype optional="false" unbounded="false" wrapped="true" typename="ArrayOfString" name="value" qname="wsRawOutputParameter>value"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The parameter value as an array of String</xsd:documentation></xsd:annotation><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:elementtype></s:arraytype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResult_outputinput0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
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'text/xml'
java.lang.String
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output
0
'application/octet-stream'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResultResponse" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}getResultResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="base64Binary" name="output" qname=">getResultResponse>output"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Base64 encoded data corresponding to the output of the job formatted by the renderer</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokenestedjobId0status00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.5</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>status</name>
<depth>0</depth>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + status.matches(".*RUNNING.*");
if ("true".matches(loop)) {
Thread.sleep(2000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketype_pimvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
pim
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_ebi_clustalOparametersgetResultparametersrun_ebi_clustalO_inputparametersrun_ebi_clustalO_inputemailclustalO_inputsequenceclustalO_inputstypeclustalO_inputoutfmtrun_ebi_clustalO_outputinputgetResult_inputjobIdgetResult_inputtypegetResult_outputinputnestedjobIdjobIdstatusoutput
69914d41-2bd1-4699-b3ef-cd2a82aa031c
2015-10-17 12:40:56.616 UTC
d16660e9-7b1d-4266-9f59-8a746b674dde
2015-10-11 09:07:13.347 UTC
c63c9a44-c024-42c7-b9d5-d30ab7ba973c
2015-10-11 10:46:50.240 UTC
4b6d28ef-2619-45b8-947a-f14ad6c3e710
2015-10-11 08:57:17.246 UTC
fbc24586-97cf-471a-b011-f164cdbee929
2015-10-11 10:43:04.473 UTC
f8c3ed4c-363f-42d9-9309-2ac5bd1cc2ce
2015-10-11 08:55:31.309 UTC
85ed5936-381c-4b39-b6a3-8b3ed295d205
2015-10-11 09:08:07.998 UTC
0f5be853-39f8-47c2-8895-b6ea48b6adab
2015-10-11 10:46:08.157 UTC
7bdfffb0-1012-4059-8e6b-957d2714db9d
2015-10-11 08:58:35.396 UTC
0055fa36-bc7b-443b-89ec-3b84fd5f8429
2015-10-17 13:09:58.716 UTC
22984cf0-bc7b-4723-b94c-3f0ad74cd6cd
2015-10-11 09:05:29.774 UTC
Workflow8fseqbootfile00
/home/kasikrit/Taverna/NCBI_Dengue/DNA/Reps10/output-nogap.fseqboot
2015-10-16 14:44:59.301 UTC
jobId0outfile0report0outfile_url0jobStatus0fullPath_output0run_fdnadist_local_outputinput0jobId00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
jobId
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="runResponse" name="parameters" qname="{http://soaplab.org/typedws}runResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="runResponse>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResultsparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_molecular_sequence.fdnadist?wsdl
getResults
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclearparameters0net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_molecular_sequence.fdnadist?wsdl
clear
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResults" name="parameters" qname="{http://soaplab.org/typedws}getResults"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_outputinput0outfile00report00outfile_url00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
report
0
'text/plain'
0
detailed_status
0
'text/plain'
0
outfile
0
'text/plain'
0
outfile_url
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResultsResponse" name="parameters" qname="{http://soaplab.org/fdnadist}getResultsResponse"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="report" qname="appResults>report" /><s:basetype optional="true" unbounded="false" typename="long" name="detailed_status" qname="appResults>detailed_status" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile" qname="appResults>outfile" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile_url" qname="appResults>outfile_url" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="clear" name="parameters" qname="{http://soaplab.org/typedws}clear"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatusjobId0jobStatus00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.5</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>jobStatus</name>
<depth>0</depth>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + jobStatus.equals("RUNNING");
if ("true".matches(loop)) {
Thread.sleep(2000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeauto_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokemethod_valuevalue00
[F84 distance model] Choose the method to
use (Values: f (F84 distance model); k
(Kimura 2-parameter distance); j
(Jukes-Cantor distance); l (LogDet
distance); s (Similarity table))
2015-10-12 15:52:23.815 UTC
net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
k
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_fdnadist_local2parameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_molecular_sequence.fdnadist?wsdl
run
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_fdnadist_local2_inputauto0method0fseqbootfile0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
fseqbootfile
0
'text/plain'
false
method
0
'text/plain'
false
gamma
0
'text/plain'
false
ncategories
0
'text/plain'
false
rate
0
'text/plain'
false
categories_direct_data
0
'text/plain'
false
categories_url
0
'text/plain'
false
weights_direct_data
0
'text/plain'
false
weights_url
0
'text/plain'
false
gammacoefficient
0
'text/plain'
false
invarfrac
0
'text/plain'
false
ttratio
0
'text/plain'
false
freqsfrom
0
'text/plain'
false
basefreq
0
'text/plain'
false
lower
0
'text/plain'
false
humanreadable
0
'text/plain'
false
printdata
0
'text/plain'
false
auto
0
'text/plain'
false
progress
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="run" name="parameters" qname="{http://soaplab.org/fdnadist}run"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="fseqbootfile" qname="appInputs>fseqbootfile"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>File containing one or more sequence alignments</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="method" qname="appInputs>method" /><s:basetype optional="true" unbounded="false" typename="string" name="gamma" qname="appInputs>gamma" /><s:basetype optional="true" unbounded="false" typename="long" name="ncategories" qname="appInputs>ncategories" /><s:basetype optional="true" unbounded="false" typename="string" name="rate" qname="appInputs>rate" /><s:basetype optional="true" unbounded="false" typename="string" name="categories_direct_data" qname="appInputs>categories_direct_data" /><s:basetype optional="true" unbounded="false" typename="string" name="categories_url" qname="appInputs>categories_url" /><s:basetype optional="true" unbounded="false" typename="string" name="weights_direct_data" qname="appInputs>weights_direct_data" /><s:basetype optional="true" unbounded="false" typename="string" name="weights_url" qname="appInputs>weights_url" /><s:basetype optional="true" unbounded="false" typename="float" name="gammacoefficient" qname="appInputs>gammacoefficient" /><s:basetype optional="true" unbounded="false" typename="float" name="invarfrac" qname="appInputs>invarfrac" /><s:basetype optional="true" unbounded="false" typename="float" name="ttratio" qname="appInputs>ttratio" /><s:basetype optional="true" unbounded="false" typename="boolean" name="freqsfrom" qname="appInputs>freqsfrom" /><s:basetype optional="true" unbounded="false" typename="string" name="basefreq" qname="appInputs>basefreq" /><s:basetype optional="true" unbounded="false" typename="boolean" name="lower" qname="appInputs>lower" /><s:basetype optional="true" unbounded="false" typename="boolean" name="humanreadable" qname="appInputs>humanreadable" /><s:basetype optional="true" unbounded="false" typename="boolean" name="printdata" qname="appInputs>printdata" /><s:basetype optional="true" unbounded="false" typename="boolean" name="auto" qname="appInputs>auto" /><s:basetype optional="true" unbounded="false" typename="boolean" name="progress" qname="appInputs>progress" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGETFILEPATHJobId0fullPath_output00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_fdnadist_local_outputinputgetResultsparametersclearparametersgetResults_inputjobIdgetResults_jobIdjobIdgetResults_outputinputclear_inputjobIdclear_jobIdjobIdgetStatusjobIdrun_fdnadist_local2parametersrun_fdnadist_local2_inputautorun_fdnadist_local2_inputmethodrun_fdnadist_local2_inputfseqbootfileGETFILEPATHJobIdjobIdoutfilereportoutfile_urljobStatusfullPath_output
a0d9f474-48d1-4c5a-bc0b-05897dd5596f
2015-10-12 15:53:09.113 UTC
9c3a2992-aa5b-4684-a2c6-bce079cc85ea
2015-10-15 14:31:09.997 UTC
0be7d744-90c9-4199-83ca-fb8582e46386
2015-10-08 19:09:37.367 UTC
c03ab233-cd68-4165-b8ef-5fa7349daab2
2015-10-16 14:45:00.863 UTC
cbf01db7-7b9d-4e9b-a5bf-80bebd52b187
2015-10-08 19:09:09.568 UTC
9d157725-b3ea-49a6-ab37-5fc1b9caf1a4
2015-10-16 15:57:22.263 UTC
3deebde7-0b23-4262-bdc1-c91b82f325b3
2015-10-15 14:33:11.749 UTC
c8533ee7-4ae6-45da-b4c6-9c5ab174eb8e
2015-10-16 15:54:36.228 UTC
6e9373a2-64f0-4b5a-8dc3-4fcf735ca95a
2015-10-12 15:42:10.583 UTC
6a86d9ff-54d4-41aa-91dc-f45a163929f7
2015-10-12 15:46:38.264 UTC
Workflow1pimDirectData00
#
#
# Percent Identity Matrix - created by Clustal2.1
#
#
1: JN697058 100.00 67.94 67.66 67.73 67.66 67.66 67.66 67.66 67.66 67.66 67.66 67.66 67.66
2: KF744401 67.94 100.00 92.17 92.15 92.17 92.17 92.17 92.17 92.17 92.17 92.17 92.17 92.17
3: KF744397 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00
4: KF744398 67.73 92.15 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00
5: KF744399 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00
6: KF744400 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00
7: KF744402 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00
8: KF744403 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00
9: KF744404 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00
10: KF744405 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00
11: KF744406 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00
12: KF744407 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00
13: KF744408 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00
2015-10-25 18:49:47.571 UTC
algorithm0MSASimScores0BeanshellsimScore0algorithm00net.sf.taverna.t2.activitiesbeanshell-activity1.5net.sf.taverna.t2.activities.beanshell.BeanshellActivity
simScore
0
text/plain
java.lang.String
true
algorithm
0
0
workflow
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecalSimilarityScoreparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/axis2/services/MSASimilarityEstimation?wsdl
calSimilarityScore
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecalSimilarityScore_inputargs00output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
args0
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="calSimilarityScore" name="parameters" qname="{http://service.pojo.sample}calSimilarityScore"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="args0" qname="{http://service.pojo.sample}>calSimilarityScore>args0" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecalSimilarityScore_outputinput0return00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
return
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="calSimilarityScoreResponse" name="parameters" qname="{http://service.pojo.sample}calSimilarityScoreResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="double" name="return" qname="{http://service.pojo.sample}>calSimilarityScoreResponse>return" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeBeanshellsimScorecalSimilarityScoreparameterscalSimilarityScore_inputargs0calSimilarityScore_outputinputalgorithmMSASimScores
15372ff4-1007-4606-bbf8-f941582dbbce
2015-10-25 19:28:31.663 UTC
ec036e9d-847a-4067-9cdb-4bdfd6b405c0
2015-10-25 19:07:10.92 UTC
9eafc07e-e4bb-4bbc-9a2f-67fb8c6dc445
2015-10-25 19:05:47.313 UTC
add90e00-d97e-4340-a504-e874ff836d55
2015-10-25 19:27:20.2 UTC
c7a35313-a57d-460b-b134-79d34430af0e
2015-10-25 19:24:40.801 UTC
f4fe6d02-5b4e-40c6-9ee2-7fdede751c97
2015-10-25 19:15:44.377 UTC
98e18c06-5ad1-47dd-81f0-6b72b0347139
2015-10-25 18:54:09.625 UTC
2c77ac78-97bf-48ef-9493-5a818d530fde
2015-10-25 19:14:55.775 UTC
62697098-c92f-4fe3-b5f3-01d09ce685a5
2015-10-25 19:03:14.81 UTC
47333da1-a3f3-47e4-8298-ef9f20c1d02f
2015-10-25 19:14:28.491 UTC
8e6fb7e0-b0e5-465b-a8f1-58f8597922b3
2015-10-25 18:49:48.924 UTC
13308502-5252-4f82-818d-b74fb98008a2
2016-03-25 20:32:14.301 UTC
ccb1e039-8baf-444e-890a-4da8d461ae25
2015-10-25 19:22:46.792 UTC
15d4bd92-0a81-416c-8e63-5669d5ef03f9
2015-10-26 16:49:57.473 UTC
9fe5ee5e-e9b2-4fe6-92cc-4e2fff8b3cae
2015-10-25 19:18:24.873 UTC
9cce5295-5f15-40db-bee5-2adf14e2ebed
2015-10-25 18:59:05.397 UTC
531b7882-a878-4075-8323-4618545b678c
2016-03-25 20:37:57.117 UTC
a52295f1-3684-43b6-b36d-3d764e00e3f5
2015-10-25 19:17:09.72 UTC
08b3a7ac-8bd2-4625-a582-5a21fac67998
2015-10-25 18:49:29.706 UTC
Workflow20datafile_reference00outgrno00jobId0jobStatus0outfile0outtreefile0report0fullPath_outfile0fullPath_treefile0getResultsparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_distance_matrix.fneighbor?wsdl
getResults
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclearparameters0net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_distance_matrix.fneighbor?wsdl
clear
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_fneighbor_local_outputinput0jobId00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
jobId
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="runResponse" name="parameters" qname="{http://soaplab.org/typedws}runResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="runResponse>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResults" name="parameters" qname="{http://soaplab.org/typedws}getResults"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="getResultsRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResults_outputinput0outfile00outtreefile00report00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
report
0
'text/plain'
0
detailed_status
0
'text/plain'
0
outfile
0
'text/plain'
0
outfile_url
0
'text/plain'
0
outtreefile
0
'text/plain'
0
outtreefile_url
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResultsResponse" name="parameters" qname="{http://soaplab.org/fneighbor}getResultsResponse"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="report" qname="appResults>report" /><s:basetype optional="true" unbounded="false" typename="long" name="detailed_status" qname="appResults>detailed_status" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile" qname="appResults>outfile" /><s:basetype optional="true" unbounded="false" typename="string" name="outfile_url" qname="appResults>outfile_url" /><s:basetype optional="true" unbounded="false" typename="string" name="outtreefile" qname="appResults>outtreefile" /><s:basetype optional="true" unbounded="false" typename="string" name="outtreefile_url" qname="appResults>outtreefile_url" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/xml'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="clear" name="parameters" qname="{http://soaplab.org/typedws}clear"><s:elements><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclear_jobIdjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
jobId
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="jobId" name="jobId" qname="clearRequest>jobId"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname="jobId>jobId" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatusjobId0jobStatus00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.5</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>jobStatus</name>
<depth>0</depth>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + jobStatus.equals("RUNNING");
if ("true".matches(loop)) {
Thread.sleep(2000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGETFILEPATHJobId0fullPath_outfile00fullPath_treefile00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerunparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://bioservices.sci.psu.ac.th/soaplab2/typed/services/phylogeny_distance_matrix.fneighbor?wsdl
run
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_inputoutgrno0dafafile_ref0auto0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
dafafile_ref
0
'text/plain'
false
outgrno
0
'text/plain'
false
matrixtype
0
'text/plain'
false
treetype
0
'text/plain'
false
jumble
0
'text/plain'
false
seed
0
'text/plain'
false
replicates
0
'text/plain'
false
trout
0
'text/plain'
false
printdata
0
'text/plain'
false
auto
0
'text/plain'
false
progress
0
'text/plain'
false
treeprint
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="run" name="parameters" qname="{http://soaplab.org/fneighbor}run"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="dafafile_ref" qname="appInputs>dafafile_ref" /><s:basetype optional="true" unbounded="false" typename="long" name="outgrno" qname="appInputs>outgrno" /><s:basetype optional="true" unbounded="false" typename="string" name="matrixtype" qname="appInputs>matrixtype" /><s:basetype optional="true" unbounded="false" typename="string" name="treetype" qname="appInputs>treetype" /><s:basetype optional="true" unbounded="false" typename="boolean" name="jumble" qname="appInputs>jumble" /><s:basetype optional="true" unbounded="false" typename="long" name="seed" qname="appInputs>seed" /><s:basetype optional="true" unbounded="false" typename="boolean" name="replicates" qname="appInputs>replicates" /><s:basetype optional="true" unbounded="false" typename="boolean" name="trout" qname="appInputs>trout" /><s:basetype optional="true" unbounded="false" typename="boolean" name="printdata" qname="appInputs>printdata" /><s:basetype optional="true" unbounded="false" typename="boolean" name="auto" qname="appInputs>auto" /><s:basetype optional="true" unbounded="false" typename="boolean" name="progress" qname="appInputs>progress" /><s:basetype optional="true" unbounded="false" typename="boolean" name="treeprint" qname="appInputs>treeprint" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeauto_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
true
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResultsparametersclearparametersrun_fneighbor_local_outputinputgetResults_inputjobIdgetResults_jobIdjobIdgetResults_outputinputclear_inputjobIdclear_jobIdjobIdgetStatusjobIdGETFILEPATHJobIdrunparametersrun_inputoutgrnorun_inputdafafile_refrun_inputautojobIdjobStatusoutfileouttreefilereportfullPath_outfilefullPath_treefile
f4139a76-0b02-4789-ade8-0bb2ce23041a
2015-10-16 17:23:40.900 UTC
0096fb26-cbd2-4fcf-a533-ab0645a19bf1
2015-10-13 10:58:05.783 UTC
dee66356-aaec-4f33-99f5-2398d8498a08
2015-10-17 05:34:37.323 UTC
32042595-6173-4f3f-87ed-5e028445b9f8
2015-10-13 10:59:23.147 UTC
4b10d549-fc54-4ae5-8530-ac10721e681f
2015-11-02 16:15:10.774 UTC
315d3a48-4e21-4305-9d0b-f234a1c538ca
2015-10-16 17:26:09.656 UTC
7ffba865-1282-4d9f-81b8-b54eac3c9e78
2015-10-17 05:36:01.758 UTC
5931cc21-96b8-49b6-9a33-eb2297f58164
2015-11-02 16:21:00.681 UTC
93f2f627-9921-4698-8b48-798ab1912fd9
2015-11-02 16:16:51.377 UTC
Workflow14sequence00output_pim0SimilarityScore0jobId0status0algorithm0CLUSTALO_PIMstype0sequence0output00jobId00status00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMSA_SIMILARITYpimDirectData0MSASimScores00algorithm00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
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net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokestype_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
dna
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
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0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeCLUSTALO_PIMstypeCLUSTALO_PIMsequenceMSA_SIMILARITYpimDirectDataoutput_pimSimilarityScorejobIdstatusalgorithm
c1dd0dc0-9547-472a-aa85-2b3340352019
2016-03-25 20:32:53.35 UTC
a8402ac3-0dfa-4ad9-9120-0f72f85a5e91
2016-03-25 20:38:24.691 UTC
e640d779-73b9-46d7-bdb3-ebdaf5ac1f23
2015-11-17 07:39:09.487 UTC
050555f4-3d89-477f-91b1-bdccc94e3a3f
2015-10-26 17:02:06.475 UTC
08a75006-50ad-46fa-b32c-09bb1bad6d1c
2016-03-25 20:35:26.71 UTC
29899649-897b-40ac-9792-173fb61aa8a3
2015-10-26 16:55:46.660 UTC