Workflow14A_Set_of_Seqs_Fasta00 >Tk1x TCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAACACACAATCAAACCACGAATT GTTCGCCAAACAACTACGAGTAATACTTAAAACTTAAAAGACTTGACGGTACTTCACCCC AGCCTAGAGGAGCCTGTCCAATAACCGACAATCCACGATTAACCCAACCACTTCTCGCCT AACAGTCTATATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGTGAGCTAAACA GTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAGATGGGCTACA TTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTGTTCGAAGGAGGATTTAGCAG TAAGATAAGAATAAAATACTTAACTGAACATAACGCAATGAAGTGCGCACACACCGCCCG TCACCCTTG >Tk2x TAAAAAGGCTTCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAACACACAATCAA ACCACGAATTGTTCGCCAAACAACTACGAGTAATACTTAAAACTTAAAAGACTTGACGGT ACTTCACCCCAGCCTAGAGGAGCCTGTCCAATAACCGACAATCCACGATTAACCCAACCA CTTCTCGCCTAACAGTCTATATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGT GAGCTAAACAGTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAG ATGGGCTACATTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTGTTCGAAGGAG GATTTAGCAGTAAGATAAGAATAAAATACTTAACTGAACATAACGCAATGAAGTGCGCAC ACACCGCCCGTCACCCTTG >Tk3x TAAAAAGGCTTCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAACACACAATCAA ACCACGAATTGTTCGCCAAACAACTACGAGTAATACTTAAAACTTAAAAGACTTGACGGT ACTTCACCCCAGCCTAGAGGAGCCTGTCCAATAACCGACAATCCACGATTAACCCAACCA CTTCTCGCCTAACAGTCTATATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGT GAGCTAAACAGTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAG ATGGGCTACATTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTGTTCGAAGGAG GATTTAGCAGTAAGATAAGAATAAAATACTTAACTGAACATAACGCAATGAAGtGCGCAC ACACCGCCCGTCACCC >Tk4x TCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAACACACAATCAAACCACGAATT GTTCGCCAAACAACTACGAGTAATACTTAAAACTTAAAAGACTTGACGGTACTTCACCCC AGCCTAGAGGAGCCTGTCCAATAACCGACAATCCACGATTAACCCAACCACTTCTCGCCT AACAGTCTATATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGTGAGCTAAACA GTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAGATGGGCTACA TTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTGTTCGAAGGAGGATTTAGCAG TAAGATAAGAATAAAATACTTAACTGAACATAACGCAATGAAGTGCGCACACACCGCCCG TAC 2017-08-16 06:21:20.118 UTC MSA_Result0PIM_values0MSA_SimScore0Suitable_Algorithm0GapsTrimmed_MSA_Blocks0MSA_Clustal_Omega_for_MSA_Blockssequence0stype0output00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMSA_Clustal_Omega_for_PIMstype0sequence0output00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeseq_typevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity dna net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMSA_SimScore_EstimationpimDirectData0Suitable_Algorithm00MSA_SimScore00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMSAGapsTrimingMSA_Result_Phylip0GapsTrimmed_MSAResult00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMSA_Clustal_Omega_for_MSA_BlockssequenceA_Set_of_Seqs_FastaMSA_Clustal_Omega_for_MSA_Blocksstypeseq_typevalueMSA_Clustal_Omega_for_PIMstypeseq_typevalueMSA_Clustal_Omega_for_PIMsequenceA_Set_of_Seqs_FastaMSA_SimScore_EstimationpimDirectDataMSA_Clustal_Omega_for_PIMoutputMSAGapsTrimingMSA_Result_PhylipMSA_Clustal_Omega_for_MSA_BlocksoutputMSA_ResultMSA_Clustal_Omega_for_MSA_BlocksoutputPIM_valuesMSA_Clustal_Omega_for_PIMoutputMSA_SimScoreMSA_SimScore_EstimationMSA_SimScoreSuitable_AlgorithmMSA_SimScore_EstimationSuitable_AlgorithmGapsTrimmed_MSA_BlocksMSAGapsTrimingGapsTrimmed_MSAResult 44b2caf5-e952-4f66-a7c4-3ba06ca46142 2016-03-30 17:57:55.899 UTC 8003e7c3-1c35-4d10-b7f0-290b7ede41c7 2017-08-16 08:35:35.241 UTC ba2cf7ae-dddc-4889-9bdb-f4c12002b778 2017-08-16 08:45:20.292 UTC 0961784a-82b9-4cb2-b6a6-5e317d7ccc91 2017-08-16 06:21:21.886 UTC 29899649-897b-40ac-9792-173fb61aa8a3 2015-10-26 16:55:46.660 UTC 31b8ae17-7807-4b39-9bf7-f524d817e690 2016-03-30 17:50:22.304 UTC 1fdf799f-df83-4d78-8b13-d4ced272cde0 2017-08-16 08:34:28.660 UTC 05a9656e-a0b1-4092-bc0f-68400354295f 2016-02-18 20:40:14.648 UTC a958b887-dd47-41b8-b3f7-a95e4f8031f8 2016-03-25 10:59:22.337 UTC Workflow13MSA_Result_Phylip00 4 439 Tk1 ----------TCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAAC Tk2 TAAAAAGGCTTCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAAC Tk3x TAAAAAGGCTTCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAAC Tk4x ----------TCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAAC ACACAATCAAACCACGAATTGTTCGCCAAACAACTACGAGTAATACTTAA ACACAATCAAACCACGAATTGTTCGCCAAACAACTACGAGTAATACTTAA ACACAATCAAACCACGAATTGTTCGCCAAACAACTACGAGTAATACTTAA ACACAATCAAACCACGAATTGTTCGCCAAACAACTACGAGTAATACTTAA AACTTAAAAGACTTGACGGTACTTCACCCCAGCCTAGAGGAGCCTGTCCA AACTTAAAAGACTTGACGGTACTTCACCCCAGCCTAGAGGAGCCTGTCCA AACTTAAAAGACTTGACGGTACTTCACCCCAGCCTAGAGGAGCCTGTCCA AACTTAAAAGACTTGACGGTACTTCACCCCAGCCTAGAGGAGCCTGTCCA ATAACCGACAATCCACGATTAACCCAACCACTTCTCGCCTAACAGTCTAT ATAACCGACAATCCACGATTAACCCAACCACTTCTCGCCTAACAGTCTAT ATAACCGACAATCCACGATTAACCCAACCACTTCTCGCCTAACAGTCTAT ATAACCGACAATCCACGATTAACCCAACCACTTCTCGCCTAACAGTCTAT ATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGTGAGCTAAACA ATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGTGAGCTAAACA ATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGTGAGCTAAACA ATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGTGAGCTAAACA GTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAG GTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAG GTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAG GTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAG ATGGGCTACATTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTG ATGGGCTACATTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTG ATGGGCTACATTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTG ATGGGCTACATTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTG TTCGAAGGAGGATTTAGCAGTAAGATAAGAATAAAATACTTAACTGAACA TTCGAAGGAGGATTTAGCAGTAAGATAAGAATAAAATACTTAACTGAACA TTCGAAGGAGGATTTAGCAGTAAGATAAGAATAAAATACTTAACTGAACA TTCGAAGGAGGATTTAGCAGTAAGATAAGAATAAAATACTTAACTGAACA TAACGCAATGAAGTGCGCACACACCGCCCGTCACCCTTG TAACGCAATGAAGTGCGCACACACCGCCCGTCACCCTTG TAACGCAATGAAGtGCGCACACACCGCCCGTCACCC--- TAACGCAATGAAGTGCGCACACACCGCCCGTAC------ 2017-08-16 08:44:30.303 UTC GapsTrimmed_MSAResult0gapsTrimmingparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity http://bioservices.sci.psu.ac.th/axis2/services/MSAGapsTrimming?wsdl gapsTrimming net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegapsTrimming_inputargs00output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity args0 0 'text/plain' false output 0 'text/xml' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="gapsTrimming" name="parameters" qname="{http://msa}gapsTrimming"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="args0" qname="{http://msa}>gapsTrimming>args0" /></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegapsTrimming_outputinput0return00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity input 0 'text/xml' java.lang.String false return 0 'text/plain' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="gapsTrimmingResponse" name="parameters" qname="{http://msa}gapsTrimmingResponse"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="return" qname="{http://msa}>gapsTrimmingResponse>return" /></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegapsTrimmingparametersgapsTrimming_inputoutputgapsTrimming_inputargs0MSA_Result_PhylipgapsTrimming_outputinputgapsTrimmingparametersGapsTrimmed_MSAResultgapsTrimming_outputreturn bb7ffcaf-89f4-4e57-95c1-6604dbcacb03 2015-11-16 19:41:54.527 UTC f79394fb-643c-4f06-a315-2d3478b885ff 2016-02-18 20:27:32.385 UTC ae1be53b-0f2c-4025-97d7-ead98796faa4 2016-02-18 20:39:07.282 UTC 328ce22b-6df1-41f2-852e-7e6427a8b950 2017-08-16 08:44:32.256 UTC b573a110-89ef-4d9b-834a-c37455cf8f04 2015-11-16 19:39:50.236 UTC Workflow7sequence00 >Tk1x TCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAACACACAATCAAACCACGAATT GTTCGCCAAACAACTACGAGTAATACTTAAAACTTAAAAGACTTGACGGTACTTCACCCC AGCCTAGAGGAGCCTGTCCAATAACCGACAATCCACGATTAACCCAACCACTTCTCGCCT AACAGTCTATATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGTGAGCTAAACA GTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAGATGGGCTACA TTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTGTTCGAAGGAGGATTTAGCAG TAAGATAAGAATAAAATACTTAACTGAACATAACGCAATGAAGTGCGCACACACCGCCCG TCACCCTTG >Tk2x TAAAAAGGCTTCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAACACACAATCAA ACCACGAATTGTTCGCCAAACAACTACGAGTAATACTTAAAACTTAAAAGACTTGACGGT ACTTCACCCCAGCCTAGAGGAGCCTGTCCAATAACCGACAATCCACGATTAACCCAACCA CTTCTCGCCTAACAGTCTATATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGT GAGCTAAACAGTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAG ATGGGCTACATTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTGTTCGAAGGAG GATTTAGCAGTAAGATAAGAATAAAATACTTAACTGAACATAACGCAATGAAGTGCGCAC ACACCGCCCGTCACCCTTG >Tk3x TAAAAAGGCTTCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAACACACAATCAA ACCACGAATTGTTCGCCAAACAACTACGAGTAATACTTAAAACTTAAAAGACTTGACGGT ACTTCACCCCAGCCTAGAGGAGCCTGTCCAATAACCGACAATCCACGATTAACCCAACCA CTTCTCGCCTAACAGTCTATATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGT GAGCTAAACAGTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAG ATGGGCTACATTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTGTTCGAAGGAG GATTTAGCAGTAAGATAAGAATAAAATACTTAACTGAACATAACGCAATGAAGtGCGCAC ACACCGCCCGTCACCC >Tk4x TCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAACACACAATCAAACCACGAATT GTTCGCCAAACAACTACGAGTAATACTTAAAACTTAAAAGACTTGACGGTACTTCACCCC AGCCTAGAGGAGCCTGTCCAATAACCGACAATCCACGATTAACCCAACCACTTCTCGCCT AACAGTCTATATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGTGAGCTAAACA GTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAGATGGGCTACA TTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTGTTCGAAGGAGGATTTAGCAG TAAGATAAGAATAAAATACTTAACTGAACATAACGCAATGAAGTGCGCACACACCGCCCG TAC 2017-08-16 08:35:04.553 UTC stype00 protein dna rna 2015-10-11 08:46:10.838 UTC dna 2017-08-16 08:35:17.702 UTC jobId0status0output0run_ebi_clustalOparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity http://www.ebi.ac.uk/Tools/services/soap/clustalo?wsdl run net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResultparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity http://www.ebi.ac.uk/Tools/services/soap/clustalo?wsdl getResult net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_ebi_clustalO_inputparameters0email0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity email 0 'text/plain' false title 0 'text/plain' false parameters 0 'text/xml' false output 0 'text/xml' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="run" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}run"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="email" qname=">run>email"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>User email address</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="title" qname=">run>title"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>A title to identify the analysis job</xsd:documentation></xsd:annotation></s:basetype><s:complextype optional="false" unbounded="false" typename="InputParameters" name="parameters" qname=">run>parameters"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The list of parameters to be used for launching the analysis</xsd:documentation></xsd:annotation><s:elements><s:basetype optional="true" unbounded="false" typename="boolean" name="guidetreeout" qname="InputParameters>guidetreeout"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output guide tree [Output guide tree.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="dismatout" qname="InputParameters>dismatout"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output distance matrix [Output distance matrix. This is only calculated if the mBed-like clustering guide tree is set to false.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="dealign" qname="InputParameters>dealign"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Dealign input sequences [Remove any existing alignment (gaps) from input sequences.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="mbed" qname="InputParameters>mbed"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>mBed-like clustering guide tree [This option uses a sample of the input sequences and then represents all sequences as vectors to these sequences, enabling much more rapid generation of the guide tree, especially when the number of sequences is large.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="mbediteration" qname="InputParameters>mbediteration"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>mBed-like clustering iteration [Use mBed-like clustering during subsequent iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="iterations" qname="InputParameters>iterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Number of iterations [Number of (combined guide-tree/HMM) iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="gtiterations" qname="InputParameters>gtiterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Maximum guide tree iterations [Having set the number of combined iterations, this parameter can be changed to limit the number of guide tree iterations within the combined iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="hmmiterations" qname="InputParameters>hmmiterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Maximum HMM iterations [Having set the number of combined iterations, this parameter can be changed to limit the number of HMM iterations within the combined iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="outfmt" qname="InputParameters>outfmt"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output alignment format [Format for generated multiple sequence alignment.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="order" qname="InputParameters>order"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output order [The order in which the sequences appear in the final alignment]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="stype" qname="InputParameters>stype"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence Type [Defines the type of the sequences to be aligned]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="sequence" qname="InputParameters>sequence"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence [Three or more sequences to be aligned can be entered directly into this box. Sequences can be be in GCG, FASTA, EMBL, GenBank, PIR, NBRF, PHYLIP or UniProtKB/Swiss-Prot format. Partially formatted sequences are not accepted. Adding a return to the end of the sequence may help certain applications understand the input. Note that directly using data from word processors may yield unpredictable results as hidden/control characters may be present. There is currently a limit of 2000 sequences and 2MB of data.]</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeclustalO_inputsequence0stype0outfmt0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity guidetreeout 0 'text/plain' false dismatout 0 'text/plain' false dealign 0 'text/plain' false mbed 0 'text/plain' false mbediteration 0 'text/plain' false iterations 0 'text/plain' false gtiterations 0 'text/plain' false hmmiterations 0 'text/plain' false outfmt 0 'text/plain' false order 0 'text/plain' false stype 0 'text/plain' false sequence 0 'text/plain' false output 0 'text/xml' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="InputParameters" name="parameters" qname=">run>parameters"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The list of parameters to be used for launching the analysis</xsd:documentation></xsd:annotation><s:elements><s:basetype optional="true" unbounded="false" typename="boolean" name="guidetreeout" qname="InputParameters>guidetreeout"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output guide tree [Output guide tree.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="dismatout" qname="InputParameters>dismatout"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output distance matrix [Output distance matrix. This is only calculated if the mBed-like clustering guide tree is set to false.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="dealign" qname="InputParameters>dealign"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Dealign input sequences [Remove any existing alignment (gaps) from input sequences.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="mbed" qname="InputParameters>mbed"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>mBed-like clustering guide tree [This option uses a sample of the input sequences and then represents all sequences as vectors to these sequences, enabling much more rapid generation of the guide tree, especially when the number of sequences is large.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="mbediteration" qname="InputParameters>mbediteration"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>mBed-like clustering iteration [Use mBed-like clustering during subsequent iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="iterations" qname="InputParameters>iterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Number of iterations [Number of (combined guide-tree/HMM) iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="gtiterations" qname="InputParameters>gtiterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Maximum guide tree iterations [Having set the number of combined iterations, this parameter can be changed to limit the number of guide tree iterations within the combined iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="hmmiterations" qname="InputParameters>hmmiterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Maximum HMM iterations [Having set the number of combined iterations, this parameter can be changed to limit the number of HMM iterations within the combined iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="outfmt" qname="InputParameters>outfmt"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output alignment format [Format for generated multiple sequence alignment.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="order" qname="InputParameters>order"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output order [The order in which the sequences appear in the final alignment]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="stype" qname="InputParameters>stype"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence Type [Defines the type of the sequences to be aligned]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="sequence" qname="InputParameters>sequence"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence [Three or more sequences to be aligned can be entered directly into this box. Sequences can be be in GCG, FASTA, EMBL, GenBank, PIR, NBRF, PHYLIP or UniProtKB/Swiss-Prot format. Partially formatted sequences are not accepted. Adding a return to the end of the sequence may help certain applications understand the input. Note that directly using data from word processors may yield unpredictable results as hidden/control characters may be present. There is currently a limit of 2000 sequences and 2MB of data.]</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeemail_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity kasikrit@gmail.com net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeoutfmt_phylipvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity phylip net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_ebi_clustalO_outputinput0jobId00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity input 0 'text/xml' java.lang.String false jobId 0 'text/plain' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="runResponse" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}runResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname=">runResponse>jobId"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>A unique identifier for the analysis job</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResult_inputjobId0type0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity jobId 0 'text/plain' false type 0 'text/plain' false parameters 1 'text/xml' false output 0 'text/xml' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResult" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}getResult"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname=">getResult>jobId"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>An identifier for the job to check</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="false" unbounded="false" typename="string" name="type" qname=">getResult>type"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The renderer to be used to format the output</xsd:documentation></xsd:annotation></s:basetype><s:arraytype optional="true" unbounded="false" wrapped="false" typename="wsRawOutputParameters" name="parameters" qname=">getResult>parameters"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>A list of parameters to be passed on to the renderer</xsd:documentation></xsd:annotation><s:elementtype><s:complextype optional="false" unbounded="false" typename="wsRawOutputParameter" name="" qname="{http://soap.jdispatcher.ebi.ac.uk}wsRawOutputParameter"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="wsRawOutputParameter>name"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The name of the parameter</xsd:documentation></xsd:annotation></s:basetype><s:arraytype optional="false" unbounded="false" wrapped="true" typename="ArrayOfString" name="value" qname="wsRawOutputParameter>value"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The parameter value as an array of String</xsd:documentation></xsd:annotation><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:elementtype></s:arraytype></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResult_outputinput0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity input 0 'text/xml' java.lang.String false output 0 'application/octet-stream' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResultResponse" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}getResultResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="base64Binary" name="output" qname=">getResultResponse>output"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Base64 encoded data corresponding to the output of the job formatted by the renderer</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokenestedjobId0status00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop <activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.5</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns=""> <inputs> <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> <name>status</name> <depth>0</depth> <translatedElementType>java.lang.String</translatedElementType> <allowsLiteralValues>true</allowsLiteralValues> </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> </inputs> <outputs> <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> <name>loop</name> <depth>0</depth> <granularDepth>0</granularDepth> </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> </outputs> <classLoaderSharing>workflow</classLoaderSharing> <localDependencies /> <artifactDependencies /> <script>loop = "" + status.matches(".*RUNNING.*"); if ("true".matches(loop)) { Thread.sleep(2000); }</script> <dependencies /> </net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity> true net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketype_aln_phylipvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity aln-phylip net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_ebi_clustalOparametersrun_ebi_clustalO_inputoutputgetResultparametersgetResult_inputoutputrun_ebi_clustalO_inputparametersclustalO_inputoutputrun_ebi_clustalO_inputemailemail_valuevalueclustalO_inputsequencesequenceclustalO_inputstypestypeclustalO_inputoutfmtoutfmt_phylipvaluerun_ebi_clustalO_outputinputrun_ebi_clustalOparametersgetResult_inputjobIdrun_ebi_clustalO_outputjobIdgetResult_inputtypetype_aln_phylipvaluegetResult_outputinputgetResultparametersnestedjobIdrun_ebi_clustalO_outputjobIdjobIdrun_ebi_clustalO_outputjobIdstatusnestedstatusoutputgetResult_outputoutput 5a5d0467-244c-4761-91d7-100afebe6a4a 2015-10-26 16:40:56.701 UTC 85ed5936-381c-4b39-b6a3-8b3ed295d205 2015-10-11 09:08:07.998 UTC 22984cf0-bc7b-4723-b94c-3f0ad74cd6cd 2015-10-11 09:05:29.774 UTC d16660e9-7b1d-4266-9f59-8a746b674dde 2015-10-11 09:07:13.347 UTC 4b6d28ef-2619-45b8-947a-f14ad6c3e710 2015-10-11 08:57:17.246 UTC f8c3ed4c-363f-42d9-9309-2ac5bd1cc2ce 2015-10-11 08:55:31.309 UTC 70e81c65-f0e5-4319-a292-53d096f68a80 2017-08-16 08:35:20.322 UTC 0f5be853-39f8-47c2-8895-b6ea48b6adab 2015-10-11 10:46:08.157 UTC 7bdfffb0-1012-4059-8e6b-957d2714db9d 2015-10-11 08:58:35.396 UTC fbc24586-97cf-471a-b011-f164cdbee929 2015-10-11 10:43:04.473 UTC c63c9a44-c024-42c7-b9d5-d30ab7ba973c 2015-10-11 10:46:50.240 UTC Workflow7sequence00 >Tk1x TCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAACACACAATCAAACCACGAATT GTTCGCCAAACAACTACGAGTAATACTTAAAACTTAAAAGACTTGACGGTACTTCACCCC AGCCTAGAGGAGCCTGTCCAATAACCGACAATCCACGATTAACCCAACCACTTCTCGCCT AACAGTCTATATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGTGAGCTAAACA GTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAGATGGGCTACA TTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTGTTCGAAGGAGGATTTAGCAG TAAGATAAGAATAAAATACTTAACTGAACATAACGCAATGAAGTGCGCACACACCGCCCG TCACCCTTG >Tk2x TAAAAAGGCTTCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAACACACAATCAA ACCACGAATTGTTCGCCAAACAACTACGAGTAATACTTAAAACTTAAAAGACTTGACGGT ACTTCACCCCAGCCTAGAGGAGCCTGTCCAATAACCGACAATCCACGATTAACCCAACCA CTTCTCGCCTAACAGTCTATATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGT GAGCTAAACAGTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAG ATGGGCTACATTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTGTTCGAAGGAG GATTTAGCAGTAAGATAAGAATAAAATACTTAACTGAACATAACGCAATGAAGTGCGCAC ACACCGCCCGTCACCCTTG >Tk3x TAAAAAGGCTTCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAACACACAATCAA ACCACGAATTGTTCGCCAAACAACTACGAGTAATACTTAAAACTTAAAAGACTTGACGGT ACTTCACCCCAGCCTAGAGGAGCCTGTCCAATAACCGACAATCCACGATTAACCCAACCA CTTCTCGCCTAACAGTCTATATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGT GAGCTAAACAGTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAG ATGGGCTACATTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTGTTCGAAGGAG GATTTAGCAGTAAGATAAGAATAAAATACTTAACTGAACATAACGCAATGAAGtGCGCAC ACACCGCCCGTCACCC >Tk4x TCAAACTGGGATTAGATACCCCACTATGCCTAGCCATAACACACAATCAAACCACGAATT GTTCGCCAAACAACTACGAGTAATACTTAAAACTTAAAAGACTTGACGGTACTTCACCCC AGCCTAGAGGAGCCTGTCCAATAACCGACAATCCACGATTAACCCAACCACTTCTCGCCT AACAGTCTATATACCGCCGTCGCCAGCTTACCTTGTAAAAGAAATAAAGTGAGCTAAACA GTAACACACTAAAACGACAGGTCGAGGTGTAACTCATGAAGTGGACCAAGATGGGCTACA TTCTCCAACAGAGCACACGAACAACACTATGAAATTAGTGTTCGAAGGAGGATTTAGCAG TAAGATAAGAATAAAATACTTAACTGAACATAACGCAATGAAGTGCGCACACACCGCCCG TAC 2017-08-16 08:31:41.653 UTC stype00 dna 2017-08-16 08:31:51.815 UTC protein dna rna 2015-10-11 08:46:10.838 UTC jobId0status0output0run_ebi_clustalOparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity http://www.ebi.ac.uk/Tools/services/soap/clustalo?wsdl run net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResultparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity http://www.ebi.ac.uk/Tools/services/soap/clustalo?wsdl getResult net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_ebi_clustalO_inputparameters0email0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity email 0 'text/plain' false title 0 'text/plain' false parameters 0 'text/xml' false output 0 'text/xml' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="run" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}run"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="email" qname=">run>email"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>User email address</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="title" qname=">run>title"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>A title to identify the analysis job</xsd:documentation></xsd:annotation></s:basetype><s:complextype optional="false" unbounded="false" typename="InputParameters" name="parameters" qname=">run>parameters"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The list of parameters to be used for launching the analysis</xsd:documentation></xsd:annotation><s:elements><s:basetype optional="true" unbounded="false" typename="boolean" name="guidetreeout" qname="InputParameters>guidetreeout"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output guide tree [Output guide tree.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="dismatout" qname="InputParameters>dismatout"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output distance matrix [Output distance matrix. This is only calculated if the mBed-like clustering guide tree is set to false.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="dealign" qname="InputParameters>dealign"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Dealign input sequences [Remove any existing alignment (gaps) from input sequences.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="mbed" qname="InputParameters>mbed"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>mBed-like clustering guide tree [This option uses a sample of the input sequences and then represents all sequences as vectors to these sequences, enabling much more rapid generation of the guide tree, especially when the number of sequences is large.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="mbediteration" qname="InputParameters>mbediteration"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>mBed-like clustering iteration [Use mBed-like clustering during subsequent iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="iterations" qname="InputParameters>iterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Number of iterations [Number of (combined guide-tree/HMM) iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="gtiterations" qname="InputParameters>gtiterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Maximum guide tree iterations [Having set the number of combined iterations, this parameter can be changed to limit the number of guide tree iterations within the combined iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="hmmiterations" qname="InputParameters>hmmiterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Maximum HMM iterations [Having set the number of combined iterations, this parameter can be changed to limit the number of HMM iterations within the combined iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="outfmt" qname="InputParameters>outfmt"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output alignment format [Format for generated multiple sequence alignment.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="order" qname="InputParameters>order"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output order [The order in which the sequences appear in the final alignment]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="stype" qname="InputParameters>stype"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence Type [Defines the type of the sequences to be aligned]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="sequence" qname="InputParameters>sequence"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence [Three or more sequences to be aligned can be entered directly into this box. Sequences can be be in GCG, FASTA, EMBL, GenBank, PIR, NBRF, PHYLIP or UniProtKB/Swiss-Prot format. Partially formatted sequences are not accepted. Adding a return to the end of the sequence may help certain applications understand the input. Note that directly using data from word processors may yield unpredictable results as hidden/control characters may be present. There is currently a limit of 2000 sequences and 2MB of data.]</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeclustalO_inputsequence0stype0outfmt0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity guidetreeout 0 'text/plain' false dismatout 0 'text/plain' false dealign 0 'text/plain' false mbed 0 'text/plain' false mbediteration 0 'text/plain' false iterations 0 'text/plain' false gtiterations 0 'text/plain' false hmmiterations 0 'text/plain' false outfmt 0 'text/plain' false order 0 'text/plain' false stype 0 'text/plain' false sequence 0 'text/plain' false output 0 'text/xml' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="InputParameters" name="parameters" qname=">run>parameters"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The list of parameters to be used for launching the analysis</xsd:documentation></xsd:annotation><s:elements><s:basetype optional="true" unbounded="false" typename="boolean" name="guidetreeout" qname="InputParameters>guidetreeout"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output guide tree [Output guide tree.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="dismatout" qname="InputParameters>dismatout"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output distance matrix [Output distance matrix. This is only calculated if the mBed-like clustering guide tree is set to false.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="dealign" qname="InputParameters>dealign"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Dealign input sequences [Remove any existing alignment (gaps) from input sequences.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="mbed" qname="InputParameters>mbed"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>mBed-like clustering guide tree [This option uses a sample of the input sequences and then represents all sequences as vectors to these sequences, enabling much more rapid generation of the guide tree, especially when the number of sequences is large.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="boolean" name="mbediteration" qname="InputParameters>mbediteration"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>mBed-like clustering iteration [Use mBed-like clustering during subsequent iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="iterations" qname="InputParameters>iterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Number of iterations [Number of (combined guide-tree/HMM) iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="gtiterations" qname="InputParameters>gtiterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Maximum guide tree iterations [Having set the number of combined iterations, this parameter can be changed to limit the number of guide tree iterations within the combined iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="int" name="hmmiterations" qname="InputParameters>hmmiterations"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Maximum HMM iterations [Having set the number of combined iterations, this parameter can be changed to limit the number of HMM iterations within the combined iterations.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="outfmt" qname="InputParameters>outfmt"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output alignment format [Format for generated multiple sequence alignment.]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="order" qname="InputParameters>order"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Output order [The order in which the sequences appear in the final alignment]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="stype" qname="InputParameters>stype"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence Type [Defines the type of the sequences to be aligned]</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="true" unbounded="false" typename="string" name="sequence" qname="InputParameters>sequence"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Sequence [Three or more sequences to be aligned can be entered directly into this box. Sequences can be be in GCG, FASTA, EMBL, GenBank, PIR, NBRF, PHYLIP or UniProtKB/Swiss-Prot format. Partially formatted sequences are not accepted. Adding a return to the end of the sequence may help certain applications understand the input. Note that directly using data from word processors may yield unpredictable results as hidden/control characters may be present. There is currently a limit of 2000 sequences and 2MB of data.]</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeemail_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity kasikrit@gmail.com net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclustal_numvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity clustal_num net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_ebi_clustalO_outputinput0jobId00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity input 0 'text/xml' java.lang.String false jobId 0 'text/plain' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="runResponse" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}runResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname=">runResponse>jobId"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>A unique identifier for the analysis job</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResult_inputjobId0type0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity jobId 0 'text/plain' false type 0 'text/plain' false parameters 1 'text/xml' false output 0 'text/xml' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResult" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}getResult"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname=">getResult>jobId"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>An identifier for the job to check</xsd:documentation></xsd:annotation></s:basetype><s:basetype optional="false" unbounded="false" typename="string" name="type" qname=">getResult>type"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The renderer to be used to format the output</xsd:documentation></xsd:annotation></s:basetype><s:arraytype optional="true" unbounded="false" wrapped="false" typename="wsRawOutputParameters" name="parameters" qname=">getResult>parameters"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>A list of parameters to be passed on to the renderer</xsd:documentation></xsd:annotation><s:elementtype><s:complextype optional="false" unbounded="false" typename="wsRawOutputParameter" name="" qname="{http://soap.jdispatcher.ebi.ac.uk}wsRawOutputParameter"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="name" qname="wsRawOutputParameter>name"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The name of the parameter</xsd:documentation></xsd:annotation></s:basetype><s:arraytype optional="false" unbounded="false" wrapped="true" typename="ArrayOfString" name="value" qname="wsRawOutputParameter>value"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The parameter value as an array of String</xsd:documentation></xsd:annotation><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:elementtype></s:arraytype></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResult_outputinput0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity input 0 'text/xml' java.lang.String false output 0 'application/octet-stream' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getResultResponse" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}getResultResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="base64Binary" name="output" qname=">getResultResponse>output"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>Base64 encoded data corresponding to the output of the job formatted by the renderer</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokenestedjobId0status00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop <activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.5</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns=""> <inputs> <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> <name>status</name> <depth>0</depth> <translatedElementType>java.lang.String</translatedElementType> <allowsLiteralValues>true</allowsLiteralValues> </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> </inputs> <outputs> <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> <name>loop</name> <depth>0</depth> <granularDepth>0</granularDepth> </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> </outputs> <classLoaderSharing>workflow</classLoaderSharing> <localDependencies /> <artifactDependencies /> <script>loop = "" + status.matches(".*RUNNING.*"); if ("true".matches(loop)) { Thread.sleep(2000); }</script> <dependencies /> </net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity> true net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketype_pimvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity pim net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_ebi_clustalOparametersrun_ebi_clustalO_inputoutputgetResultparametersgetResult_inputoutputrun_ebi_clustalO_inputparametersclustalO_inputoutputrun_ebi_clustalO_inputemailemail_valuevalueclustalO_inputsequencesequenceclustalO_inputstypestypeclustalO_inputoutfmtclustal_numvaluerun_ebi_clustalO_outputinputrun_ebi_clustalOparametersgetResult_inputjobIdrun_ebi_clustalO_outputjobIdgetResult_inputtypetype_pimvaluegetResult_outputinputgetResultparametersnestedjobIdrun_ebi_clustalO_outputjobIdjobIdrun_ebi_clustalO_outputjobIdstatusnestedstatusoutputgetResult_outputoutput f8c3ed4c-363f-42d9-9309-2ac5bd1cc2ce 2015-10-11 08:55:31.309 UTC fbc24586-97cf-471a-b011-f164cdbee929 2015-10-11 10:43:04.473 UTC 22984cf0-bc7b-4723-b94c-3f0ad74cd6cd 2015-10-11 09:05:29.774 UTC 0f5be853-39f8-47c2-8895-b6ea48b6adab 2015-10-11 10:46:08.157 UTC 4b6d28ef-2619-45b8-947a-f14ad6c3e710 2015-10-11 08:57:17.246 UTC 69914d41-2bd1-4699-b3ef-cd2a82aa031c 2015-10-17 12:40:56.616 UTC 85ed5936-381c-4b39-b6a3-8b3ed295d205 2015-10-11 09:08:07.998 UTC 0055fa36-bc7b-443b-89ec-3b84fd5f8429 2015-10-17 13:09:58.716 UTC d16660e9-7b1d-4266-9f59-8a746b674dde 2015-10-11 09:07:13.347 UTC c63c9a44-c024-42c7-b9d5-d30ab7ba973c 2015-10-11 10:46:50.240 UTC 9ebbf76f-5a40-4603-b9ef-c270803123cf 2017-08-16 08:31:53.951 UTC 7bdfffb0-1012-4059-8e6b-957d2714db9d 2015-10-11 08:58:35.396 UTC Workflow1pimDirectData00 # # # Percent Identity Matrix - created by Clustal2.1 # # 1: JN697058 100.00 67.94 67.66 67.73 67.66 67.66 67.66 67.66 67.66 67.66 67.66 67.66 67.66 2: KF744401 67.94 100.00 92.17 92.15 92.17 92.17 92.17 92.17 92.17 92.17 92.17 92.17 92.17 3: KF744397 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 4: KF744398 67.73 92.15 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 5: KF744399 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 6: KF744400 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 7: KF744402 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 8: KF744403 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 9: KF744404 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 10: KF744405 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 11: KF744406 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 12: KF744407 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 13: KF744408 67.66 92.17 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 2015-10-25 18:49:47.571 UTC MSA_SimScore0Suitable_Algorithm0BeanshellsimScore0algorithm00net.sf.taverna.t2.activitiesbeanshell-activity1.5net.sf.taverna.t2.activities.beanshell.BeanshellActivity simScore 0 text/plain java.lang.String true algorithm 0 0 workflow net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecalSimilarityScore_AXIS2parameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity http://bioservices.sci.psu.ac.th/axis2/services/MSASimilarityEstimation?wsdl calSimilarityScore net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecalSimilarityScore_AXIS2_inputargs00output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity args0 0 'text/plain' false output 0 'text/xml' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="calSimilarityScore" name="parameters" qname="{http://similarity.msa}calSimilarityScore"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="args0" qname="{http://similarity.msa}>calSimilarityScore>args0" /></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecalSimilarityScore_AXIS2_outputinput0return00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity input 0 'text/xml' java.lang.String false return 0 'text/plain' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="calSimilarityScoreResponse" name="parameters" qname="{http://similarity.msa}calSimilarityScoreResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="double" name="return" qname="{http://similarity.msa}>calSimilarityScoreResponse>return" /></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeBeanshellsimScorecalSimilarityScore_AXIS2_outputreturncalSimilarityScore_AXIS2parameterscalSimilarityScore_AXIS2_inputoutputcalSimilarityScore_AXIS2_inputargs0pimDirectDatacalSimilarityScore_AXIS2_outputinputcalSimilarityScore_AXIS2parametersMSA_SimScorecalSimilarityScore_AXIS2_outputreturnSuitable_AlgorithmBeanshellalgorithm 2c77ac78-97bf-48ef-9493-5a818d530fde 2015-10-25 19:14:55.775 UTC 62697098-c92f-4fe3-b5f3-01d09ce685a5 2015-10-25 19:03:14.81 UTC add90e00-d97e-4340-a504-e874ff836d55 2015-10-25 19:27:20.2 UTC c7a35313-a57d-460b-b134-79d34430af0e 2015-10-25 19:24:40.801 UTC 98e18c06-5ad1-47dd-81f0-6b72b0347139 2015-10-25 18:54:09.625 UTC 546146f9-d0a4-4762-9a20-519049bfde93 2016-02-18 20:18:43.444 UTC 8e6fb7e0-b0e5-465b-a8f1-58f8597922b3 2015-10-25 18:49:48.924 UTC 9fe5ee5e-e9b2-4fe6-92cc-4e2fff8b3cae 2015-10-25 19:18:24.873 UTC 45a5bf50-1ff3-4eee-a275-59f4635b050d 2015-11-16 16:34:35.107 UTC a52295f1-3684-43b6-b36d-3d764e00e3f5 2015-10-25 19:17:09.72 UTC 47333da1-a3f3-47e4-8298-ef9f20c1d02f 2015-10-25 19:14:28.491 UTC 9cce5295-5f15-40db-bee5-2adf14e2ebed 2015-10-25 18:59:05.397 UTC e780064f-f588-44c6-a21b-3b78c681c9a9 2016-02-18 20:33:33.806 UTC f0a6910b-8207-4429-b357-81247edef61b 2016-02-18 20:19:36.456 UTC ccb1e039-8baf-444e-890a-4da8d461ae25 2015-10-25 19:22:46.792 UTC 15372ff4-1007-4606-bbf8-f941582dbbce 2015-10-25 19:28:31.663 UTC 08b3a7ac-8bd2-4625-a582-5a21fac67998 2015-10-25 18:49:29.706 UTC ec036e9d-847a-4067-9cdb-4bdfd6b405c0 2015-10-25 19:07:10.92 UTC 15d4bd92-0a81-416c-8e63-5669d5ef03f9 2015-10-26 16:49:57.473 UTC f4fe6d02-5b4e-40c6-9ee2-7fdede751c97 2015-10-25 19:15:44.377 UTC 9eafc07e-e4bb-4bbc-9a2f-67fb8c6dc445 2015-10-25 19:05:47.313 UTC nestedjobId00status0getStatusparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity http://www.ebi.ac.uk/Tools/services/soap/clustalo?wsdl getStatus net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_inputjobId0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity jobId 0 'text/plain' false output 0 'text/xml' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatus" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}getStatus"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="jobId" qname=">getStatus>jobId"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>An identifier for the job to check</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatus_outputinput0status00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity input 0 'text/xml' java.lang.String false status 0 'text/plain' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getStatusResponse" name="parameters" qname="{http://soap.jdispatcher.ebi.ac.uk}getStatusResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="status" qname=">getStatusResponse>status"><xsd:annotation xmlns:xsd="http://www.w3.org/2001/XMLSchema"><xsd:documentation>The status of the job (FINISHED, ERROR, RUNNING, NOT_FOUND or FAILURE)</xsd:documentation></xsd:annotation></s:basetype></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetStatusparametersgetStatus_inputoutputgetStatus_inputjobIdjobIdgetStatus_outputinputgetStatusparametersstatusgetStatus_outputstatus 97aef5cb-8c53-45bd-97b4-a3cbfb5d09fb 2015-10-11 08:55:31.536 UTC nested 2015-10-11 08:52:41.282 UTC