Get targets for compound

None

/result/items/item/hasAssay/hasTarget/@href
/result/items/item/hasAssay/hasTarget/type/@href
filteredtargets = new ArrayList();

typelistlen = types.size();
urilistlen = uris.size();

int m = Math.min(uris.size(), types.size());

for (int i = 0; i < m; i++) {
	String uri = uris.get(i);
	String type = types.get(i);
	
	if (type.contains("SingleProtein")) {
		filteredtargets.add(uri);
	}
}
flatten(inputs, outputs, depth) {
	for (i = inputs.iterator(); i.hasNext();) {
	    element = i.next();
		if (element instanceof Collection && depth > 0) {
			flatten(element, outputs, depth - 1);
		} else {
			outputs.add(element);
		}
	}
}

outputlist = new ArrayList();

flatten(inputlist, outputlist, 1);
List strippedlist = new ArrayList();
for (Iterator i = stringlist.iterator(); i.hasNext();) {
	String item = (String) i.next();
	if (strippedlist.contains(item) == false) {
		strippedlist.add(item);
	}
}

Name	Type	Description
CompoundPharmacologyList	rest	Retrieves list of pharmacological targets from Open PHACTS.
list_of_target_URIs	xpath	The XPath service provides fast processing of XML data. Xpath Expression /result/items/item/hasAssay/hasTarget/@href
list_of_target_types	xpath	The XPath service provides fast processing of XML data. Xpath Expression /result/items/item/hasAssay/hasTarget/type/@href
filter_for_Single_Proteins	beanshell	Beanshell_to_remove_every_type_and_corresponding_URI_but_SingleProteins Script filteredtargets = new ArrayList(); typelistlen = types.size(); urilistlen = uris.size(); int m = Math.min(uris.size(), types.size()); for (int i = 0; i < m; i++) { String uri = uris.get(i); String type = types.get(i); if (type.contains("SingleProtein")) { filteredtargets.add(uri); } }
Flatten_List	localworker	Script flatten(inputs, outputs, depth) { for (i = inputs.iterator(); i.hasNext();) { element = i.next(); if (element instanceof Collection && depth > 0) { flatten(element, outputs, depth - 1); } else { outputs.add(element); } } } outputlist = new ArrayList(); flatten(inputlist, outputlist, 1);
Remove_String_Duplicates	localworker	Script List strippedlist = new ArrayList(); for (Iterator i = stringlist.iterator(); i.hasNext();) { String item = (String) i.next(); if (strippedlist.contains(item) == false) { strippedlist.add(item); } }

Source	Sink
compound_uri	CompoundPharmacologyList:id
CompoundPharmacologyList:responseBody	list_of_target_URIs:xml_text
CompoundPharmacologyList:responseBody	list_of_target_types:xml_text
list_of_target_URIs:nodelist	filter_for_Single_Proteins:uris
list_of_target_types:nodelist	filter_for_Single_Proteins:types
filter_for_Single_Proteins:filteredtargets	Flatten_List:inputlist
Flatten_List:outputlist	Remove_String_Duplicates:stringlist
Remove_String_Duplicates:strippedlist	target_list

Get targets for compound

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