Read SwissProt file

Created: 2008-09-27 17:17:24

Download Workflow

The Get_web_page_from_URL downloads a file from myExperiment that contains SwissProt data. That data is then saved to a temporary file generated by the create_and_populate_temporary_file beanshell. The path to the temporary file is then passed to the Read_SwissProt_file service. That service reads the file and converts the SwissProt data into Agave format. The result is then sent to the workflow's out port.

Preview

Download as scalable diagram (SVG)

Run

Run this Workflow in the Taverna Workbench...

Option 1:

Copy and paste this link into File > 'Open workflow location...'
http://www.myexperiment.org/workflows/451/download?version=1
[ More Info Expand ]

Workflow Components

Inputs (0)

Processors (3)

Name	Type	Description
Create_and_populate_temporary_file	beanshell
Get_web_page_from_URL	local
Read_SwissProt_file	local

Beanshells (1)

Name	Description	Inputs	Outputs
Create_and_populate_temporary_file		content	filePath

Outputs (1)

Name	Description
out

Links (3)

Source	Sink
Create_and_populate_temporary_file:filePath	Read_SwissProt_file:fileUrl
Get_web_page_from_URL:contents	Create_and_populate_temporary_file:content
Read_SwissProt_file:results	out