Get_HPO_concept_labebioportal_api_key00 Biportal api key to query bioportal sparql endpoint 2014-10-15 07:56:07.646 UTC 2014-10-15 12:33:10.680 UTC file_url00 Input file url 2014-10-15 12:33:35.73 UTC /home/rajaram/Downloads/htt-HPO-matching.xls 2014-10-15 11:47:07.676 UTC TSV0SpreadsheetImportfileurl0D11 Extract value from column D 2014-10-15 12:34:21.10 UTC net.sf.taverna.t2.activitiesspreadsheet-import-activity1.5net.sf.taverna.t2.activities.spreadsheet.SpreadsheetImportActivity 3 3 1 -1 true true true EMPTY_STRING PORT_PER_COLUMN , net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGetHPOConceptInfohpoURI0bioportal_api_key0row00net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_Stringstringlist1seperator0concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.5net.sf.taverna.t2.activities.localworker.LocalworkerActivity stringlist 1 l('text/plain') java.lang.String true seperator 0 'text/plain' java.lang.String true concatenated 0 'text/plain' 0 workflow org.embl.ebi.escience.scuflworkers.java.StringListMerge net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeseperator_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSpreadsheetImportfileurlfile_urlGetHPOConceptInfohpoURISpreadsheetImportDGetHPOConceptInfobioportal_api_keybioportal_api_keyMerge_String_List_to_a_StringstringlistGetHPOConceptInforowMerge_String_List_to_a_Stringseperatorseperator_valuevalueTSVMerge_String_List_to_a_Stringconcatenated 756b16ab-c43e-4852-a5e6-d24d8465ba3c 2014-10-14 15:34:32.646 UTC 1b4937dd-9f4f-4f15-8e2c-19af794b8be0 2014-04-17 15:59:21.62 UTC 2153da39-81d9-4251-9d62-3d8a7ef17bd9 2014-10-14 15:25:53.606 UTC 1a4b00cc-af6f-4fe0-bf39-affc19c40d89 2014-10-15 07:25:33.775 UTC ed86431b-1856-4d13-831b-6301e24c13d9 2014-10-15 12:22:53.640 UTC 20cb2dba-9474-4789-829c-7f96a8c3b100 2014-10-14 15:35:19.367 UTC ec310da8-8d14-4fd2-aad6-073a405442ea 2014-04-17 15:26:51.640 UTC Rajaram kaliyaperumal, Eelke van der horst, Marco roos 2014-10-15 12:37:42.895 UTC 9d661b19-2a55-437a-b64d-60a1a2c68ef0 2014-04-16 09:07:47.745 UTC d7f082c5-a939-4117-9559-36c721b92954 2013-06-28 05:10:23.983 UTC fb6c57e8-0fb6-49fe-807d-19fb6fd61682 2014-04-16 09:14:49.462 UTC 2052a725-82ba-4177-bbe2-54e8cff5b45c 2014-04-16 09:12:35.268 UTC b79dea9f-a7bb-4a42-9ebf-c8148a3baa88 2014-10-15 07:45:22.136 UTC 953358cc-aac8-4daa-a81d-4037d37f8536 2014-04-17 13:46:27.66 UTC 085064f9-fbfb-4ce9-893a-888b3fb2fa77 2014-04-16 14:15:47.970 UTC 2a420a22-54ec-4507-8a1c-ba8e4bfa9024 2014-10-15 12:17:22.319 UTC 61185ebd-5c45-463c-8d32-8c2168d0742c 2014-04-16 14:53:03.896 UTC 539f3d74-72bb-4a56-a82f-f24f0241a529 2014-04-16 09:02:36.483 UTC a3b14355-a20c-4a35-9d1c-40d7c2442c49 2014-10-15 07:53:01.332 UTC 1c534d9c-79f2-4813-9dec-e56afc03f29b 2014-04-16 08:57:22.159 UTC e964ef90-8c53-4416-9703-435d647b248a 2014-04-16 14:07:04.995 UTC ceaf108f-8bc1-4fc2-b54f-2ea3629909ac 2014-10-15 11:45:10.132 UTC e06c7ed3-519d-4f3c-a93d-848ca267a40d 2014-04-16 09:01:38.188 UTC 1e2adadb-884c-42d1-b4ca-a78f67a6e4de 2014-10-15 07:44:04.695 UTC 5c561912-d87d-4b58-9cd9-8b1e5ea3870e 2014-04-17 15:28:23.222 UTC 98dd2ae6-5e96-48dc-9b1f-47f1bbbb9390 2014-04-16 08:52:23.811 UTC 6382cf11-4c86-4022-aece-55c818a39995 2014-04-16 15:29:51.982 UTC bf09c80d-36f8-4aa2-8f18-173043f6375b 2014-04-16 15:09:14.317 UTC 964d22a5-68e3-4101-9033-8a55de28ff9a 2014-04-16 14:57:12.764 UTC e83ca357-6985-4221-9edf-e7fe9768ab78 2014-10-14 15:33:11.454 UTC 8ecbb29f-e0aa-47a9-8cc4-fad10dbd0a38 2014-10-15 11:46:13.615 UTC 2453b4eb-ad71-435d-9e7e-fde05f8fb29a 2014-10-20 12:30:49.679 UTC 57ac945f-fbfe-4e2a-acde-f83f4067b2d2 2014-04-16 14:38:22.770 UTC 3f48bc8d-e346-4b1b-b638-53e07ba478f4 2014-04-16 14:13:10.364 UTC 6691406d-b294-446c-95ca-137dc08c9789 2013-06-28 05:06:08.140 UTC 28012056-ffb8-43d4-a549-acb4a8d22508 2014-04-16 12:04:13.386 UTC ef52dfc5-64b5-4839-a651-9c3ac8f3af32 2014-04-16 09:11:58.19 UTC dbdb1aa1-b44b-4a7e-b02b-063e0ef0fc58 2014-04-16 15:18:28.24 UTC a3dab9e6-9db0-453d-9ec6-296bd0e6b0c2 2014-04-16 09:03:15.709 UTC 87e1535f-0469-4c8f-8820-0c8c261d5a14 2014-10-15 08:01:51.380 UTC 6d8dfe81-e5af-40fc-be66-ebdec3b61436 2014-04-16 14:45:39.756 UTC 90913f2c-4e82-4586-a3c4-41aefe31a747 2014-04-16 14:41:12.46 UTC 77b5cf48-6dc1-4378-8d10-ef2d77c5d69e 2014-04-16 09:07:08.104 UTC Get HPO concept label and synonym 2014-10-15 12:38:25.228 UTC 805ee308-a07c-4af3-87dd-8150d24abea2 2014-04-16 13:18:30.263 UTC 827e86f0-9a85-49ae-b85f-76c128ce6f4c 2014-04-16 13:17:12.946 UTC bfe19275-b298-4a4c-8fd8-8c5603fc0b7f 2014-04-16 09:21:23.805 UTC 4b7646fc-b541-47dc-8575-a0c2bd8b4f1b 2014-04-17 13:51:36.697 UTC bcd2067d-6455-45c8-bbf4-dfc63dc3e378 2014-04-16 09:15:41.25 UTC 4fe9896b-e25d-460c-bc97-21336ba5368d 2014-10-14 15:24:00.873 UTC e24f901a-973e-4356-9955-261f5427539b 2014-10-15 11:47:18.775 UTC ec503a31-578f-4f08-9ae8-72ffa80408d4 2014-04-16 15:25:27.147 UTC 277fbeb1-fee8-4850-90dc-59aa884fea37 2014-04-16 14:49:54.194 UTC 0cb3efb8-1ccb-4fc0-8c57-c59ec79ecf8b 2014-10-15 12:38:32.41 UTC 0a2ed783-c6bc-4eff-b2a9-5982b600951c 2014-04-16 14:44:19.437 UTC 0c809868-7d5f-455f-806a-61b960081a26 2014-10-15 07:32:21.147 UTC a4b157f4-369f-4c1b-bf28-3318f916a898 2014-04-16 14:19:22.430 UTC 7f45ae50-b9cd-49a0-bb45-8f6ebe4579b8 2014-10-15 07:29:20.345 UTC 32cca822-7634-4c2e-968f-07b5ada36974 2014-04-16 11:56:21.999 UTC a0e9e8ff-ff39-4c4b-9f8f-2a74efce6cc2 2014-10-15 07:41:45.650 UTC 357d9399-580c-4fa6-85ab-845817a5a0ba 2014-04-16 15:22:03.904 UTC 27368cc3-56b5-4fed-a32b-7ec9b87bea95 2014-10-14 15:30:26.144 UTC 941ff623-fcfb-428c-86a7-a58cbf99798f 2014-04-17 15:35:48.756 UTC e95acc7e-8b0a-40ab-aec0-d0eafced1024 2014-10-15 07:39:28.912 UTC Workflow1bioportal_api_key00 3a6ded3d-0768-4d32-9608-11fc205f37a2 2014-10-15 07:47:55.334 UTC Biportal api key to query bioportal sparql endpoint 2014-10-15 07:56:07.646 UTC hpoURI00row0REST_Service_LABELquery0apikey0responseBody00 Query biportal SAPRQL endpoint to get label for the given concept 2014-10-15 07:58:58.546 UTC net.sf.taverna.t2.activitiesrest-activity1.5net.sf.taverna.t2.activities.rest.RESTActivity GET http://sparql.bioontology.org/sparql/?apikey={apikey}&query={query} application/sparql-results+xml application/xml String false false false false true query java.lang.String apikey java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeget_label_sparql_queryvalue00 Get concept label SPARQL query 2014-10-15 07:56:57.303 UTC net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity PREFIX owl: <http://www.w3.org/2002/07/owl#> PREFIX rdf: <http://www.w3.org/2000/01/rdf-schema#> PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> PREFIX obo: <http://www.geneontology.org/formats/oboInOWL#> SELECT DISTINCT ?label { ?concept rdfs:label ?label. } net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokebind_urigetLabel0getSynonym0hpoURI0sparlGetLabel00sparqlGetSynonym00 Bind HPO URI to the sparql query and remove blank lines 2014-10-15 07:55:30.877 UTC net.sf.taverna.t2.activitiesbeanshell-activity1.5net.sf.taverna.t2.activities.beanshell.BeanshellActivity getLabel 0 text/plain java.lang.String true hpoURI 0 text/plain java.lang.String true getSynonym 0 text/plain java.lang.String true sparlGetLabel 0 0 sparqlGetSynonym 0 0 workflow net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokelabelxml_text0nodelist11 Extract label from the xml reponse 2014-10-15 08:00:22.52 UTC net.sf.taverna.t2.activitiesxpath-activity1.5net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <sparql xmlns="http://www.w3.org/2005/sparql-results#"> <head> <variable name="label"/> </head> <results> <result> <binding name="label"><literal datatype="http://www.w3.org/2001/XMLSchema#string">Amyotrophic lateral sclerosis</literal></binding> </result> </results> </sparql> /default:sparql/default:results/default:result/default:binding/default:literal default http://www.w3.org/2005/sparql-results# net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeget_synonym_sparql_queryvalue00 Get concept synonym SPARQL query 2014-10-15 07:57:16.200 UTC net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity PREFIX owl: <http://www.w3.org/2002/07/owl#> PREFIX rdf: <http://www.w3.org/2000/01/rdf-schema#> PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> PREFIX obo: <http://www.geneontology.org/formats/oboInOWL#> SELECT DISTINCT ?synonym { ?concept obo:hasExactSynonym ?synonym. } net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_Service_SYNONYMquery0apikey0responseBody00 Query biportal SAPRQL endpoint to get synonyms for the given concept 2014-10-15 07:59:33.916 UTC net.sf.taverna.t2.activitiesrest-activity1.5net.sf.taverna.t2.activities.rest.RESTActivity GET http://sparql.bioontology.org/sparql/?apikey={apikey}&query={query} application/sparql-results+xml application/xml String false false false false true query java.lang.String apikey java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokesynonymxml_text0nodelist11 Extract synonym from the xml reponse 2014-10-15 08:00:41.181 UTC net.sf.taverna.t2.activitiesxpath-activity1.5net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <sparql xmlns="http://www.w3.org/2005/sparql-results#"> <head> <variable name="synonym"/> </head> <results> <result> <binding name="synonym"><literal datatype="http://www.w3.org/2001/XMLSchema#string">Choreic movements</literal></binding> </result> <result> <binding name="synonym"><literal datatype="http://www.w3.org/2001/XMLSchema#string">Choreiform movements</literal></binding> </result> </results> </sparql> /default:sparql/default:results/default:result/default:binding/default:literal default http://www.w3.org/2005/sparql-results# net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeFlatten_List_2inputlist2outputlist11net.sf.taverna.t2.activitieslocalworker-activity1.5net.sf.taverna.t2.activities.localworker.LocalworkerActivity inputlist 2 l(l('')) [B true outputlist 1 l('') 1 workflow org.embl.ebi.escience.scuflworkers.java.FlattenList net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_Stringstringlist1seperator0concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.5net.sf.taverna.t2.activities.localworker.LocalworkerActivity stringlist 1 l('text/plain') java.lang.String true seperator 0 'text/plain' java.lang.String true concatenated 0 'text/plain' 0 workflow org.embl.ebi.escience.scuflworkers.java.StringListMerge net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeseperator_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity ; net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_String_2stringlist1seperator0concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.5net.sf.taverna.t2.activities.localworker.LocalworkerActivity stringlist 1 l('text/plain') java.lang.String true seperator 0 'text/plain' java.lang.String true concatenated 0 'text/plain' 0 workflow org.embl.ebi.escience.scuflworkers.java.StringListMerge net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeseperator_value_1value00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_String_3stringlist1seperator0concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.5net.sf.taverna.t2.activities.localworker.LocalworkerActivity stringlist 1 l('text/plain') java.lang.String true seperator 0 'text/plain' java.lang.String true concatenated 0 'text/plain' 0 workflow org.embl.ebi.escience.scuflworkers.java.StringListMerge net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeseperator_value_2value00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_Service_LABELquerybind_urisparlGetLabelREST_Service_LABELapikeybioportal_api_keybind_urigetLabelget_label_sparql_queryvaluebind_urigetSynonymget_synonym_sparql_queryvaluebind_urihpoURIhpoURIlabelxml_textREST_Service_LABELresponseBodyREST_Service_SYNONYMquerybind_urisparqlGetSynonymREST_Service_SYNONYMapikeybioportal_api_keysynonymxml_textREST_Service_SYNONYMresponseBodyFlatten_List_2inputlistsynonymnodelistMerge_String_List_to_a_StringstringlistFlatten_List_2outputlistMerge_String_List_to_a_Stringseperatorseperator_valuevalueMerge_String_List_to_a_String_2stringlistlabelnodelistMerge_String_List_to_a_String_2seperatorseperator_value_1valueMerge_String_List_to_a_String_3seperatorseperator_value_2valueMerge_String_List_to_a_String_3stringlistMerge_String_List_to_a_String_2concatenatedMerge_String_List_to_a_String_3stringlistMerge_String_List_to_a_StringconcatenatedrowMerge_String_List_to_a_String_3concatenated 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