FunctionalClusterDavids11responseBody0status0actualURL0REST_Serviceannot0ids0responseBody00status00actualURL00net.sf.taverna.t2.activitiesrest-activity1.5net.sf.taverna.t2.activities.rest.RESTActivity GET http://david.abcc.ncifcrf.gov/api.jsp?type=ENTREZ_GENE_ID&ids={ids}&tool=term2term&annot={annot} text/html application/xml String false false true false true annot java.lang.String ids java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeText_constantvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity GOTERM_BP_FAT,GOTERM_CC_FAT,GOTERM_MF_FAT,INTERPRO,PIR_SUPERFAMILY,SMART,BBID, BIOCARTA,KEGG_PATHWAY,COG_ONTOLOGY,SP_PIR_KEYWORDS,UP_SEQ_FEATURE,GENETIC_ASSOCIATION_DB_DISEASE, OMIM_DISEASE net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeOpen_web_browser_at_a_URLurl0net.sf.taverna.t2.activitieslocalworker-activity1.5net.sf.taverna.t2.activities.localworker.LocalworkerActivity url 0 text/plain java.lang.String true workflow net.sourceforge.taverna.scuflworkers.net.BrowseUrl net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_Stringseperator0stringlist1concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.5net.sf.taverna.t2.activities.localworker.LocalworkerActivity stringlist 1 l('text/plain') java.lang.String true seperator 0 'text/plain' java.lang.String true concatenated 0 'text/plain' 0 workflow org.embl.ebi.escience.scuflworkers.java.StringListMerge net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeseperator_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.5net.sf.taverna.t2.activities.stringconstant.StringConstantActivity , net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_ServiceannotText_constantvalueREST_ServiceidsMerge_String_List_to_a_StringconcatenatedOpen_web_browser_at_a_URLurlREST_ServiceactualURLMerge_String_List_to_a_Stringseperatorseperator_valuevalueMerge_String_List_to_a_StringstringlistidsresponseBodyREST_ServiceresponseBodystatusREST_ServicestatusactualURLREST_ServiceactualURL a75cda50-88d7-4718-b0b6-a4c278d4a9fc 2014-08-26 13:20:02.383 UTC 40f3323c-b600-46d3-b155-46af2abe5901 2014-09-03 08:51:14.327 UTC This workflow takes a list of Entrez Gene IDs as input and submits them to the DAVID REST API for functional clustering using OG annotaiton, biological pathways and disease associations. Used for analysing a set of genes (i.e. those differentially expressed for a particular disease condition). 2014-09-05 07:38:32.119 UTC ca607a23-5ec7-44e7-b2b9-f18c1470c601 2014-08-26 13:23:40.975 UTC FunctionalClusterDavid 2014-09-05 07:36:31.378 UTC 583d017b-e489-4676-af75-cc561423bd0b 2014-09-03 08:32:17.20 UTC 6101d933-e805-4693-b771-f4ec38e128a2 2014-09-05 07:38:32.323 UTC 12d80e58-9ada-412c-8ef0-219019e5120b 2014-08-26 13:23:02.997 UTC 995c48fd-bc97-40a6-88bb-a3237e5dfe62 2014-09-03 08:49:07.817 UTC 881727be-4039-4ade-9327-a23ce5f79411 2014-09-01 12:28:14.520 UTC 169ca213-ad1f-4c7f-94b0-618e73312822 2014-08-26 13:21:20.343 UTC 10619c9e-4f09-4081-b110-bbf5774e9f70 2014-09-03 08:44:37.459 UTC 65171507-6211-4b52-8b93-672e0d1752bf 2014-09-03 08:50:33.741 UTC 38a3c045-ae26-4b83-8974-a429455574de 2014-09-03 08:52:04.380 UTC 035fb463-4560-4ee1-bcc5-d47f1ae44393 2014-08-26 13:21:53.709 UTC Katy Wolstencroft 2014-09-05 07:36:18.479 UTC 2ef6ecfb-cd8d-457f-bb23-1bc02e61552b 2014-09-01 10:05:11.709 UTC