Download_images_for_gene00 The name of the gene 2014-07-15 14:15:05.604 UTC Adora2a 2014-07-15 14:15:14.110 UTC experiments0 The experiments for the gene 2014-07-15 14:15:44.733 UTC data_sets1 The data sets for the gene 2014-07-15 14:15:55.54 UTC section_images1 The section images for the gene 2014-07-15 14:16:04.581 UTC image_ids1 The ids of the images for the gene 2014-07-15 14:16:13.437 UTC images1 The images for the gene 2014-07-15 14:16:20.429 UTC AllenExperimentsForGenegene0responseBody00net.sf.taverna.t2.activitiesrest-activity1.5net.sf.taverna.t2.activities.rest.RESTActivity GET http://api.brain-map.org/api/v2/data/query.xml?criteria=model::SectionDataSet,rma::criteria,genes%5Bacronym$eq%27{gene}%27%5D&num_rows=2 application/xml application/xml String false false false false true gene java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeExtract_data_setxml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.5net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <Response success="true" start_row="0" num_rows="2" total_rows="15"><section-data-sets> <section-data-set> <blue-channel nil="true"/> <delegate>true</delegate> <expression>true</expression> <failed>false</failed> <failed-facet>734881840</failed-facet> <green-channel nil="true"/> <id>100074949</id> <name nil="true"/> <plane-of-section-id>2</plane-of-section-id> <qc-date>2009-09-24T10:35:35Z</qc-date> <red-channel nil="true"/> <reference-space-id>6</reference-space-id> <rnaseq-design-id nil="true"/> <section-thickness>20</section-thickness> <specimen-id>700948</specimen-id> <sphinx-id>90051</sphinx-id> <storage-directory>/external/devmouse/prod182/image_series_100074949/</storage-directory> <weight>5200</weight> </section-data-set> <section-data-set> <blue-channel nil="true"/> <delegate>false</delegate> <expression>false</expression> <failed>false</failed> <failed-facet>734881840</failed-facet> <green-channel nil="true"/> <id>100030844</id> <name nil="true"/> <plane-of-section-id>4</plane-of-section-id> <qc-date>2008-10-27T11:18:40Z</qc-date> <red-channel nil="true"/> <reference-space-id nil="true"/> <rnaseq-design-id nil="true"/> <section-thickness>25</section-thickness> <specimen-id>3297</specimen-id> <sphinx-id>35101</sphinx-id> <storage-directory nil="true"/> <weight>5060</weight> </section-data-set> </section-data-sets> </Response> /Response/section-data-sets/section-data-set/id net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeAllenImagesForDataSetdata_set0responseBody00net.sf.taverna.t2.activitiesrest-activity1.5net.sf.taverna.t2.activities.rest.RESTActivity GET http://api.brain-map.org/api/v2/data/query.xml?criteria=model::SectionImage,rma::criteria,%5Bdata_set_id$eq{data_set}%5D&num_rows=2 application/xml application/xml String false false false false true data_set java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeExtract_imagexml_text0firstNode00net.sf.taverna.t2.activitiesxpath-activity1.5net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <Response success="true" start_row="0" num_rows="11" total_rows="11"><section-images> <section-image> <annotated>false</annotated> <data-set-id>100030844</data-set-id> <expression-path>/external/spinalcord/prod15/0534328300/0534328300_expression.aff</expression-path> <failed>false</failed> <height>4160</height> <id>100666548</id> <image-height>45088</image-height> <image-type>Primary</image-type> <image-width>17488</image-width> <lims1-id>100666548</lims1-id> <path>/external/spinalcord/prod15/0534328300/0534328300.aff</path> <resolution>0.99</resolution> <section-number>65</section-number> <specimen-id nil="true"/> <structure-id>1134</structure-id> <tier-count>9</tier-count> <width>4288</width> <x>11392</x> <y>24368</y> </section-image> <section-image> <annotated>false</annotated> <data-set-id>100030844</data-set-id> <expression-path>/external/spinalcord/prod15/0534328300/0534328300_expression.aff</expression-path> <failed>false</failed> <height>4544</height> <id>100666540</id> <image-height>45088</image-height> <image-type>Primary</image-type> <image-width>17488</image-width> <lims1-id>100666540</lims1-id> <path>/external/spinalcord/prod15/0534328300/0534328300.aff</path> <resolution>0.99</resolution> <section-number>16</section-number> <specimen-id nil="true"/> <structure-id>1134</structure-id> <tier-count>9</tier-count> <width>4352</width> <x>11136</x> <y>35728</y> </section-image> <section-image> <annotated>false</annotated> <data-set-id>100030844</data-set-id> <expression-path>/external/spinalcord/prod15/0534328300/0534328300_expression.aff</expression-path> <failed>false</failed> <height>4160</height> <id>100666542</id> <image-height>45088</image-height> <image-type>Primary</image-type> <image-width>17488</image-width> <lims1-id>100666542</lims1-id> <path>/external/spinalcord/prod15/0534328300/0534328300.aff</path> <resolution>0.99</resolution> <section-number>408</section-number> <specimen-id nil="true"/> <structure-id>1134</structure-id> <tier-count>9</tier-count> <width>3024</width> <x>3632</x> <y>35440</y> </section-image> <section-image> <annotated>false</annotated> <data-set-id>100030844</data-set-id> <expression-path>/external/spinalcord/prod15/0534328300/0534328300_expression.aff</expression-path> <failed>false</failed> <height>4160</height> <id>100666556</id> <image-height>45088</image-height> <image-type>Primary</image-type> <image-width>17488</image-width> <lims1-id>100666556</lims1-id> <path>/external/spinalcord/prod15/0534328300/0534328300.aff</path> <resolution>0.99</resolution> <section-number>114</section-number> <specimen-id nil="true"/> <structure-id>1134</structure-id> <tier-count>9</tier-count> <width>4320</width> <x>12032</x> <y>11424</y> </section-image> <section-image> <annotated>false</annotated> <data-set-id>100030844</data-set-id> <expression-path>/external/spinalcord/prod15/0534328300/0534328300_expression.aff</expression-path> <failed>false</failed> <height>4160</height> <id>100666550</id> <image-height>45088</image-height> <image-type>Primary</image-type> <image-width>17488</image-width> <lims1-id>100666550</lims1-id> <path>/external/spinalcord/prod15/0534328300/0534328300.aff</path> <resolution>0.99</resolution> <section-number>457</section-number> <specimen-id nil="true"/> <structure-id>1134</structure-id> <tier-count>9</tier-count> <width>3376</width> <x>3680</x> <y>24160</y> </section-image> <section-image> <annotated>false</annotated> <data-set-id>100030844</data-set-id> <expression-path>/external/spinalcord/prod15/0534328300/0534328300_expression.aff</expression-path> <failed>false</failed> <height>4160</height> <id>100666558</id> <image-height>45088</image-height> <image-type>Primary</image-type> <image-width>17488</image-width> <lims1-id>100666558</lims1-id> <path>/external/spinalcord/prod15/0534328300/0534328300.aff</path> <resolution>0.99</resolution> <section-number>506</section-number> <specimen-id nil="true"/> <structure-id>1134</structure-id> <tier-count>9</tier-count> <width>3504</width> <x>4128</x> <y>11136</y> </section-image> <section-image> <annotated>false</annotated> <data-set-id>100030844</data-set-id> <expression-path>/external/spinalcord/prod15/0534328300/0534328300_expression.aff</expression-path> <failed>false</failed> <height>4160</height> <id>100666551</id> <image-height>45088</image-height> <image-type>Primary</image-type> <image-width>17488</image-width> <lims1-id>100666551</lims1-id> <path>/external/spinalcord/prod15/0534328300/0534328300.aff</path> <resolution>0.99</resolution> <section-number>653</section-number> <specimen-id nil="true"/> <structure-id>1134</structure-id> <tier-count>9</tier-count> <width>3088</width> <x>560</x> <y>23952</y> </section-image> <section-image> <annotated>false</annotated> <data-set-id>100030844</data-set-id> <expression-path>/external/spinalcord/prod15/0534328300/0534328300_expression.aff</expression-path> <failed>false</failed> <height>4160</height> <id>100666557</id> <image-height>45088</image-height> <image-type>Primary</image-type> <image-width>17488</image-width> <lims1-id>100666557</lims1-id> <path>/external/spinalcord/prod15/0534328300/0534328300.aff</path> <resolution>0.99</resolution> <section-number>310</section-number> <specimen-id nil="true"/> <structure-id>1134</structure-id> <tier-count>9</tier-count> <width>3776</width> <x>7664</x> <y>11312</y> </section-image> <section-image> <annotated>false</annotated> <data-set-id>100030844</data-set-id> <expression-path>/external/spinalcord/prod15/0534328300/0534328300_expression.aff</expression-path> <failed>false</failed> <height>4160</height> <id>100666541</id> <image-height>45088</image-height> <image-type>Primary</image-type> <image-width>17488</image-width> <lims1-id>100666541</lims1-id> <path>/external/spinalcord/prod15/0534328300/0534328300.aff</path> <resolution>0.99</resolution> <section-number>212</section-number> <specimen-id nil="true"/> <structure-id>1134</structure-id> <tier-count>9</tier-count> <width>3856</width> <x>6816</x> <y>35408</y> </section-image> <section-image> <annotated>false</annotated> <data-set-id>100030844</data-set-id> <expression-path>/external/spinalcord/prod15/0534328300/0534328300_expression.aff</expression-path> <failed>false</failed> <height>4160</height> <id>100666549</id> <image-height>45088</image-height> <image-type>Primary</image-type> <image-width>17488</image-width> <lims1-id>100666549</lims1-id> <path>/external/spinalcord/prod15/0534328300/0534328300.aff</path> <resolution>0.99</resolution> <section-number>261</section-number> <specimen-id nil="true"/> <structure-id>1134</structure-id> <tier-count>9</tier-count> <width>3664</width> <x>7088</x> <y>24192</y> </section-image> <section-image> <annotated>false</annotated> <data-set-id>100030844</data-set-id> <expression-path>/external/spinalcord/prod15/0534328300/0534328300_expression.aff</expression-path> <failed>false</failed> <height>4128</height> <id>100666559</id> <image-height>45088</image-height> <image-type>Primary</image-type> <image-width>17488</image-width> <lims1-id>100666559</lims1-id> <path>/external/spinalcord/prod15/0534328300/0534328300.aff</path> <resolution>0.99</resolution> <section-number>702</section-number> <specimen-id nil="true"/> <structure-id>1134</structure-id> <tier-count>9</tier-count> <width>3472</width> <x>512</x> <y>11056</y> </section-image> </section-images> </Response> /Response/section-images/section-image/id net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeAllenDownloadImageimage0responseBody00net.sf.taverna.t2.activitiesrest-activity1.5net.sf.taverna.t2.activities.rest.RESTActivity GET http://api.brain-map.org/api/v2/section_image_download/{image} image/jpeg application/xml String false false false false true image java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeAllenExperimentsForGenegenegeneExtract_data_setxml_textAllenExperimentsForGeneresponseBodyAllenImagesForDataSetdata_setExtract_data_setnodelistExtract_imagexml_textAllenImagesForDataSetresponseBodyAllenDownloadImageimageExtract_imagefirstNodeexperimentsAllenExperimentsForGeneresponseBodydata_setsExtract_data_setnodelistsection_imagesAllenImagesForDataSetresponseBodyimage_idsExtract_imagefirstNodeimagesAllenDownloadImageresponseBody c068ca06-7e96-4258-862e-67025f92d6fe 2014-07-15 14:20:45.509 UTC 0ddbaebd-a3a7-4170-8ba1-e7e318f8a0d3 2014-07-15 14:18:41.633 UTC 61a4a4b1-13ec-4859-8359-ac81fdf04c9e 2014-07-13 18:18:48.116 UTC c8aadb74-75a2-440d-8d2e-15c5e1394c9b 2014-07-13 18:27:05.908 UTC 27bd5c4b-85e3-4b54-95bf-10dc7456e6ec 2014-07-13 18:24:46.836 UTC 59101f13-be3d-4d52-b410-1551ee825013 2014-07-13 16:42:56.927 UTC 57edcd64-f80b-4d99-883d-176fd8d85373 2014-07-13 16:39:50.890 UTC fadb5575-3d43-4ad8-b4b1-27595d65fef4 2014-07-13 16:39:26.357 UTC db562547-e158-4f70-9ccf-8856af096225 2014-07-13 18:28:35.320 UTC a46f161e-c798-4b47-900d-511b0eb0c868 2014-07-13 16:52:22.935 UTC a25f3733-50a6-4ab9-9c29-d245db1e9e8c 2014-07-13 18:31:17.683 UTC Alan R Williams 2014-07-13 18:36:18.229 UTC f5aee557-d1be-43d2-93bd-74e1dce60c48 2014-07-13 18:36:47.534 UTC Download images for gene 2014-07-13 18:36:39.994 UTC 056ddda1-98a1-432c-9fc0-70616ee6a3d3 2014-07-13 16:43:28.217 UTC This workflow downloads the first few images corresponding to experiments for the specified gene 2014-07-15 14:20:42.261 UTC 581c3def-e1f5-42bc-bf60-2e6e0961439e 2014-07-13 16:36:57.556 UTC