Tuto Galaxy 2013 : CPB2012 - BasicProtocol1 Human coding exon

Created: 2014-02-27 11:47:20 Last updated: 2014-06-10 09:13:13

Download Workflow

Workflow used when applying the CPB2012 Basic Protocol 1 tutorial from Galaxy team. It permits to filter Exons with the most SNP density.

Preview

Download as scalable diagram (SVG)

Import

Not currently available.

Workflow Components

Inputs (3)

Name	Description
Input Exon
Input SNP
min	runtime parameter for tool Join

Steps (9)

Name	Tool	Description
Input dataset	None
Input dataset	None
Join	gops_join_1
Add column	addValue
Count	Count1
Count	Count1
Sort	sort1
Select first	Show beginning1
Compare two Datasets	comp1

Outputs (7)

Name	Type
output	interval
out_file1	input
out_file1	tabular
out_file1	tabular
out_file1	input
out_file1	input
out_file1	input

Information Workflow Type

Galaxy

Information Uploader

Ylebras

Information License

All versions of this Workflow are licensed under:

Information Version 1 (of 1)

Information Credits (1)

(People/Groups)

Ylebras

Information Attributions (0)

(Workflows/Files)

None

Information Tags (4)

Uploader tags

cpb2012
|
exons
|
ngs
|
snp

Log in to add Tags

Information Shared with Groups (0)

None

Information Featured In Packs (0)

None

Log in to add to one of your Packs

Information Attributed By (0)

(Workflows/Files)

None

Information Favourited By (0)

No one

Information Statistics

872 viewings

615 downloads

[ see breakdown ]

Citations (1)

1. Y. Le Bras, A. Roult, C. Monjeaud, M. Bahin, O. Quenez, C. Heriveau, A. Bretaudeau, O. Sallou, O. Collin, Towards a Life Sciences Virtual Research Environment : an e-Science initiative in Western France, JOBIM 2013, 03 July 2013, https://www.e-biogenouest.org/resources/128

Version History

In chronological order:

Tuto Galaxy 2013 : CPB2012 - BasicProtocol1 Human coding exon

Created by Ylebras on Thursday 27 February 2014 11:47:20 (UTC)

Last edited by Ylebras on Friday 28 February 2014 10:36:01 (UTC)

Reviews (0)

No reviews yet

Be the first to review!

Comments (0)

View Timeline

No comments yet

Log in to make a comment

Other workflows that use similar services (0)

There are no workflows in myExperiment that use similar services to this Workflow.