Input dataset
output
Input dataset
output
Input dataset
output
Input dataset
output
Input dataset
output
KmerFreq AR
libraries 1 > Forward FASTQ file
libraries 1 > Reverse FASTQ file
filelist
stat
cz_len
cz
genome_estimate
space_stat
space_cz_len
space_cz
space_genome_estimate
Corrector AR
List of input files
Compressed frequency file of consecutive Kmer frequency data
Block length of consecutive kmer compressed file
html_file
corrected_forward
corrected_reverse
corrected_single
SOAPdenovo2
libraries 1 > files 1 > Forward FASTQ Gzipped file
libraries 1 > files 1 > Reverse FASTQ Gzipped file
libraries 2 > files 1 > Forward FASTQ file
libraries 2 > files 1 > Reverse FASTQ file
contig
scafseq
config
GapCloser
Scaffold file for gap closing
Select configuration file from history
scaff
fill_info
Extract ACGT
scaffolds
scafseq_gc_ctg_fa
GAGE evaluation
Reference genome file in FASTA format
Contig file in FASTA format
Scaffold file in FASTA format
outfile