genscan_shim_example.xml

Created: 2008-07-30 15:05:06 Last updated: 2008-07-30 15:11:53

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Workflow Components

Inputs (1)

Name	Description
dna

Processors (5)

Name	Type	Description
searchSimple	arbitrarywsdl
database	stringconstant
program	stringconstant
genscan	soaplabwsdl	Runs genscan on the input sequence
patmatmotifs	soaplabwsdl	Search a PROSITE motif database with a protein sequence

Beanshells (0)

Outputs (3)

Name	Description
blast_out
Prosite_matches
genscan_report

Links (8)

Source	Sink
dna	genscan:sequence_direct_data
database:value	searchSimple:database
genscan:output	genscan_report
genscan:output	patmatmotifs:sequence_direct_data
genscan:output	searchSimple:query
patmatmotifs:outfile	Prosite_matches
program:value	searchSimple:program
searchSimple:Result	blast_out

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Taverna 1

Information Uploader

Thomas Burkard

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Information Version 1 (of 1)

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Katy Wolstencroft

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EraSysBio_Tutorial

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Information Statistics

1903 viewings

1702 downloads

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genscan_shim_example.xml

Created by Thomas Burkard on Wednesday 30 July 2008 15:05:06 (UTC)

Last edited by Thomas Burkard on Wednesday 30 July 2008 15:11:53 (UTC)