Infer_and_validate_PNexusFile00 MSA (Multiple Sequence Alignment) and model of evolution in nexus format with Mrbayes block 2013-02-20 13:05:29.481 UTC Plot Result of the Posterior Predictive test. Histogram of the distribution of the complexities (log of sum of sites entropy or maximal possible loglikelihood score) of the simulated data using the posterior distribution parameters compared with observed data complexity. The 1-alpha high posterior density of the distribution show the region where simulate data complexity match the observed one. Larger observed complexity indicates model too simplistic, while the contrary indicates overparametrization of the model. 2013-02-19 10:52:20.291 UTC newickTree small xml with tag res with one or more tag tree each one with a body that contain a tree in netwick format. each tree represent the consensus for a given partition of group of partition in the same order that are cited in the nexus input file of mrbayes 2013-02-19 10:51:48.519 UTC <res><tree>(ADD09384_1_555_ADD09384:1.18452,ABY27676_1_453_ABY27676:0.16674,(ACM89220_1_657_ACM89220:0.16271,(ADJ82639_1_645_ADJ82639:0.15654,(ADW58631_1_657_ADW58631:0.00298,ADW58691_1_657_ADW58691:0.00584)1.00:0.07383)0.98:0.04988,(ADW61587_1_657_ADW61587:0.10163,(ADH12119_1_645_ADH12119:0.14993,ADQ21240_1_648_ADQ21240:0.15645)0.90:0.06174)0.89:0.07555,(AEC60810_1_657_AEC60810:0.13396,((AEE92862_1_657_AEE92862:0.00180,AEE92882_1_657_AEE92882:0.00294)0.93:0.01820,(AEE92860_1_648_AEE92860:0.00172,AEE92867_1_642_AEE92867:0.00260,AEE92861_1_633_AEE92861:0.00326)0.85:0.01568)1.00:0.18625)0.99:0.14972)0.63:0.13345);</tree></res> 2013-02-19 10:51:25.542 UTC Geoks Restul of the GeoKS test of convergence. XML format 2013-02-20 12:54:07.319 UTC <result><success>True</success><burnin>16</burnin><pvalues>0.962205</pvalues></result> 2013-02-20 12:54:16.872 UTC DefineAndSubmit_Phylogenetic_inferNexusFile0NexusFileName00net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeRetrieveANDValidatePhylogenetic_inferJobID0NexusFileName0GeoKS_Result22newickTree55Plot77net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDefineAndSubmit_Phylogenetic_inferNexusFileNexusFileRetrieveANDValidatePhylogenetic_inferNexusFileNameDefineAndSubmit_Phylogenetic_inferNexusFileNamePlotRetrieveANDValidatePhylogenetic_inferPlotnewickTreeRetrieveANDValidatePhylogenetic_infernewickTreeGeoksRetrieveANDValidatePhylogenetic_inferGeoKS_Result Infer and validate Phylogeny - short run 2013-02-20 13:06:01.832 UTC 8ddc452d-4c6f-4d0f-9f04-0702a92ce1e4 2013-02-20 13:08:15.840 UTC fdebe370-df01-45ee-b953-d307ea7f7611 2013-02-20 12:57:15.288 UTC Phylogenetic inference with MrBayes. Perform inference and test of MCMC convergence (GEOKS) and fit of the model on the data (Posterior Predictive test) 2013-02-20 13:07:34.218 UTC 2e735a0a-988b-4bba-9e5d-f02944cd0d24 2013-02-19 11:04:22.96 UTC c5490cfd-6edc-4a98-9707-0156b575bc8f 2013-02-20 08:09:23.860 UTC cd487d97-579b-41f4-8bc6-88371a1703df 2013-02-19 10:52:29.614 UTC 720468b1-9aa9-4ef0-b899-11ff5acdaeae 2013-02-20 13:01:01.531 UTC b65fb5fb-4c3b-40ed-a1e5-d2885cb2a39b 2013-02-20 12:18:35.247 UTC 5dfb9d2c-95e6-415d-8c9f-847ec107140e 2013-02-19 16:37:16.674 UTC b80541d1-48a8-4314-9512-98cb5fe1c276 2013-02-20 12:52:49.895 UTC 209b2582-51a0-46a2-a9c0-95d84a951f78 2013-02-20 12:20:20.688 UTC c588ab33-7f5a-459a-8fad-f9d4bac96b63 2013-02-20 11:58:19.43 UTC 28272e3a-e84b-43b1-86d1-719387da9aa6 2013-02-20 09:36:45.90 UTC b65ae63c-cf7f-4384-8b9c-aece027538cd 2013-02-20 13:07:17.703 UTC saverio vicario giacinto donvito bachir balech 2013-02-19 10:54:10.67 UTC 03d8d882-866c-4a86-85f1-1c0a266fcfa1 2013-02-19 17:17:37.373 UTC 46ead065-bb6f-41d4-af8c-bb7ccffc75e3 2013-02-19 10:50:28.376 UTC 0a9f163f-c9f6-482e-9e48-76b1971e6520 2013-02-20 12:54:19.239 UTC Workflow20Sentinel00DummyOutText_constantvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity Ciao net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketellmessage0net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity message 0 java.lang.String true title 0 java.lang.String true answer 0 0 tell VelocityTemplate false net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokemessage_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity Convergence of MCMC reached! net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketellmessagemessage_valuevalueDummyOutText_constantvalue 6be543cf-0a7e-4305-b7fc-1efaee8b413c 2012-11-28 17:08:36.500 UTC 844a0428-c2a3-43f5-8f4f-d6609f20cc40 2013-01-31 10:56:51.471 UTC ac938b2a-fe53-450b-8315-fd10b043ea40 2012-11-28 17:07:09.459 UTC Workflow14Name00Argument00StatusOutput_PathXML_ReportREST_Servicename0arguments0responseBody00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity GET http://alicegrid17.ba.infn.it:8080/INFN.Grid.FrontEnd/services/QueryJob/InsertJobs?NAME={name}&arguments={arguments} application/xml application/xml String false false false false true arguments java.lang.String name java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Servicexml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <Job><Name>blast</Name><Flag>7772590c-d7ab-4b76-98b9-aa293c6c34fe</Flag><JobsID><JobId>454118</JobId></JobsID></Job> /Job/JobsID/JobId net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeWorkflow36JobID0Status00Output00StandardOuput11net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop <activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns=""> <inputs> <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> <name>Status</name> <depth>0</depth> <translatedElementType>java.lang.String</translatedElementType> <allowsLiteralValues>true</allowsLiteralValues> </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> </inputs> <outputs> <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> <name>loop</name> <depth>0</depth> <granularDepth>0</granularDepth> </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> </outputs> <classLoaderSharing>workflow</classLoaderSharing> <localDependencies /> <artifactDependencies /> <script>loop = "" + ! Status.equals("done"); if ("true".matches(loop)) { Thread.sleep(2000); }</script> <dependencies /> </net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity> true net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_ServicenameNameREST_ServiceargumentsArgumentXPath_Servicexml_textREST_ServiceresponseBodyWorkflow36JobIDXPath_ServicenodelistStatusWorkflow36StatusOutput_PathWorkflow36OutputXML_ReportWorkflow36StandardOuput be8cd221-9345-4c91-9fb4-b413978b0a6a 2011-11-30 16:05:00.470 UTC 0b2a7cd3-3853-434d-b462-4a2d7796ea7d 2011-11-30 15:48:49.960 UTC 3c9f8d96-0c37-4a18-8214-289acc1482fb 2011-11-30 16:02:25.713 UTC a2b6b247-c946-4883-8d6d-469ea6573f93 2011-11-30 15:51:07.192 UTC 3aba8bc3-36ee-473d-a504-288a1f9998df 2011-11-30 16:07:49.591 UTC 2bb836b5-2738-4f3f-864d-5a77e76bdd1f 2011-11-30 17:09:13.282 UTC a3848c5b-b720-4bc7-8e8a-d0a4e305b43f 2012-04-02 16:09:05.883 UTC 15c52e11-e32b-46b2-857c-89226396dc45 2011-11-30 15:41:58.998 UTC 7b7863ae-a026-4317-8084-9a00049fccf8 2012-04-05 11:23:09.57 UTC e4960fd7-230d-477c-b7d0-c78c52b1924a 2012-11-28 17:15:39.209 UTC 36001f84-a643-4173-80ee-118a0ceaecbc 2011-11-30 17:10:08.264 UTC bcc60618-7449-4965-b39d-d0d6d90ec7db 2011-11-30 15:49:46.56 UTC 4afab38a-1fec-43b4-8a32-83eaa59e8b8d 2011-11-30 15:53:41.975 UTC 38b1f6f3-d29c-408a-9360-46930d61cff7 2012-05-04 09:55:44.596 UTC 97c8a203-1938-4e3f-90f3-87694c3a795a 2011-11-30 15:59:45.57 UTC e43a348a-e348-4438-8177-6417a492404c 2012-10-02 09:13:25.977 UTC 745b7346-e8be-4864-ba02-1ae1d255f50d 2012-04-05 09:28:59.571 UTC 5f07e956-6857-4261-ae1e-1ab5ba32ab08 2011-11-30 16:07:05.176 UTC 4cc9395d-b178-451b-aef7-a34678d0d490 2011-11-30 15:51:55.76 UTC 25d638c9-672c-498e-913b-4bceb4230f8e 2011-11-30 17:10:59.924 UTC 8a70d234-45be-42bd-8bff-039af9b1c962 2011-11-30 16:26:18.954 UTC a65689de-3539-4833-9e3e-c32aa9237d39 2011-11-30 15:52:17.202 UTC bed4b280-a552-4ad9-8bfe-54a2fabae11f 2012-04-05 09:41:33.486 UTC e2682dca-1389-49ad-a886-491fa918d268 2011-11-30 15:54:01.684 UTC b9cf606e-166f-471c-b51e-d2f517526ad1 2011-11-30 17:00:56.590 UTC 0ca845f5-dbee-4c11-8b69-2843a6c7e40e 2012-05-03 15:26:02.481 UTC 857db6d7-3775-4738-bf94-5c6a78c1fb8b 2011-11-30 16:00:08.58 UTC eb0a0648-1196-4215-b698-acb8729bf045 2011-11-30 15:47:24.13 UTC bda5ff28-ff17-4ff2-9191-13acd55b73f3 2011-11-30 17:07:35.484 UTC Workflow36JobID00StatusOutputStandardOuputREST_Service_2JobID0responseBody00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity GET http://alicegrid17.ba.infn.it:8080/INFN.Grid.FrontEnd/services/QueryJob/SelectJob?IdJob={JobID} application/xml application/xml String false false false false true JobID java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_2xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <Jobs><Job><Arguments>http://webtest.ba.infn.it/vicario/FinalFusariumDB_2.nex 5700.fa 10589.fbsse se selknlk noiho niooih r </Arguments><Comment>interactive</Comment><CPUs>7</CPUs><Flag>2dbbd030-2803-43c0-a21d-369a21e17f2b</Flag><Id>349177</Id><LastCheck>2011-11-18 12:54:01.0</LastCheck><Name>MyBlasts</Name><Output/><Provenance/><Status>free</Status></Job></Jobs> /Jobs/Job/Status net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_Stringstringlist1seperator0concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity stringlist 1 l('text/plain') java.lang.String true seperator 0 'text/plain' java.lang.String true concatenated 0 'text/plain' 0 workflow org.embl.ebi.escience.scuflworkers.java.StringListMerge net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeseperator_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_2_2xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <Jobs><Job><Arguments>http://webtest.ba.infn.it/vicario/FinalFusariumDB_2.nex 5700.fa 10589.fbsse se selknlk noiho niooih r </Arguments><Comment>interactive</Comment><CPUs>7</CPUs><Flag>2dbbd030-2803-43c0-a21d-369a21e17f2b</Flag><Id>349177</Id><LastCheck>2011-11-18 12:54:01.0</LastCheck><Name>MyBlasts</Name><Output/><Provenance/><Status>free</Status></Job></Jobs> /Jobs/Job/Output net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_String_2stringlist1seperator0concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity stringlist 1 l('text/plain') java.lang.String true seperator 0 'text/plain' java.lang.String true concatenated 0 'text/plain' 0 workflow org.embl.ebi.escience.scuflworkers.java.StringListMerge net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_2_2_2xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <Jobs><Job><Arguments>http://testjst.ba.infn.it/giacintoAraneaeNuc.fas 1,2,5 2e-10</Arguments><Comment>interactive</Comment><CPUs>1</CPUs><Flag>46d409fa-c716-4e69-8e2d-0286a2ddd11c</Flag><Id>454291</Id><LastCheck>2012-04-30 11:53:07.0</LastCheck><Name>ProfileFrameFinder</Name><Output/><Provenance/><StadardOutput> </StadardOutput><Status>2104118383</Status></Job></Jobs> /Jobs/Job/StadardOutput net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_Service_2JobIDJobIDXPath_Service_2xml_textREST_Service_2responseBodyMerge_String_List_to_a_StringstringlistXPath_Service_2nodelistMerge_String_List_to_a_Stringseperatorseperator_valuevalueXPath_Service_2_2xml_textREST_Service_2responseBodyMerge_String_List_to_a_String_2stringlistXPath_Service_2_2nodelistMerge_String_List_to_a_String_2seperatorseperator_valuevalueXPath_Service_2_2_2xml_textREST_Service_2responseBodyStatusMerge_String_List_to_a_StringconcatenatedOutputMerge_String_List_to_a_String_2concatenatedStandardOuputXPath_Service_2_2_2nodelist a86eb045-aff2-46b1-ad28-5aaa0ca632c8 2011-11-30 17:07:17.999 UTC d55f213c-926c-42e9-8661-b736e95873aa 2011-11-30 16:18:57.829 UTC cdf36b60-31c3-441b-85ad-e8b0d3ede120 2011-11-30 16:25:32.213 UTC 2d403c97-a8ff-4771-af6a-87a0acb58104 2012-05-04 09:54:50.672 UTC c449dc7c-7655-484b-a369-a771da9a838b 2012-04-02 16:08:18.498 UTC 5aef3e63-9bb3-4905-9214-52026f781425 2011-11-30 16:10:33.343 UTC Workflow31NewickString00DummyOutputPhylowidgetUrl_FormatNewickString0output00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity NewickString 0 'text/plain' java.lang.String true output 0 0 workflow org.embl.ebi.escience.scuflworkers.java.StringConcat UserNameHere 2012-09-27 14:39:23.133 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeOpen_web_browser_at_a_URLurl0net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity url 0 text/plain java.lang.String true workflow net.sourceforge.taverna.scuflworkers.net.BrowseUrl net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeString_Dummyvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity Dummy net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokePhylowidgetUrl_FormatNewickStringNewickStringOpen_web_browser_at_a_URLurlPhylowidgetUrl_FormatoutputDummyOutputString_Dummyvalue 173b1324-1c04-4f17-aec5-ae978e4ca45c 2012-09-19 14:15:51.875 UTC dcf9de06-cf7c-4eea-b489-02191f6ca434 2012-09-19 14:17:48.154 UTC b4cfd2e4-e9ce-4e4e-9682-b1121b3d5c2b 2012-09-27 14:48:25.177 UTC fd4ec537-c4ae-4723-bdda-806c22763297 2012-09-19 13:53:54.502 UTC 51ceffe6-96f1-4c6a-90dd-3f1592ae64ef 2012-09-19 13:43:51.58 UTC 708f85ff-84f0-4cbf-9b1a-d51ee37546d0 2012-09-19 14:20:01.726 UTC 78ac2c65-bf08-4d50-81a5-e08a5a57a84b 2012-09-27 14:39:35.106 UTC 8466c904-a52b-4cc0-b17c-fb262ace7e2a 2012-10-01 10:20:05.561 UTC 4506e1eb-0813-4cd1-aac7-cd0b709a8037 2012-09-19 13:58:10.513 UTC e5db23d7-2d15-4289-a578-848005d60517 2012-10-01 10:21:11.664 UTC Workflow14Name00Argument00StatusOutput_PathGeoKS_ResultREST_Servicename0arguments0responseBody00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity GET http://alicegrid17.ba.infn.it:8080/INFN.Grid.FrontEnd/services/QueryJob/InsertJobs?NAME={name}&arguments={arguments} application/xml application/xml String false false false false true arguments java.lang.String name java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Servicexml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <Job><Name>blast</Name><Flag>7772590c-d7ab-4b76-98b9-aa293c6c34fe</Flag><JobsID><JobId>454118</JobId></JobsID></Job> /Job/JobsID/JobId net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeWorkflow36JobID0Status00Output00StandardOuput11net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop <activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns=""> <inputs> <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> <name>Status</name> <depth>0</depth> <translatedElementType>java.lang.String</translatedElementType> <allowsLiteralValues>true</allowsLiteralValues> </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> </inputs> <outputs> <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> <name>loop</name> <depth>0</depth> <granularDepth>0</granularDepth> </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> </outputs> <classLoaderSharing>workflow</classLoaderSharing> <localDependencies /> <artifactDependencies /> <script>loop = "" + ! Status.equals("done"); if ("true".matches(loop)) { Thread.sleep(5000); }</script> <dependencies /> </net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity> true net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_ServicenameNameREST_ServiceargumentsArgumentXPath_Servicexml_textREST_ServiceresponseBodyWorkflow36JobIDXPath_ServicenodelistStatusWorkflow36StatusOutput_PathWorkflow36OutputGeoKS_ResultWorkflow36StandardOuput e2682dca-1389-49ad-a886-491fa918d268 2011-11-30 15:54:01.684 UTC a3848c5b-b720-4bc7-8e8a-d0a4e305b43f 2012-04-02 16:09:05.883 UTC 4afab38a-1fec-43b4-8a32-83eaa59e8b8d 2011-11-30 15:53:41.975 UTC eb0a0648-1196-4215-b698-acb8729bf045 2011-11-30 15:47:24.13 UTC 3c9f8d96-0c37-4a18-8214-289acc1482fb 2011-11-30 16:02:25.713 UTC bed4b280-a552-4ad9-8bfe-54a2fabae11f 2012-04-05 09:41:33.486 UTC 0b2a7cd3-3853-434d-b462-4a2d7796ea7d 2011-11-30 15:48:49.960 UTC 857db6d7-3775-4738-bf94-5c6a78c1fb8b 2011-11-30 16:00:08.58 UTC 7b7863ae-a026-4317-8084-9a00049fccf8 2012-04-05 11:23:09.57 UTC 5f07e956-6857-4261-ae1e-1ab5ba32ab08 2011-11-30 16:07:05.176 UTC a2b6b247-c946-4883-8d6d-469ea6573f93 2011-11-30 15:51:07.192 UTC 97c8a203-1938-4e3f-90f3-87694c3a795a 2011-11-30 15:59:45.57 UTC 8a70d234-45be-42bd-8bff-039af9b1c962 2011-11-30 16:26:18.954 UTC 0ca845f5-dbee-4c11-8b69-2843a6c7e40e 2012-05-03 15:26:02.481 UTC 3aba8bc3-36ee-473d-a504-288a1f9998df 2011-11-30 16:07:49.591 UTC be8cd221-9345-4c91-9fb4-b413978b0a6a 2011-11-30 16:05:00.470 UTC bcc60618-7449-4965-b39d-d0d6d90ec7db 2011-11-30 15:49:46.56 UTC 745b7346-e8be-4864-ba02-1ae1d255f50d 2012-04-05 09:28:59.571 UTC 36001f84-a643-4173-80ee-118a0ceaecbc 2011-11-30 17:10:08.264 UTC 38b1f6f3-d29c-408a-9360-46930d61cff7 2012-05-04 09:55:44.596 UTC cd9f15fa-0819-4ddd-b6ab-6778ac424da1 2012-06-08 09:36:42.175 UTC bda5ff28-ff17-4ff2-9191-13acd55b73f3 2011-11-30 17:07:35.484 UTC a65689de-3539-4833-9e3e-c32aa9237d39 2011-11-30 15:52:17.202 UTC 15c52e11-e32b-46b2-857c-89226396dc45 2011-11-30 15:41:58.998 UTC 2bb836b5-2738-4f3f-864d-5a77e76bdd1f 2011-11-30 17:09:13.282 UTC 25d638c9-672c-498e-913b-4bceb4230f8e 2011-11-30 17:10:59.924 UTC 172155eb-f362-4e26-a727-3dadee48b001 2012-06-08 08:32:03.597 UTC b9cf606e-166f-471c-b51e-d2f517526ad1 2011-11-30 17:00:56.590 UTC 4cc9395d-b178-451b-aef7-a34678d0d490 2011-11-30 15:51:55.76 UTC Workflow1URL00FullyDummyOutputInteractiondestination0net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity destination 0 text/plain java.lang.String false http://www.mygrid.org.uk/taverna/internal/biovel/open_url.html LocallyPresentedHtml true net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeString_constantvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity DummyOutput net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeInteractiondestinationURLFullyDummyOutputString_constantvalue c10b71f9-b7bf-4eb7-bf51-b08d68abeb15 2012-05-10 07:45:40.839 UTC 8ba75a8c-c9e1-4939-a604-f832383af079 2012-05-04 20:12:33.214 UTC 11f188b9-1ba3-478c-a8af-73369e0b7750 2012-05-04 20:21:24.403 UTC e67a37fd-4c95-4b40-a88e-c4c1903f2f80 2012-05-04 20:12:04.919 UTC 55542b17-acee-4db7-91d0-f98393aa66f3 2012-05-04 22:48:22.640 UTC Workflow1File_name00InputBody00REST_Service_responseBodyREST_Service_statusREST_Service_redirectionREST_Servicefile_name0inputBody0responseBody00status00redirection00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity PUT http://testjst.ba.infn.it/openacces/{file_name} application/xml application/xml String false true false false true file_name java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_Servicefile_nameFile_nameREST_ServiceinputBodyInputBodyREST_Service_responseBodyREST_ServiceresponseBodyREST_Service_statusREST_ServicestatusREST_Service_redirectionREST_Serviceredirection 8513ae60-119a-414f-915e-bca0bb7a7734 2012-05-05 05:31:39.298 UTC acb3452e-6be0-4669-9e84-22808ff471cc 2012-05-03 15:46:36.879 UTC ffce4883-3f94-487f-9c25-e2e7bcdeb244 2012-05-06 19:42:14.223 UTC d5aa2bb0-c984-456c-9ec2-df78463f1914 2012-05-01 08:39:00.787 UTC ce6b1735-eb91-4d53-8e9b-ff43089857cd 2012-05-02 12:54:46.975 UTC d6bd51d4-54a3-4e41-ab79-ee29ecca40cf 2012-05-03 15:34:45.183 UTC aff47fd7-0af5-47c0-afc2-a6f5ab27b564 2012-04-30 14:16:40.142 UTC 580e799c-bc6e-42d7-a347-e10430e1af0a 2012-05-05 05:36:11.643 UTC b418f0df-28b8-497e-ac5d-a4b478911bd0 2012-05-01 08:36:38.8 UTC 8d4c37f0-a10b-465e-81aa-1c09938a3473 2012-05-01 08:37:47.922 UTC 24d62224-217d-46d0-a08a-06b0d60caec4 2012-05-02 07:59:24.107 UTC 0ad720e2-8bbd-4aed-96f5-756381173980 2012-04-24 12:19:06.97 UTC 517fa4a1-06ee-4bd7-980e-5f63e13c2fb2 2012-05-04 08:52:59.585 UTC 74b3d010-9e53-4df0-8513-43a9a1c30c86 2012-05-10 07:29:59.107 UTC 288673db-e11c-4f6a-be9c-57b0c212979d 2012-04-30 14:48:27.139 UTC 90744424-a1a0-4107-b358-5e931c677e4a 2012-05-01 08:35:44.460 UTC d56f22a8-96c1-4eb6-bf76-15cda0725ed8 2012-05-07 11:24:02.593 UTC 5d1ef777-4da0-4af7-abc1-938cbd13b687 2012-05-05 05:39:03.774 UTC 49621bfe-01ef-4491-9a3e-d65911feb2a6 2012-05-24 16:26:53.940 UTC 99b23eb4-ca64-4f27-b08c-bdf3864724e5 2012-05-05 05:33:41.165 UTC 2ee8114d-7999-4833-ba39-97ddb6ff067c 2012-05-03 15:43:09.120 UTC d1b49247-0c82-443c-acb1-bab1044296f4 2012-04-30 14:42:33.401 UTC Workflow20Sentinel00DummyOutText_constantvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity Ciao net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokemessage_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity MCMC numerical integration failed to converge. It is recommended to run MrBayes with more generations. net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketellmessage0title0net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity message 0 java.lang.String true title 0 java.lang.String true answer 0 0 tell VelocityTemplate false net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketitle_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity Convergence Failed net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketellmessagemessage_valuevaluetelltitletitle_valuevalueDummyOutText_constantvalue 6be543cf-0a7e-4305-b7fc-1efaee8b413c 2012-11-28 17:08:36.500 UTC 7a13a605-e452-4af0-bb33-cff662b89278 2012-11-28 17:12:13.145 UTC ac938b2a-fe53-450b-8315-fd10b043ea40 2012-11-28 17:07:09.459 UTC Workflow23GeoKS_XML00 output of the GeoKS_XML service. 2012-10-01 09:05:34.319 UTC <result><success>True</success><burnin>10</burnin><pvalues>0.1,0.4</pvalues></result> 2012-10-01 09:07:29.124 UTC Success "True" 2012-10-01 08:35:31.640 UTC the result is "True" if convergence test is successfull and nothing if not 2012-10-01 08:35:23.824 UTC Failure the result is "True" if convergence test failed and nothing if it succed 2012-10-01 08:35:52.967 UTC "True" 2012-10-01 08:35:57.135 UTC Pvalues [0.1] 2012-10-01 08:32:16.235 UTC List of probabilities (number between 0 and 1) that each single tree included in the evolutionary model is inferred in the same way in the different runs of the MCMCMC phylogenetic inference. Generally evolutionary model include only one tree parameter, in this case the list is composed of only one element. In other case the order of the pvalues match the order the label tree in the MrBayes output 2012-10-01 08:33:07.346 UTC Burnin 100 2012-10-01 08:37:07.968 UTC Is an integer that indicates how many of the initial samples from the MCMCMC calculation need to be discarded to approximate correctly the posterior distribution using the numerical sampling of the phylogenetic inference. 2012-10-01 08:37:34.736 UTC XPath_Servicexml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <result><success>True</success><burnin>10</burnin><pvalues>0.1,0.3</pvalues></result> result/success net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_2xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <result><success>True</success><burnin>10</burnin><pvalues>0.1,0.3</pvalues></result> result/failure net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_3xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <result><success>True</success><burnin>10</burnin><pvalues>0.1,0.3</pvalues></result> result/pvalues net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSplit_string_into_string_list_by_regular_expressionregex0string0split11net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity string 0 'text/plain' java.lang.String true regex 0 'text/plain' java.lang.String true split 1 l('text/plain') 1 workflow org.embl.ebi.escience.scuflworkers.java.SplitByRegex net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeregex_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity , net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_4xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <result><success>True</success><burnin>10</burnin><pvalues>0.1,0.3</pvalues></result> result/burnin net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Servicexml_textGeoKS_XMLXPath_Service_2xml_textGeoKS_XMLXPath_Service_3xml_textGeoKS_XMLSplit_string_into_string_list_by_regular_expressionregexregex_valuevalueSplit_string_into_string_list_by_regular_expressionstringXPath_Service_3nodelistXPath_Service_4xml_textGeoKS_XMLSuccessXPath_ServicenodelistFailureXPath_Service_2nodelistPvaluesSplit_string_into_string_list_by_regular_expressionsplitBurninXPath_Service_4nodelist 56c444d6-8047-44b4-b051-b35e888ec946 2012-10-01 08:33:28.157 UTC 55328719-02ba-4412-ace3-9f89eb885312 2012-10-01 08:37:35.251 UTC e0893a0a-af4a-43c1-920c-0ccbd2c611c1 2012-10-01 09:05:35.455 UTC 1ecb5fdb-8b84-4d1c-80e2-a0e83ba35b5f 2012-10-01 09:07:31.179 UTC Phylogenetic_inferenJobID00NexusFileName00URL_Output_file The output of the consensus service is a path were to obtain a zipped folder that includes all output from phylogenetic inference and the one of the consensus 2013-02-01 16:55:11.210 UTC GeoKS_Result <result><success>True</success><burnin>16</burnin><pvalues>0.962205</pvalues></result> 2013-02-01 16:18:24.577 UTC Restul of the GeoKS test of convergence. 2013-02-01 16:21:52.128 UTC convergence path to obtain the output file of program geoks 2013-02-01 16:51:20.3 UTC newickTree small xml with tag res with one or more tag tree each one with a body that contain a tree in netwick format. each tree represent the consensus for a given partition of group of partition in the same order that are cited in the nexus input file of mrbayes 2013-02-01 16:53:25.629 UTC <res><tree>(ADD09384_1_555_ADD09384:1.18452,ABY27676_1_453_ABY27676:0.16674,(ACM89220_1_657_ACM89220:0.16271,(ADJ82639_1_645_ADJ82639:0.15654,(ADW58631_1_657_ADW58631:0.00298,ADW58691_1_657_ADW58691:0.00584)1.00:0.07383)0.98:0.04988,(ADW61587_1_657_ADW61587:0.10163,(ADH12119_1_645_ADH12119:0.14993,ADQ21240_1_648_ADQ21240:0.15645)0.90:0.06174)0.89:0.07555,(AEC60810_1_657_AEC60810:0.13396,((AEE92862_1_657_AEE92862:0.00180,AEE92882_1_657_AEE92882:0.00294)0.93:0.01820,(AEE92860_1_648_AEE92860:0.00172,AEE92867_1_642_AEE92867:0.00260,AEE92861_1_633_AEE92861:0.00326)0.85:0.01568)1.00:0.18625)0.99:0.14972)0.63:0.13345);</tree></res> 2013-02-01 16:53:50.585 UTC xmlTest Result of the Posterior Predictive test. the XML gives the details of the bolback test and the different component of the ibrahim statistics 2013-02-01 16:17:02.64 UTC <res> <L description="Ibrahim statistics">423.122037352</L> <Ls description="Ibrahim statistics">428.606079329</Ls> <P description="Bolback statistics">1.0</P> <meanE description="Mean Expected Value of MaxLikelihood">-2627.87756007</meanE > <Mobs description="Observed MaxLikelihood">-3045.44353779</Mobs> <varSim description="Variance of Expected MaxLikelihood">4670.91274471</varSim> <ExpDist description="Distribution of ExpectedValue">-2589.20637194,-2639.19315086,-2648.73145729,-2610.52687863,-2585.58189766,-2659.38736705,-2574.18508073,-2723.33127804,-2704.75327374,-2631.32558631,-2552.5101582,-2703.39380494,-2667.13202763,-2651.50061539,-2569.28198383,-2626.62095931,-2617.76281875,-2572.57059545,-2709.19885221,-2688.46426288,-2637.69736502,-2670.66419513,-2696.07449828,-2655.07124413,-2647.79827494,-2604.91472976,-2534.24408297,-2583.34924816,-2668.87938323,-2740.57305901,-2530.11916167,-2562.9442791,-2685.41059003,-2633.56902122,-2578.83564307,-2658.37912818,-2677.44851934,-2652.06899557,-2663.63424658,-2469.63098045,-2596.01725813,-2576.9875296,-2591.27350833,-2527.44870379,-2715.68701201,-2579.27957802,-2697.29097232,-2653.00610636,-2523.66960289,-2655.8841772,-2738.57859993,-2705.53182443,-2684.40099097,-2753.99486914,-2642.32534055,-2615.3927742,-2631.21113197,-2742.02571906,-2634.42641856,-2531.52928978,-2584.85740825,-2698.68226298,-2531.43531149,-2746.77385677,-2701.02474243,-2582.30350573,-2700.11149286,-2420.65243487,-2607.17713434,-2661.51426589,-2650.16168222,-2647.65155726,-2588.47948607,-2630.75469861,-2497.64331913,-2530.25525188,-2615.65091658,-2727.78832928,-2698.71995068,-2594.46551089,-2686.27551492,-2572.56237886,-2689.25088172,-2573.35445443,-2713.22086611,-2583.46460149,-2628.94579908,-2435.58149796,-2651.07259891,-2627.98995835,-2654.27986508,-2575.08681898,-2605.36422889,-2612.01841594,-2776.62534019,-2630.16209443,-2532.75232406,-2478.6691404,-2629.15296535,-2557.65795904,-2606.9330103,-2676.16136514,-2637.71752968,-2574.30204479,-2647.04416783,-2677.9611039,-2589.79676102,-2629.41620838,-2697.8045608</ExpDist> </res> 2013-02-01 16:17:58.58 UTC Plot Result of the Posterior Predictive test. Histogram of the distribution of the complexities (log of sum of sites entropy or maximal possible loglikelihood score) of the simulated data using the posterior distribution parameters compared with observed data complexity. The 1-alpha high posterior density of the distribution show the region where simulate data complexity match the observed one. Larger observed complexity indicates model too simplistic, while the contrary indicates overparametrization of the model. 2013-02-01 16:14:07.751 UTC Call_Retrieve_MrBayesJobjobID0Output_Path00net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeCall_Retrieve_GeoKS_JobArgument0Name0Output_Path11GeoKS_Result22net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_three_stringsPath0Mode0Alpha0output00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity Mode 0 'text/plain' java.lang.String true Alpha 0 'text/plain' java.lang.String true Path 0 text/plain java.lang.String true output 0 0 workflow org.embl.ebi.escience.scuflworkers.java.StringConcat UserNameHere 2012-06-08 08:39:34.818 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeAsk_ConvergenceModevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity convergence net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeAsk_GeoKS_Servicevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity geoks_xml net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeShowWebPageURL0net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSplit_string_into_string_list_by_regular_expression_erase_laststring0regex0split11net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity string 0 'text/plain' java.lang.String true regex 0 'text/plain' java.lang.String true split 1 1 workflow org.embl.ebi.escience.scuflworkers.java.SplitByRegex UserNameHere 2012-05-07 06:30:23.453 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeString_constant_2_2_2value00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity / net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDownloadMRBayesOutputURL0net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeFileAddress_Spacervalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity / net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSplit_string_into_string_list_by_regular_expression_erase_last_2regex0string0split11net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity string 0 'text/plain' java.lang.String true regex 0 'text/plain' java.lang.String true split 1 1 workflow org.embl.ebi.escience.scuflworkers.java.SplitByRegex UserNameHere 2012-05-07 06:30:23.453 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_Stringstringlist1seperator0concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity stringlist 1 l('text/plain') java.lang.String true seperator 0 'text/plain' java.lang.String true concatenated 0 'text/plain' 0 workflow org.embl.ebi.escience.scuflworkers.java.StringListMerge net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_String_2stringlist1seperator0concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity stringlist 1 l('text/plain') java.lang.String true seperator 0 'text/plain' java.lang.String true concatenated 0 'text/plain' 0 workflow org.embl.ebi.escience.scuflworkers.java.StringListMerge net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeask_AlphaXGeoKSmessage0answer00net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity message 0 java.lang.String true title 0 java.lang.String true answer 0 0 ask VelocityTemplate false net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeAsk_Alphavalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity Choose the minimal probability value that the observed MCMC integration has converged (e.g. 0.1, 0.95) net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeCall_Retrieve_ConsensusTreeArgument0NewickTrees22Output_Path11net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeWorkflow31NewickString0net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeParsing_GeoKSGeoKS_XML0Burnin11Success11net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_two_stringsBurnin0PartArgument00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity Burnin 0 'text/plain' java.lang.String true PartArgument 0 0 workflow org.embl.ebi.escience.scuflworkers.java.StringConcat UserNameHere 2012-10-01 11:30:53.18 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_two_strings_2string20string10output00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity string1 0 'text/plain' java.lang.String true string2 0 'text/plain' java.lang.String true output 0 'text/plain' 0 workflow org.embl.ebi.escience.scuflworkers.java.StringConcat net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Servicexml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <res><tree>a</tree><tree>b</tree></res> res/tree net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokePosterioPredictiveTestName0Argument0XML_Report22net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMrBayesPPtestvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity MrBayesPPtest net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_Four_stringspathInputMrBayes0burninvalue0numberSample0nameRun0output00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity nameRun 0 'text/plain' java.lang.String true pathInputMrBayes 0 'text/plain' java.lang.String true numberSample 0 text/plain java.lang.String true burninvalue 0 text/plain java.lang.String true output 0 0 workflow org.embl.ebi.escience.scuflworkers.java.StringConcat UserNameHere 2012-11-22 15:44:01.483 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokecondition_checkercondition0pass_flags11fail_flags11 This service checks if the condition is "true" and if so outputs a value in the pass_flags list and leaves the fail_flags empty. If the condition is not true then the service outputs a value in the fail_flags list and leaves the pass_flags empty. 2011-11-15 09:59:22.100 UTC net.sf.taverna.t2.activitiesbeanshell-activity1.4net.sf.taverna.t2.activities.beanshell.BeanshellActivity condition 0 text/plain java.lang.String true pass_flags 1 1 fail_flags 1 1 workflow net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeWorkflow20Sentinel0net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeWorkflow20_2Sentinel0net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMakeHistogramXML0Alpha0plot22net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeask_PPTSizemessage0answer00net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity message 0 java.lang.String true title 0 java.lang.String true answer 0 0 ask VelocityTemplate false net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokemessage_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity Sample Size from the Posterior Distribution to test fit of model on Data net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeText_constantvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 0.05 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeCall_Retrieve_MrBayesJobjobIDJobIDCall_Retrieve_GeoKS_JobArgumentConcatenate_three_stringsoutputCall_Retrieve_GeoKS_JobNameAsk_GeoKS_ServicevalueConcatenate_three_stringsPathCall_Retrieve_MrBayesJobOutput_PathConcatenate_three_stringsModeAsk_ConvergenceModevalueConcatenate_three_stringsAlphaask_AlphaXGeoKSanswerShowWebPageURLMerge_String_List_to_a_StringconcatenatedSplit_string_into_string_list_by_regular_expression_erase_laststringCall_Retrieve_MrBayesJobOutput_PathSplit_string_into_string_list_by_regular_expression_erase_lastregexString_constant_2_2_2valueDownloadMRBayesOutputURLMerge_String_List_to_a_String_2concatenatedSplit_string_into_string_list_by_regular_expression_erase_last_2regexFileAddress_SpacervalueSplit_string_into_string_list_by_regular_expression_erase_last_2stringCall_Retrieve_GeoKS_JobOutput_PathMerge_String_List_to_a_StringstringlistSplit_string_into_string_list_by_regular_expression_erase_lastsplitMerge_String_List_to_a_StringseperatorString_constant_2_2_2valueMerge_String_List_to_a_String_2stringlistSplit_string_into_string_list_by_regular_expression_erase_last_2splitMerge_String_List_to_a_String_2seperatorFileAddress_Spacervalueask_AlphaXGeoKSmessageAsk_AlphavalueCall_Retrieve_ConsensusTreeArgumentConcatenate_two_strings_2outputWorkflow31NewickStringXPath_ServicenodelistParsing_GeoKSGeoKS_XMLCall_Retrieve_GeoKS_JobGeoKS_ResultConcatenate_two_stringsBurninParsing_GeoKSBurninConcatenate_two_strings_2string2Concatenate_two_stringsPartArgumentConcatenate_two_strings_2string1Call_Retrieve_MrBayesJobOutput_PathXPath_Servicexml_textCall_Retrieve_ConsensusTreeNewickTreesPosterioPredictiveTestNameMrBayesPPtestvaluePosterioPredictiveTestArgumentConcatenate_Four_stringsoutputConcatenate_Four_stringspathInputMrBayesCall_Retrieve_MrBayesJobOutput_PathConcatenate_Four_stringsburninvalueParsing_GeoKSBurninConcatenate_Four_stringsnumberSampleask_PPTSizeanswerConcatenate_Four_stringsnameRunNexusFileNamecondition_checkerconditionParsing_GeoKSSuccessWorkflow20Sentinelcondition_checkerpass_flagsWorkflow20_2Sentinelcondition_checkerfail_flagsMakeHistogramXMLPosterioPredictiveTestXML_ReportMakeHistogramAlphaText_constantvalueask_PPTSizemessagemessage_valuevalueURL_Output_fileCall_Retrieve_ConsensusTreeOutput_PathGeoKS_ResultCall_Retrieve_GeoKS_JobGeoKS_ResultconvergenceCall_Retrieve_GeoKS_JobOutput_PathnewickTreeCall_Retrieve_ConsensusTreeNewickTreesxmlTestPosterioPredictiveTestXML_ReportPlotMakeHistogramplot a578675c-5281-470b-a9c6-5cda2dc96e99 2013-01-30 22:51:08.196 UTC f9c891c3-c38d-4d19-bde5-17ede9b84cd4 2013-01-31 11:46:12.660 UTC 145158db-9889-47be-ad17-e0907c558310 2012-05-10 07:30:02.691 UTC 71d60b33-01b7-45f4-b35f-431a2275efb1 2013-02-18 15:53:36.279 UTC ae0d823a-0415-40ff-81c2-97b6fcaf6dc0 2012-09-27 14:27:42.360 UTC 13e17a4a-4643-4e7b-9927-9bd4c6c59aac 2012-05-04 17:41:18.866 UTC cb6364bb-1322-491f-94ae-29d7ccad4a47 2013-02-01 16:59:58.676 UTC saverio vicario giacinto donvito bachir balech 2013-02-01 15:00:22.266 UTC 614842a1-6ddb-4c35-9d9f-969e5da7619f 2012-09-27 13:48:47.807 UTC 3e0a9baa-6c9e-4835-ba1a-af88102c1c71 2013-02-19 15:39:23.154 UTC fc073daa-c6c4-4310-9b95-53362d175916 2013-02-18 15:22:04.38 UTC cb4c52fb-4491-490e-8935-2872e2a25c09 2012-12-17 20:53:14.82 UTC 158c7c7c-8ae6-425f-97a8-faec72212282 2013-02-19 13:58:51.337 UTC ff51bb66-2602-481a-82b4-7676456316df 2012-05-04 19:50:27.88 UTC 72355fee-027c-40cf-83dc-4688c049f480 2012-05-10 07:45:43.653 UTC 4e9ed3ca-87ce-4c1b-9f45-0d4235a79d5a 2012-09-21 14:38:51.392 UTC 3c86a854-b6f4-4069-99ba-516f27e58df1 2013-02-20 12:57:07.450 UTC 147bdfaa-2d8e-4634-af3d-5287c5e1bc93 2013-02-18 21:54:07.300 UTC bce05b28-e93a-478a-8e11-5b7421c236da 2012-09-27 13:56:16.135 UTC 12c1f28a-bea1-427d-b311-6718aa813bc8 2012-05-07 05:01:08.484 UTC a6fda157-6f40-456f-bd19-3a80975cb13c 2013-02-19 17:12:21.318 UTC 48a6027e-a36c-4e40-a39e-9e06ae14ba89 2013-02-18 15:19:38.341 UTC 50c020ff-f443-422a-abf5-e25d8b6b7ba5 2012-09-21 10:25:37.359 UTC 224735cc-6188-45b8-aee3-5ca3e155d91e 2012-09-27 13:43:00.883 UTC 0acad263-fe61-45b7-abd6-66b493be4166 2012-06-04 11:40:43.39 UTC fac047c9-1154-447b-b17d-e2de45211e1b 2013-02-19 15:43:09.787 UTC cb4c52fb-4491-490e-8935-2872e2a25c09 2013-01-17 15:05:59.451 UTC 2ed748c1-f20f-41b7-a426-1e1a3b52059c 2012-05-06 20:16:44.23 UTC e0a2fd90-6178-4d3c-abd0-f1badc8860bc 2013-02-18 17:11:09.734 UTC 654e704d-1e41-4b72-9933-c2ae0cf51922 2012-06-08 08:39:44.818 UTC 314feaef-2962-4ca1-b9d7-d3a6910ea7ec 2012-12-17 20:52:03.795 UTC 2b42be78-e780-4257-9c67-d2a51b8c4827 2012-05-05 05:26:39.935 UTC f2eec3d8-e7d3-475f-8785-fdadab1e2b99 2013-01-17 14:55:21.80 UTC 4c876aa9-7a31-45e1-87bd-bd7d53d8ec43 2012-10-01 10:12:35.502 UTC 98a761ed-d95c-4ceb-bbe0-33d869cb0cce 2012-10-01 14:41:20.67 UTC f6dfc090-2f2c-477b-807e-77451e50a763 2012-10-01 14:43:17.747 UTC 6e0a2723-70bf-4a15-b6c5-7600193dca5a 2012-09-21 10:41:50.255 UTC 4c571cdb-e311-423e-bf31-27496bb626a1 2012-09-21 14:59:52.390 UTC f2cf9ee0-2879-475b-a39d-8c991511ded9 2012-05-05 05:36:14.476 UTC 1a490476-5a3e-423c-b8ec-02b6e3c6cee7 2013-02-19 10:01:13.928 UTC 3149d816-5e8f-4c55-9019-1a16e770304a 2013-02-18 22:01:31.888 UTC cea94a2d-87c7-4e88-aeb8-4917cf0d5d79 2012-05-04 20:22:08.233 UTC 1467395a-4390-4d0c-94f8-eec457c1c510 2012-11-28 17:28:27.85 UTC c54ccc24-c297-47a6-91b2-759592b9553e 2012-09-21 10:50:08.42 UTC 37ec3cd4-9442-4c9a-aaa7-b42fab661cbf 2012-09-27 13:23:19.565 UTC 6e1fadda-86ac-4819-9055-f2f9b4529cd8 2012-05-05 05:26:04.315 UTC cba860ff-9ebd-40de-8547-6c3145656910 2012-10-01 14:09:52.466 UTC 0d861536-4a1d-48e9-ad10-c0cac7399b8b 2012-09-27 12:50:04.836 UTC 853af834-c55a-4f72-be8f-1b03ff20bd8f 2012-06-08 09:36:57.264 UTC 2e88e37f-3a55-4402-9e24-a31bbefbace3 2012-05-06 20:01:48.485 UTC 2a525328-2870-4779-9c2a-a220733ad02f 2012-05-07 11:24:21.300 UTC 22f0a2d4-62a1-4d69-82a9-89004438c407 2012-05-04 20:19:24.424 UTC aba185c1-c311-4ef9-a92d-b9a8ddd5304f 2012-05-10 07:45:12.499 UTC 725f4a9d-7d95-4352-ba92-0e9615df53d9 2012-11-22 15:52:00.494 UTC 2d7c8239-d18b-4173-89e6-712d06c61f51 2013-02-05 16:19:23.941 UTC 48e8950c-3739-4f2f-b32a-1e49cf0e9649 2013-02-18 17:03:06.336 UTC 1546a518-e55d-430a-a352-4ed36668950e 2013-02-01 16:55:16.742 UTC ffe5fb3f-cad4-4f60-bd77-776a19a37a27 2012-09-27 13:24:34.726 UTC 22e1cb1c-e82d-422a-a9f6-93cd3965662f 2012-09-27 13:27:39.302 UTC Phylogenetic inference with MrBayes and test of MCMC convergence (GEOKS) and fit of the model on the data (Posterior Predictive test) 2013-02-01 15:01:51.770 UTC 6b0bfd33-6495-4668-bf08-4e03f64658a3 2012-11-28 15:47:13.111 UTC c5d850c1-e111-42d2-ab76-bfd0af11f040 2012-06-08 08:32:43.388 UTC 01d42280-c0e3-49ef-879e-4cb375f539dc 2012-09-21 11:00:21.91 UTC 02bff899-ebc9-4edd-bc6b-d8074a66f141 2012-09-27 14:49:05.721 UTC be99edbc-d1f0-4577-9265-0adeb47aa560 2012-05-05 05:31:48.797 UTC 6ca01092-bc80-469f-a9ad-18e7d845208a 2013-02-19 10:18:45.174 UTC 3986bca4-3f44-4855-927c-c5792ede5e50 2012-05-05 05:33:43.971 UTC 62811f0c-70f7-4a4a-bc63-ff6c45c445ba 2012-05-06 19:42:35.26 UTC 501cffd4-34cb-4075-b2b1-39b06ac74d3d 2013-02-05 15:51:18.684 UTC 40699599-a001-42c0-8759-88aa266a0271 2012-09-27 14:47:53.418 UTC 91c502ab-7dbd-4946-9a79-275c218698ea 2012-09-27 12:52:22.945 UTC 1d74772a-ac74-4da8-bf09-2513241893b6 2013-02-01 15:01:52.115 UTC e397ca8c-9f58-4259-911b-f04e492e6449 2012-05-07 06:34:39.162 UTC 28dda23e-c7dc-4d44-ac20-86cff432f946 2012-05-07 11:33:56.157 UTC db82ef12-c7de-4ce1-b0b0-1a85d432884c 2013-01-31 12:42:53.95 UTC 92d8638e-e7d8-4de7-895c-a15bbf047874 2012-10-01 11:27:41.460 UTC a4033e8d-b19c-4187-84b6-15ffbaf2d805 2012-10-01 13:50:02.205 UTC 86a91296-5af0-4692-b7ba-d7d0365c7e97 2013-01-31 13:28:47.932 UTC 8991979f-867a-45d7-af9a-2b0e95e4b25c 2013-02-20 10:40:27.977 UTC 3a7e3210-62e4-4659-8cbc-cfe56e79b733 2012-11-30 12:47:45.295 UTC c2a6371c-aa82-4720-8901-ca21e64700a7 2012-10-01 11:08:06.43 UTC 43a9b22d-0fca-4ca5-817b-821670a43d5d 2012-10-01 10:20:14.331 UTC 832a8933-7d2e-4cf4-8757-1cc8c79170c9 2012-05-04 20:36:30.12 UTC 6b5b4660-45a4-4484-a012-1f591d68225e 2012-05-05 05:39:14.842 UTC 1221473d-5d8f-4bd1-ae73-73c16bbf8665 2012-10-01 11:34:27.628 UTC 92687a2d-c280-4e82-bfd8-0a36736b49ba 2012-05-04 20:15:14.403 UTC d5085302-3ecf-437c-9919-d736050878ac 2012-10-01 14:38:06.182 UTC 5f9c3a31-a651-4cc2-a544-78f5783f9908 2012-05-06 19:49:52.928 UTC 3534f209-570c-452a-8193-b5ffc9cabc72 2012-09-21 10:44:29.55 UTC a27cfd7f-7b45-43b4-8ccb-130cf0d9733a 2012-09-27 12:49:24.32 UTC 7b6d5741-adce-4f93-96d4-891441f374c3 2012-05-04 19:55:35.621 UTC d1e0cf97-9cb0-49e3-a551-a07517f38eae 2012-09-21 15:17:03.341 UTC 0de23bd7-a836-43aa-9d09-db059b20b545 2012-12-17 20:52:48.670 UTC 2cd3a593-21b6-4910-b425-9ecdb88279ec 2012-05-04 20:55:37.723 UTC c151347b-b345-4d9e-a8d5-54635ee41954 2013-02-19 15:32:23.552 UTC 1d45895c-3cd1-42bf-8006-2e72588110a0 2013-01-31 10:58:38.682 UTC 236ea769-4950-4cbc-a49c-50fbaff3289a 2013-02-18 17:16:35.103 UTC 0b674834-7e1a-4cbb-b036-b060fa321d4c 2012-08-31 14:07:32.782 UTC 47c9c213-e8fa-436c-a287-a83fc5208c6f 2013-01-18 14:36:21.222 UTC 595fa70e-f728-416d-b783-1b367a04fde7 2013-01-18 14:41:22.116 UTC 1be2f39f-ee9d-428d-87f4-c553ac861b8b 2012-09-27 13:12:32.717 UTC 595d22d9-a6b3-4e5a-9b46-50367a689d7e 2012-05-24 16:26:56.417 UTC 6eaa8577-af0a-40ba-abd4-96882b560b33 2012-09-27 13:06:49.941 UTC 84ce3b14-97fe-4304-bceb-9b4cd957c932 2012-05-07 09:21:22.516 UTC 148a5fd3-5119-422a-9787-7a0328c6b0f3 2012-09-21 15:04:35.216 UTC 47880dd0-388d-40e0-b60f-97149a7133de 2013-02-01 17:19:45.120 UTC 7e529d1f-daa7-48b0-a1fd-465d9c2d3792 2012-05-05 05:59:23.297 UTC 30d176de-d29b-466d-b9a5-6d28a4a2bc3c 2012-10-01 09:16:33.864 UTC Phylogenetic inference with MrBayes and NoGUI, test of MCMC convergence (GEOKS) and fit of the model on the data (Posterior Predictive test) 2013-02-05 16:19:21.451 UTC 31c4582c-7fbc-436f-808e-219c29dd543f 2013-02-18 16:23:22.79 UTC 86a8ff0b-b6b2-4195-aa27-78434bd71ce6 2013-01-30 22:29:37.592 UTC Workflow14Name00Argument00JobIDREST_Servicename0arguments0responseBody00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity GET http://alicegrid17.ba.infn.it:8080/INFN.Grid.FrontEnd/services/QueryJob/InsertJobs?NAME={name}&arguments={arguments} application/xml application/xml String false false false false true arguments java.lang.String name java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Servicexml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <Job><Name>blast</Name><Flag>7772590c-d7ab-4b76-98b9-aa293c6c34fe</Flag><JobsID><JobId>454118</JobId></JobsID></Job> /Job/JobsID/JobId net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_ServicenameNameREST_ServiceargumentsArgumentXPath_Servicexml_textREST_ServiceresponseBodyJobIDXPath_Servicenodelist 0b2a7cd3-3853-434d-b462-4a2d7796ea7d 2011-11-30 15:48:49.960 UTC 4afab38a-1fec-43b4-8a32-83eaa59e8b8d 2011-11-30 15:53:41.975 UTC a2b6b247-c946-4883-8d6d-469ea6573f93 2011-11-30 15:51:07.192 UTC a65689de-3539-4833-9e3e-c32aa9237d39 2011-11-30 15:52:17.202 UTC a3848c5b-b720-4bc7-8e8a-d0a4e305b43f 2012-04-02 16:09:05.883 UTC be8cd221-9345-4c91-9fb4-b413978b0a6a 2011-11-30 16:05:00.470 UTC 2bb836b5-2738-4f3f-864d-5a77e76bdd1f 2011-11-30 17:09:13.282 UTC 36001f84-a643-4173-80ee-118a0ceaecbc 2011-11-30 17:10:08.264 UTC b9cf606e-166f-471c-b51e-d2f517526ad1 2011-11-30 17:00:56.590 UTC 745b7346-e8be-4864-ba02-1ae1d255f50d 2012-04-05 09:28:59.571 UTC 0ca845f5-dbee-4c11-8b69-2843a6c7e40e 2012-05-03 15:26:02.481 UTC 15c52e11-e32b-46b2-857c-89226396dc45 2011-11-30 15:41:58.998 UTC 4cc9395d-b178-451b-aef7-a34678d0d490 2011-11-30 15:51:55.76 UTC bc601486-bec4-4b2c-a46e-ea71c6fab18e 2013-02-19 07:43:01.213 UTC e2682dca-1389-49ad-a886-491fa918d268 2011-11-30 15:54:01.684 UTC 8a70d234-45be-42bd-8bff-039af9b1c962 2011-11-30 16:26:18.954 UTC 97c8a203-1938-4e3f-90f3-87694c3a795a 2011-11-30 15:59:45.57 UTC eb0a0648-1196-4215-b698-acb8729bf045 2011-11-30 15:47:24.13 UTC bda5ff28-ff17-4ff2-9191-13acd55b73f3 2011-11-30 17:07:35.484 UTC 3aba8bc3-36ee-473d-a504-288a1f9998df 2011-11-30 16:07:49.591 UTC bcc60618-7449-4965-b39d-d0d6d90ec7db 2011-11-30 15:49:46.56 UTC 25d638c9-672c-498e-913b-4bceb4230f8e 2011-11-30 17:10:59.924 UTC 38b1f6f3-d29c-408a-9360-46930d61cff7 2012-05-04 09:55:44.596 UTC 3c9f8d96-0c37-4a18-8214-289acc1482fb 2011-11-30 16:02:25.713 UTC bed4b280-a552-4ad9-8bfe-54a2fabae11f 2012-04-05 09:41:33.486 UTC 7b7863ae-a026-4317-8084-9a00049fccf8 2012-04-05 11:23:09.57 UTC 857db6d7-3775-4738-bf94-5c6a78c1fb8b 2011-11-30 16:00:08.58 UTC 5f07e956-6857-4261-ae1e-1ab5ba32ab08 2011-11-30 16:07:05.176 UTC Workflow14Argument00StatusOutput_PathNewickTreesREST_Servicearguments0name0responseBody00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity GET http://alicegrid17.ba.infn.it:8080/INFN.Grid.FrontEnd/services/QueryJob/InsertJobs?NAME={name}&arguments={arguments} application/xml application/xml String false false false false true arguments java.lang.String name java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Servicexml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <Job><Name>blast</Name><Flag>7772590c-d7ab-4b76-98b9-aa293c6c34fe</Flag><JobsID><JobId>454118</JobId></JobsID></Job> /Job/JobsID/JobId net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeResultsRetrieving_ConsensusJobID0Status00Output00StandardOuput11net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop <activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns=""> <inputs> <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> <name>Status</name> <depth>0</depth> <translatedElementType>java.lang.String</translatedElementType> <allowsLiteralValues>true</allowsLiteralValues> </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> </inputs> <outputs> <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> <name>loop</name> <depth>0</depth> <granularDepth>0</granularDepth> </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> </outputs> <classLoaderSharing>workflow</classLoaderSharing> <localDependencies /> <artifactDependencies /> <script>loop = "" + ! Status.equals("done"); if ("true".matches(loop)) { Thread.sleep(5000); }</script> <dependencies /> </net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity> true net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeconsensus_xmlvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity consensus_xml net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_ServiceargumentsArgumentREST_Servicenameconsensus_xmlvalueXPath_Servicexml_textREST_ServiceresponseBodyResultsRetrieving_ConsensusJobIDXPath_ServicenodelistStatusResultsRetrieving_ConsensusStatusOutput_PathResultsRetrieving_ConsensusOutputNewickTreesResultsRetrieving_ConsensusStandardOuput 25d638c9-672c-498e-913b-4bceb4230f8e 2011-11-30 17:10:59.924 UTC 8a70d234-45be-42bd-8bff-039af9b1c962 2011-11-30 16:26:18.954 UTC be8cd221-9345-4c91-9fb4-b413978b0a6a 2011-11-30 16:05:00.470 UTC 3aba8bc3-36ee-473d-a504-288a1f9998df 2011-11-30 16:07:49.591 UTC a2b6b247-c946-4883-8d6d-469ea6573f93 2011-11-30 15:51:07.192 UTC bda5ff28-ff17-4ff2-9191-13acd55b73f3 2011-11-30 17:07:35.484 UTC 36001f84-a643-4173-80ee-118a0ceaecbc 2011-11-30 17:10:08.264 UTC 857db6d7-3775-4738-bf94-5c6a78c1fb8b 2011-11-30 16:00:08.58 UTC bcc60618-7449-4965-b39d-d0d6d90ec7db 2011-11-30 15:49:46.56 UTC 736db278-dce1-4fc7-bc82-4db29920f6b7 2012-10-01 14:31:19.648 UTC 5688bad2-fad3-4ffb-847b-f17902899809 2012-09-21 10:06:17.749 UTC b9cf606e-166f-471c-b51e-d2f517526ad1 2011-11-30 17:00:56.590 UTC 4cc9395d-b178-451b-aef7-a34678d0d490 2011-11-30 15:51:55.76 UTC a65689de-3539-4833-9e3e-c32aa9237d39 2011-11-30 15:52:17.202 UTC eb0a0648-1196-4215-b698-acb8729bf045 2011-11-30 15:47:24.13 UTC 7b7863ae-a026-4317-8084-9a00049fccf8 2012-04-05 11:23:09.57 UTC 2bb836b5-2738-4f3f-864d-5a77e76bdd1f 2011-11-30 17:09:13.282 UTC cd9f15fa-0819-4ddd-b6ab-6778ac424da1 2012-06-08 09:36:42.175 UTC 4afab38a-1fec-43b4-8a32-83eaa59e8b8d 2011-11-30 15:53:41.975 UTC 5f07e956-6857-4261-ae1e-1ab5ba32ab08 2011-11-30 16:07:05.176 UTC 97c8a203-1938-4e3f-90f3-87694c3a795a 2011-11-30 15:59:45.57 UTC 0ca845f5-dbee-4c11-8b69-2843a6c7e40e 2012-05-03 15:26:02.481 UTC a3848c5b-b720-4bc7-8e8a-d0a4e305b43f 2012-04-02 16:09:05.883 UTC 745b7346-e8be-4864-ba02-1ae1d255f50d 2012-04-05 09:28:59.571 UTC e2682dca-1389-49ad-a886-491fa918d268 2011-11-30 15:54:01.684 UTC 3c9f8d96-0c37-4a18-8214-289acc1482fb 2011-11-30 16:02:25.713 UTC 0b2a7cd3-3853-434d-b462-4a2d7796ea7d 2011-11-30 15:48:49.960 UTC 38b1f6f3-d29c-408a-9360-46930d61cff7 2012-05-04 09:55:44.596 UTC bed4b280-a552-4ad9-8bfe-54a2fabae11f 2012-04-05 09:41:33.486 UTC 172155eb-f362-4e26-a727-3dadee48b001 2012-06-08 08:32:03.597 UTC 03dca5b4-05db-47ed-9c8c-69551b1653e8 2012-09-21 14:59:11.614 UTC 15c52e11-e32b-46b2-857c-89226396dc45 2011-11-30 15:41:58.998 UTC Workflow58XML00Alpha00plotXPath_GetMobsxml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <res> <L description="Ibrahim statistics">560.17351799</L> <Ls description="Ibrahim statistics">562.48875169</Ls> <P description="Bolback statistics">1.0</P> <meanE description="Mean Expected Value of MaxLikelihood">-2487.59486231</meanE> <Mobs description="Observed MaxLikelihood">-3045.44353779</Mobs> <varSim description="Variance of Expected MaxLikelihood">2599.22552032</varSim> <ExpDist description="Distribution of ExpectedValue">-2545.10145352,-2500.95810231,-2442.56948888,-2498.56742024,-2540.52928529,-2511.49928679,-2481.24725226,-2565.33590629,-2527.35979864,-2528.77843991,-2574.53811789,-2542.50255524,-2518.1121729,-2534.12470635,-2518.06956701,-2468.98428724,-2486.31836196,-2501.54349341,-2461.83001023,-2434.3541003,-2445.94780041,-2400.38795875,-2481.46643387,-2429.57077012,-2442.36215456,-2487.88521758,-2490.9338774,-2529.63620824,-2469.00216264,-2476.00983282,-2504.01178495,-2433.88739457,-2459.22626827,-2561.05471573,-2559.34555071,-2451.93144624,-2473.35887376,-2453.85171868,-2524.16584433,-2512.1622393,-2458.33378514,-2525.837285,-2526.12438521,-2485.01486334,-2517.23019559,-2528.44443775,-2483.36146749,-2551.95670143,-2591.67335125,-2563.71580117,-2470.60536163,-2580.42301232,-2509.02170908,-2561.28094698,-2538.87027386,-2487.61672819,-2518.72340597,-2606.48241616,-2598.33612607,-2480.57542072,-2484.43513381,-2550.26247542,-2546.04323983,-2439.76964487,-2494.60582878,-2475.34733448,-2487.685282,-2486.91672038,-2537.73467953,-2538.34309731,-2514.31895584,-2568.34953864,-2495.25870749,-2516.65974837,-2545.36654386,-2536.28570687,-2517.75297184,-2555.22762223,-2501.30871429,-2493.06388914,-2565.90758868,-2573.07355299,-2432.86041819,-2566.66402588,-2590.92156393,-2486.14313081,-2541.88192913,-2521.18516009,-2381.11892549,-2395.2493196,-2485.86230296,-2534.93158957,-2420.57168208,-2449.65529399,-2447.78801144,-2416.5728436,-2471.94780254,-2398.68208789,-2453.12354218,-2456.11875813,-2539.18842381,-2554.29021524,-2473.47025096,-2526.39310585,-2496.61899383,-2444.98203085,-2522.49989927,-2556.99484282,-2497.11556723,-2451.61910509,-2470.42872574,-2491.71855106,-2511.0557411,-2415.45160353,-2466.78742266,-2433.41962199,-2441.34094632,-2414.03716338,-2532.25829475,-2474.20437926,-2537.37629086,-2531.03537956,-2537.74177161,-2543.25723382,-2544.65864075,-2559.61043862,-2545.3513958,-2528.86544446,-2445.42702413,-2479.83792825,-2461.06113609,-2454.91664063,-2526.82115096,-2472.01109828,-2489.95056707,-2502.31825399,-2492.87813824,-2425.7594473,-2521.60060694,-2478.73217616,-2521.934063,-2439.82579738,-2463.08097066,-2525.22806219,-2526.0536128,-2595.21154185,-2524.68973764,-2511.25738577,-2477.77431862,-2475.28727437,-2453.49852067,-2460.41552627,-2486.23350849,-2441.14387342,-2494.61341483,-2479.04473446,-2538.05809134,-2457.24077197,-2510.01436454,-2501.80323681,-2484.89131953,-2444.22784218,-2419.29806234,-2452.89653134,-2490.36649891,-2468.21053153,-2465.0561625,-2531.88996997,-2522.54112927,-2524.42125481,-2522.04481467,-2547.94345771,-2596.00208335,-2440.4755688,-2501.2767551,-2506.77754269,-2448.69391838,-2461.63596104,-2506.71901317,-2497.32219064,-2478.7546814,-2476.57750446,-2436.99379297,-2449.90164826,-2586.19232796,-2556.91651824,-2533.66418714,-2467.30782191,-2486.5772141,-2497.27856485,-2456.92264479,-2504.92500794,-2523.62297636,-2476.02563056,-2509.91989435,-2554.17254763,-2466.76174882,-2511.53880475,-2495.98867774,-2464.62461722,-2455.13726678,-2401.21488602,-2439.54813789,-2448.88885964,-2498.70584877,-2549.45699572,-2555.79638541,-2458.87409229,-2439.72956179,-2529.25601151,-2522.85438885,-2472.46983076,-2465.85022,-2443.42470199,-2476.77508681,-2519.49459995,-2478.27160535,-2445.54684724,-2458.86653701,-2574.15240007,-2650.96118753,-2551.45316358,-2529.27079348,-2551.90261483,-2528.73758822,-2539.13599773,-2509.75371836,-2467.11665577,-2487.85930543,-2502.58556266,-2432.52793386,-2420.19081673,-2460.55396826,-2461.08910918,-2476.00645033,-2490.93946671,-2503.92404806,-2558.06183406,-2596.89396159,-2593.34633843,-2567.47542446,-2600.3756445,-2598.52074632,-2563.26105028,-2576.10197268,-2592.36840244,-2584.70543871,-2524.17926978,-2510.05331696,-2580.03564323,-2557.97699771,-2631.31919685,-2515.95918539,-2591.78343492,-2465.3295943,-2440.71643795,-2514.69195273,-2534.84498553,-2488.4003888,-2475.65337842,-2486.54551639,-2420.02975815,-2476.32553518,-2533.13078021,-2484.97406728,-2522.85466219,-2483.95926386,-2513.14489695,-2497.92895468,-2485.8752682,-2533.09889475,-2383.89679243,-2375.2358318,-2432.66122926,-2558.43722822,-2450.95698114,-2480.14249389,-2565.37460543,-2408.95352046,-2606.21107303,-2571.81578983,-2528.90923035,-2526.47860216,-2484.23443829,-2545.36927041,-2509.18725047,-2534.30382493,-2501.23606012,-2461.92992448,-2430.29046799,-2451.60268748,-2578.97324191,-2418.63408319,-2454.40683073,-2447.23479251,-2569.46087068,-2537.55033275,-2573.20804696,-2578.09528222,-2468.44528791,-2505.3876049,-2532.09111948,-2571.42094979,-2578.1508859,-2607.62401817,-2523.615534,-2397.3281278,-2384.441422,-2395.72218231,-2460.58045497,-2501.32539311,-2530.75049719,-2478.80287072,-2500.34633671,-2516.81955199,-2466.31461256,-2418.00017964,-2474.02073791,-2482.18822226,-2537.12643526,-2473.90591748,-2476.98051777,-2549.36942037,-2419.53936823,-2486.98005747,-2546.8529005,-2540.70806901,-2523.15136349,-2436.45440783,-2473.43959611,-2423.26874195,-2416.4239088,-2512.83931071,-2490.14065261,-2490.28883136,-2474.14582183,-2524.6115064,-2497.50581262,-2508.20578948,-2528.81074244,-2536.37783246,-2527.25865195,-2468.53407207,-2553.66216363,-2554.08106737,-2499.74573389,-2508.10298636,-2494.53010959,-2430.28632834,-2487.52654994,-2495.68701639,-2482.32730423,-2499.37039495,-2495.21219022,-2453.14398638,-2447.11134065,-2483.67633115,-2467.47172168,-2465.07993384,-2451.78071723,-2505.17933525,-2489.96179539,-2536.76771359,-2479.3843836,-2489.89421934,-2517.88757666,-2596.86027647,-2503.6962318,-2357.19134688,-2414.72795706,-2368.57068254,-2406.25611162,-2429.63768113,-2419.1904286,-2373.11038911,-2361.51222253,-2354.42163408,-2490.68787503,-2468.82405673,-2459.88176815,-2511.91424058,-2513.84188118,-2455.83883486,-2455.27454823,-2437.41805029,-2527.76427895,-2560.11922426,-2501.83856639,-2604.17153062,-2508.41322657,-2393.26815448,-2468.35358532,-2520.05683376,-2441.14097422,-2434.93437932,-2478.36687531,-2484.16905903,-2386.34228718,-2445.95308715,-2452.1873777,-2462.06242221,-2385.62336691,-2520.0388825,-2447.84371024,-2368.46898954,-2462.67808933,-2443.36035987,-2431.80233419,-2440.69677928,-2356.34964131,-2458.14972105,-2505.82614712,-2508.32465106,-2414.64781219,-2463.69233977,-2486.52662212,-2512.97291586,-2515.86422595,-2581.1038181,-2497.59349058,-2464.80755839,-2589.25593966,-2462.35518354,-2457.49728683,-2476.9990019,-2472.81324964,-2464.71927884,-2469.58427363,-2477.68426737,-2442.2577632,-2505.41524053,-2491.21199209,-2485.86727659,-2511.25533121,-2471.97033217,-2399.43695006,-2484.61951527,-2408.34891705,-2475.11340418,-2500.61591251,-2515.18185029,-2504.55287795,-2466.39637834,-2404.66981499,-2411.95083691,-2429.48869749,-2459.44903274,-2439.21263916,-2513.37412955,-2478.74914154,-2546.85153691,-2529.29142257,-2437.84677497,-2454.66400533,-2489.21051332,-2474.72693787,-2448.51820796,-2454.1912826,-2506.95057896,-2530.36959551,-2591.04758021,-2499.14858885,-2490.29736062,-2510.13534562,-2484.72710963,-2512.93995963,-2497.17542895,-2556.47266431,-2471.14523021,-2522.48313964,-2514.33757908,-2513.65997027,-2563.08201543,-2523.60923016,-2450.40987462,-2494.49724311,-2508.82257404,-2406.51912592,-2538.54041313,-2533.2971915,-2506.46594412,-2539.97439659,-2438.57253434,-2510.03750253,-2595.00072661,-2556.6582241,-2494.3717171,-2422.46713064,-2428.81680755,-2457.44769877,-2491.91025525,-2535.47768053,-2573.7995941,-2535.20254767,-2536.56532641,-2477.74411907,-2430.14620941,-2461.24031813,-2424.98885758,-2558.40120182,-2572.28928831,-2528.53827645,-2520.75464962,-2468.52035722,-2464.89714396,-2548.40343439,-2460.32615667,-2445.58653738,-2408.72489095,-2453.19815548,-2445.67381795,-2486.98841766,-2469.36204579,-2496.35139201,-2415.7645788,-2454.91280182,-2465.6298377,-2550.06247695,-2478.23120701,-2524.00274323,-2486.30688321,-2375.68491997,-2578.94655519,-2578.93611204,-2455.26144143,-2494.88347961,-2637.0818495,-2613.21203463,-2562.14057023,-2432.63729081,-2597.54187791,-2537.96973882,-2484.15103212,-2456.83283627,-2401.45538884,-2454.74124711,-2453.60131009,-2437.61069392,-2476.78658212,-2477.68788345,-2497.75104857,-2550.84733998,-2537.70008236,-2496.17806342,-2530.27895784,-2516.29110774,-2484.8853048,-2524.73088874,-2500.44567073,-2512.14403351,-2551.5252909,-2579.05627594,-2455.56908387,-2608.68647224,-2474.60059913,-2511.11478997,-2456.75400465,-2468.99036584,-2438.81838547,-2361.89255948,-2497.62173281,-2461.95358206,-2510.87077542,-2443.61400505,-2472.25469086,-2527.0823931,-2546.09611144,-2492.39550911,-2531.87351758,-2485.62078613,-2459.84584956,-2474.92718893,-2512.08205916,-2530.59721678,-2485.66824152,-2522.29715838,-2522.37043508,-2506.17825181,-2547.6225875,-2520.47295984,-2422.09276946,-2410.33110999,-2422.91397344,-2435.30808804,-2476.01212773,-2514.67017225,-2414.67877923,-2488.96933135,-2476.61991697,-2455.96597916,-2465.98093127,-2591.54598285,-2441.80128057,-2546.17244709,-2560.85744256,-2617.34647237,-2556.27072668,-2472.75350296,-2512.20752842,-2411.35648934,-2441.40462975,-2443.69535168,-2490.11992207,-2478.88124124,-2477.08073869,-2461.3760433,-2469.48419653,-2438.11492307,-2457.91020371,-2430.51015409,-2440.52885782,-2537.91146934,-2533.787834,-2363.85644794,-2485.59435518,-2534.9831693,-2493.87159418,-2527.22700495,-2555.47432608,-2478.88166445,-2461.44309982,-2510.8439427,-2447.96609401,-2570.03444329,-2511.95918886,-2593.45802705,-2486.32093033,-2436.7261637,-2470.16324505,-2423.07756442,-2365.17653105,-2505.67405413,-2509.22077182,-2426.01488694,-2455.33711112,-2455.86906633,-2505.28971328,-2497.17328827,-2476.65480937,-2486.01635237,-2427.25984328,-2479.74692428,-2388.86533986,-2492.85496212,-2443.47578612,-2430.49830569,-2450.78546788,-2391.78928931,-2516.75300518,-2409.54303257,-2509.92751359,-2465.66277656,-2500.50194032,-2520.64263539,-2455.9826754,-2468.19485049,-2452.03028678,-2412.88725311,-2431.58419377,-2533.0657227,-2483.12741208,-2385.87072493,-2518.64017082,-2533.51437678,-2513.1031804,-2532.87040615,-2512.44034533,-2389.50046032,-2474.43389704,-2454.60583007,-2469.15970455,-2444.20627894,-2433.6938547,-2421.04356195,-2508.32462656,-2538.88942693,-2513.92981018,-2504.92228175,-2509.16245093,-2545.70458565,-2493.50843221,-2529.32983377,-2452.24728446,-2485.84353921,-2496.35345972,-2453.18748063,-2495.81383006,-2437.13500108,-2471.21235879,-2540.0263853,-2453.72960505,-2442.27893215,-2410.18276084,-2409.14071148,-2470.45767957,-2486.35835798,-2463.31597433,-2527.48690965,-2546.80679793,-2468.54729064,-2383.5545052,-2482.97208603,-2505.50251633,-2461.2260443,-2487.86550936,-2429.50040202,-2447.21300811,-2386.06191344,-2506.690641,-2512.85211355,-2414.24286319,-2398.31868359,-2413.68715096,-2439.91525751,-2454.2738079,-2407.97700194,-2424.59655123,-2488.95781803,-2483.42266966,-2421.12337157,-2456.65301213,-2500.3790121,-2537.38701796,-2532.58643918,-2561.98158566,-2483.55018302,-2479.69976271,-2506.89450432,-2417.82453995,-2517.93399131,-2527.25140127,-2400.93974332,-2422.45151615,-2438.56110025,-2425.99954168,-2433.10692246,-2449.97833121,-2423.49535963,-2503.54367899,-2488.79518654,-2465.18479459,-2407.6682732,-2468.98152422,-2475.45791333,-2542.31572703,-2560.32455806,-2521.24728322,-2462.82540433,-2481.56671194,-2506.28526568,-2506.04659068,-2449.97262872,-2496.37900038,-2451.04972657,-2465.40485955,-2413.33938581,-2452.65279922,-2540.92971589,-2550.73437022,-2534.31451208,-2507.85468288,-2491.25923394,-2513.70213634,-2439.22085861,-2559.78940809,-2528.55023204,-2474.25225569,-2407.24654648,-2413.16821093,-2575.2340738,-2453.58254551,-2439.16916565,-2552.61683053,-2411.06824599,-2527.17471756,-2503.76102703,-2543.44401411,-2525.91540567,-2472.54386016,-2475.40335113,-2487.86018123,-2478.33664909,-2505.97045542,-2533.01056562,-2518.17705991,-2570.63064765,-2560.97202136,-2436.01238491,-2435.69580047,-2445.79811031,-2519.45978112,-2550.55861678,-2490.07742146,-2549.86490664,-2531.75531583,-2548.80099182,-2400.37242458,-2527.95936785,-2494.89628293,-2402.01462293,-2418.30613147,-2361.89280431,-2418.74238247,-2421.4470176,-2486.52403477,-2526.08253908,-2521.5387355,-2539.3969734,-2466.27987123,-2652.79010266,-2605.56347545,-2478.59964416,-2449.48658943,-2472.25530882,-2453.30533227,-2421.68591217,-2424.07288446,-2448.59363831,-2470.18937536,-2476.64993813,-2461.61617167,-2517.54701181,-2433.04603538,-2482.8829542,-2455.29111671,-2456.86165038,-2423.74369098,-2474.7800003,-2463.35266532,-2555.52221339,-2499.17622197,-2420.13682668,-2531.9508235,-2492.84763939,-2449.72224751,-2436.85318151,-2469.41165018,-2560.31888403,-2525.98016427,-2583.27722698,-2455.76361951,-2504.05213873,-2407.08527501,-2467.15947609,-2452.66780169,-2433.69953238,-2516.27951989,-2360.55243925,-2486.19167847,-2463.24045584,-2455.91124287,-2524.43858978,-2531.10204249,-2500.97983426,-2547.51445905,-2482.33608132,-2460.17897312,-2480.30845485,-2471.113858,-2494.58072678,-2431.63275978,-2414.503766,-2486.69438316,-2506.6974534,-2463.02136377,-2481.68352864,-2454.67240057,-2506.6717012,-2534.5439288,-2484.12598467,-2534.44317071,-2472.1151782,-2517.15146122,-2483.75779087,-2455.10891347,-2557.51179824,-2530.93929079,-2516.13697828,-2429.0785652,-2465.24966433,-2482.16755046,-2471.48771987,-2425.40555054,-2423.54440309,-2460.31123266,-2467.84744469,-2443.6381426,-2404.60013436,-2416.04622035,-2405.88305298,-2437.63666454,-2431.84339254,-2433.74835969,-2463.61915345,-2528.59481909,-2462.66076974,-2396.73864345,-2498.21299101,-2423.20322792,-2516.49664485,-2538.25603404,-2535.52138996,-2567.00392322,-2458.01761324,-2439.16766569,-2436.57948273,-2416.26500154,-2413.19050315,-2486.44550472,-2524.56880531,-2516.26058597,-2427.7085173,-2459.26005484,-2475.81106752,-2435.86815889,-2413.62490511,-2420.26170908,-2406.72464948,-2528.06562383,-2516.43892908,-2497.36701493,-2491.29632155,-2484.97124101,-2445.24579623,-2459.06731147,-2529.087401,-2444.42543231,-2431.6852675,-2387.25982493,-2409.55729159,-2495.29990777,-2531.74057507,-2505.81624689,-2451.67612038,-2418.11052161,-2408.08213852,-2484.19478355,-2540.38362094,-2580.67225372,-2581.5233847,-2502.62093583,-2512.5282092,-2554.77255674,-2518.83494813,-2386.42604402,-2601.3018944,-2549.32537659,-2513.23016016,-2527.72944686,-2471.1587536,-2518.46837895,-2541.57266369,-2535.76622707,-2449.07142571,-2459.26398073,-2425.44315942,-2484.3419871,-2524.04635559,-2431.83543982,-2479.77142621,-2510.63358103,-2451.44827688,-2493.0791946,-2474.43078315,-2493.96349608,-2433.57297756,-2445.16041256,-2465.62348915,-2474.55229627,-2437.64062336,-2495.3965133,-2469.08970849,-2498.8039801,-2489.50514295,-2465.28350724,-2510.89869627,-2410.65530673,-2486.75087407,-2562.89417541,-2545.28264159,-2454.40810344,-2471.63661323,-2513.93919385,-2427.87368767,-2485.06120666,-2474.784058,-2512.22481961</ExpDist> </res> /res/Mobs net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeRshell_MakeHistogramMobs0ExpDist0Alpha0myplot00net.sf.taverna.t2.activitiesrshell-activity1.4net.sf.taverna.t2.activities.rshell.RshellActivity Mobs 0 false ExpDist 0 false Alpha 0 false myplot 0 0 false localhost 6311 false false Mobs DOUBLE ExpDist STRING Alpha DOUBLE myplot PNG_FILE net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_getExpDistxml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity <?xml version="1.0" encoding="UTF-8"?> <res> <L description="Ibrahim statistics">560.17351799</L> <Ls description="Ibrahim statistics">562.48875169</Ls> <P description="Bolback statistics">1.0</P> <meanE description="Mean Expected Value of MaxLikelihood">-2487.59486231</meanE> <Mobs description="Observed MaxLikelihood">-3045.44353779</Mobs> <varSim description="Variance of Expected MaxLikelihood">2599.22552032</varSim> <ExpDist description="Distribution of ExpectedValue">-2545.10145352,-2500.95810231,-2442.56948888,-2498.56742024,-2540.52928529,-2511.49928679,-2481.24725226,-2565.33590629,-2527.35979864,-2528.77843991,-2574.53811789,-2542.50255524,-2518.1121729,-2534.12470635,-2518.06956701,-2468.98428724,-2486.31836196,-2501.54349341,-2461.83001023,-2434.3541003,-2445.94780041,-2400.38795875,-2481.46643387,-2429.57077012,-2442.36215456,-2487.88521758,-2490.9338774,-2529.63620824,-2469.00216264,-2476.00983282,-2504.01178495,-2433.88739457,-2459.22626827,-2561.05471573,-2559.34555071,-2451.93144624,-2473.35887376,-2453.85171868,-2524.16584433,-2512.1622393,-2458.33378514,-2525.837285,-2526.12438521,-2485.01486334,-2517.23019559,-2528.44443775,-2483.36146749,-2551.95670143,-2591.67335125,-2563.71580117,-2470.60536163,-2580.42301232,-2509.02170908,-2561.28094698,-2538.87027386,-2487.61672819,-2518.72340597,-2606.48241616,-2598.33612607,-2480.57542072,-2484.43513381,-2550.26247542,-2546.04323983,-2439.76964487,-2494.60582878,-2475.34733448,-2487.685282,-2486.91672038,-2537.73467953,-2538.34309731,-2514.31895584,-2568.34953864,-2495.25870749,-2516.65974837,-2545.36654386,-2536.28570687,-2517.75297184,-2555.22762223,-2501.30871429,-2493.06388914,-2565.90758868,-2573.07355299,-2432.86041819,-2566.66402588,-2590.92156393,-2486.14313081,-2541.88192913,-2521.18516009,-2381.11892549,-2395.2493196,-2485.86230296,-2534.93158957,-2420.57168208,-2449.65529399,-2447.78801144,-2416.5728436,-2471.94780254,-2398.68208789,-2453.12354218,-2456.11875813,-2539.18842381,-2554.29021524,-2473.47025096,-2526.39310585,-2496.61899383,-2444.98203085,-2522.49989927,-2556.99484282,-2497.11556723,-2451.61910509,-2470.42872574,-2491.71855106,-2511.0557411,-2415.45160353,-2466.78742266,-2433.41962199,-2441.34094632,-2414.03716338,-2532.25829475,-2474.20437926,-2537.37629086,-2531.03537956,-2537.74177161,-2543.25723382,-2544.65864075,-2559.61043862,-2545.3513958,-2528.86544446,-2445.42702413,-2479.83792825,-2461.06113609,-2454.91664063,-2526.82115096,-2472.01109828,-2489.95056707,-2502.31825399,-2492.87813824,-2425.7594473,-2521.60060694,-2478.73217616,-2521.934063,-2439.82579738,-2463.08097066,-2525.22806219,-2526.0536128,-2595.21154185,-2524.68973764,-2511.25738577,-2477.77431862,-2475.28727437,-2453.49852067,-2460.41552627,-2486.23350849,-2441.14387342,-2494.61341483,-2479.04473446,-2538.05809134,-2457.24077197,-2510.01436454,-2501.80323681,-2484.89131953,-2444.22784218,-2419.29806234,-2452.89653134,-2490.36649891,-2468.21053153,-2465.0561625,-2531.88996997,-2522.54112927,-2524.42125481,-2522.04481467,-2547.94345771,-2596.00208335,-2440.4755688,-2501.2767551,-2506.77754269,-2448.69391838,-2461.63596104,-2506.71901317,-2497.32219064,-2478.7546814,-2476.57750446,-2436.99379297,-2449.90164826,-2586.19232796,-2556.91651824,-2533.66418714,-2467.30782191,-2486.5772141,-2497.27856485,-2456.92264479,-2504.92500794,-2523.62297636,-2476.02563056,-2509.91989435,-2554.17254763,-2466.76174882,-2511.53880475,-2495.98867774,-2464.62461722,-2455.13726678,-2401.21488602,-2439.54813789,-2448.88885964,-2498.70584877,-2549.45699572,-2555.79638541,-2458.87409229,-2439.72956179,-2529.25601151,-2522.85438885,-2472.46983076,-2465.85022,-2443.42470199,-2476.77508681,-2519.49459995,-2478.27160535,-2445.54684724,-2458.86653701,-2574.15240007,-2650.96118753,-2551.45316358,-2529.27079348,-2551.90261483,-2528.73758822,-2539.13599773,-2509.75371836,-2467.11665577,-2487.85930543,-2502.58556266,-2432.52793386,-2420.19081673,-2460.55396826,-2461.08910918,-2476.00645033,-2490.93946671,-2503.92404806,-2558.06183406,-2596.89396159,-2593.34633843,-2567.47542446,-2600.3756445,-2598.52074632,-2563.26105028,-2576.10197268,-2592.36840244,-2584.70543871,-2524.17926978,-2510.05331696,-2580.03564323,-2557.97699771,-2631.31919685,-2515.95918539,-2591.78343492,-2465.3295943,-2440.71643795,-2514.69195273,-2534.84498553,-2488.4003888,-2475.65337842,-2486.54551639,-2420.02975815,-2476.32553518,-2533.13078021,-2484.97406728,-2522.85466219,-2483.95926386,-2513.14489695,-2497.92895468,-2485.8752682,-2533.09889475,-2383.89679243,-2375.2358318,-2432.66122926,-2558.43722822,-2450.95698114,-2480.14249389,-2565.37460543,-2408.95352046,-2606.21107303,-2571.81578983,-2528.90923035,-2526.47860216,-2484.23443829,-2545.36927041,-2509.18725047,-2534.30382493,-2501.23606012,-2461.92992448,-2430.29046799,-2451.60268748,-2578.97324191,-2418.63408319,-2454.40683073,-2447.23479251,-2569.46087068,-2537.55033275,-2573.20804696,-2578.09528222,-2468.44528791,-2505.3876049,-2532.09111948,-2571.42094979,-2578.1508859,-2607.62401817,-2523.615534,-2397.3281278,-2384.441422,-2395.72218231,-2460.58045497,-2501.32539311,-2530.75049719,-2478.80287072,-2500.34633671,-2516.81955199,-2466.31461256,-2418.00017964,-2474.02073791,-2482.18822226,-2537.12643526,-2473.90591748,-2476.98051777,-2549.36942037,-2419.53936823,-2486.98005747,-2546.8529005,-2540.70806901,-2523.15136349,-2436.45440783,-2473.43959611,-2423.26874195,-2416.4239088,-2512.83931071,-2490.14065261,-2490.28883136,-2474.14582183,-2524.6115064,-2497.50581262,-2508.20578948,-2528.81074244,-2536.37783246,-2527.25865195,-2468.53407207,-2553.66216363,-2554.08106737,-2499.74573389,-2508.10298636,-2494.53010959,-2430.28632834,-2487.52654994,-2495.68701639,-2482.32730423,-2499.37039495,-2495.21219022,-2453.14398638,-2447.11134065,-2483.67633115,-2467.47172168,-2465.07993384,-2451.78071723,-2505.17933525,-2489.96179539,-2536.76771359,-2479.3843836,-2489.89421934,-2517.88757666,-2596.86027647,-2503.6962318,-2357.19134688,-2414.72795706,-2368.57068254,-2406.25611162,-2429.63768113,-2419.1904286,-2373.11038911,-2361.51222253,-2354.42163408,-2490.68787503,-2468.82405673,-2459.88176815,-2511.91424058,-2513.84188118,-2455.83883486,-2455.27454823,-2437.41805029,-2527.76427895,-2560.11922426,-2501.83856639,-2604.17153062,-2508.41322657,-2393.26815448,-2468.35358532,-2520.05683376,-2441.14097422,-2434.93437932,-2478.36687531,-2484.16905903,-2386.34228718,-2445.95308715,-2452.1873777,-2462.06242221,-2385.62336691,-2520.0388825,-2447.84371024,-2368.46898954,-2462.67808933,-2443.36035987,-2431.80233419,-2440.69677928,-2356.34964131,-2458.14972105,-2505.82614712,-2508.32465106,-2414.64781219,-2463.69233977,-2486.52662212,-2512.97291586,-2515.86422595,-2581.1038181,-2497.59349058,-2464.80755839,-2589.25593966,-2462.35518354,-2457.49728683,-2476.9990019,-2472.81324964,-2464.71927884,-2469.58427363,-2477.68426737,-2442.2577632,-2505.41524053,-2491.21199209,-2485.86727659,-2511.25533121,-2471.97033217,-2399.43695006,-2484.61951527,-2408.34891705,-2475.11340418,-2500.61591251,-2515.18185029,-2504.55287795,-2466.39637834,-2404.66981499,-2411.95083691,-2429.48869749,-2459.44903274,-2439.21263916,-2513.37412955,-2478.74914154,-2546.85153691,-2529.29142257,-2437.84677497,-2454.66400533,-2489.21051332,-2474.72693787,-2448.51820796,-2454.1912826,-2506.95057896,-2530.36959551,-2591.04758021,-2499.14858885,-2490.29736062,-2510.13534562,-2484.72710963,-2512.93995963,-2497.17542895,-2556.47266431,-2471.14523021,-2522.48313964,-2514.33757908,-2513.65997027,-2563.08201543,-2523.60923016,-2450.40987462,-2494.49724311,-2508.82257404,-2406.51912592,-2538.54041313,-2533.2971915,-2506.46594412,-2539.97439659,-2438.57253434,-2510.03750253,-2595.00072661,-2556.6582241,-2494.3717171,-2422.46713064,-2428.81680755,-2457.44769877,-2491.91025525,-2535.47768053,-2573.7995941,-2535.20254767,-2536.56532641,-2477.74411907,-2430.14620941,-2461.24031813,-2424.98885758,-2558.40120182,-2572.28928831,-2528.53827645,-2520.75464962,-2468.52035722,-2464.89714396,-2548.40343439,-2460.32615667,-2445.58653738,-2408.72489095,-2453.19815548,-2445.67381795,-2486.98841766,-2469.36204579,-2496.35139201,-2415.7645788,-2454.91280182,-2465.6298377,-2550.06247695,-2478.23120701,-2524.00274323,-2486.30688321,-2375.68491997,-2578.94655519,-2578.93611204,-2455.26144143,-2494.88347961,-2637.0818495,-2613.21203463,-2562.14057023,-2432.63729081,-2597.54187791,-2537.96973882,-2484.15103212,-2456.83283627,-2401.45538884,-2454.74124711,-2453.60131009,-2437.61069392,-2476.78658212,-2477.68788345,-2497.75104857,-2550.84733998,-2537.70008236,-2496.17806342,-2530.27895784,-2516.29110774,-2484.8853048,-2524.73088874,-2500.44567073,-2512.14403351,-2551.5252909,-2579.05627594,-2455.56908387,-2608.68647224,-2474.60059913,-2511.11478997,-2456.75400465,-2468.99036584,-2438.81838547,-2361.89255948,-2497.62173281,-2461.95358206,-2510.87077542,-2443.61400505,-2472.25469086,-2527.0823931,-2546.09611144,-2492.39550911,-2531.87351758,-2485.62078613,-2459.84584956,-2474.92718893,-2512.08205916,-2530.59721678,-2485.66824152,-2522.29715838,-2522.37043508,-2506.17825181,-2547.6225875,-2520.47295984,-2422.09276946,-2410.33110999,-2422.91397344,-2435.30808804,-2476.01212773,-2514.67017225,-2414.67877923,-2488.96933135,-2476.61991697,-2455.96597916,-2465.98093127,-2591.54598285,-2441.80128057,-2546.17244709,-2560.85744256,-2617.34647237,-2556.27072668,-2472.75350296,-2512.20752842,-2411.35648934,-2441.40462975,-2443.69535168,-2490.11992207,-2478.88124124,-2477.08073869,-2461.3760433,-2469.48419653,-2438.11492307,-2457.91020371,-2430.51015409,-2440.52885782,-2537.91146934,-2533.787834,-2363.85644794,-2485.59435518,-2534.9831693,-2493.87159418,-2527.22700495,-2555.47432608,-2478.88166445,-2461.44309982,-2510.8439427,-2447.96609401,-2570.03444329,-2511.95918886,-2593.45802705,-2486.32093033,-2436.7261637,-2470.16324505,-2423.07756442,-2365.17653105,-2505.67405413,-2509.22077182,-2426.01488694,-2455.33711112,-2455.86906633,-2505.28971328,-2497.17328827,-2476.65480937,-2486.01635237,-2427.25984328,-2479.74692428,-2388.86533986,-2492.85496212,-2443.47578612,-2430.49830569,-2450.78546788,-2391.78928931,-2516.75300518,-2409.54303257,-2509.92751359,-2465.66277656,-2500.50194032,-2520.64263539,-2455.9826754,-2468.19485049,-2452.03028678,-2412.88725311,-2431.58419377,-2533.0657227,-2483.12741208,-2385.87072493,-2518.64017082,-2533.51437678,-2513.1031804,-2532.87040615,-2512.44034533,-2389.50046032,-2474.43389704,-2454.60583007,-2469.15970455,-2444.20627894,-2433.6938547,-2421.04356195,-2508.32462656,-2538.88942693,-2513.92981018,-2504.92228175,-2509.16245093,-2545.70458565,-2493.50843221,-2529.32983377,-2452.24728446,-2485.84353921,-2496.35345972,-2453.18748063,-2495.81383006,-2437.13500108,-2471.21235879,-2540.0263853,-2453.72960505,-2442.27893215,-2410.18276084,-2409.14071148,-2470.45767957,-2486.35835798,-2463.31597433,-2527.48690965,-2546.80679793,-2468.54729064,-2383.5545052,-2482.97208603,-2505.50251633,-2461.2260443,-2487.86550936,-2429.50040202,-2447.21300811,-2386.06191344,-2506.690641,-2512.85211355,-2414.24286319,-2398.31868359,-2413.68715096,-2439.91525751,-2454.2738079,-2407.97700194,-2424.59655123,-2488.95781803,-2483.42266966,-2421.12337157,-2456.65301213,-2500.3790121,-2537.38701796,-2532.58643918,-2561.98158566,-2483.55018302,-2479.69976271,-2506.89450432,-2417.82453995,-2517.93399131,-2527.25140127,-2400.93974332,-2422.45151615,-2438.56110025,-2425.99954168,-2433.10692246,-2449.97833121,-2423.49535963,-2503.54367899,-2488.79518654,-2465.18479459,-2407.6682732,-2468.98152422,-2475.45791333,-2542.31572703,-2560.32455806,-2521.24728322,-2462.82540433,-2481.56671194,-2506.28526568,-2506.04659068,-2449.97262872,-2496.37900038,-2451.04972657,-2465.40485955,-2413.33938581,-2452.65279922,-2540.92971589,-2550.73437022,-2534.31451208,-2507.85468288,-2491.25923394,-2513.70213634,-2439.22085861,-2559.78940809,-2528.55023204,-2474.25225569,-2407.24654648,-2413.16821093,-2575.2340738,-2453.58254551,-2439.16916565,-2552.61683053,-2411.06824599,-2527.17471756,-2503.76102703,-2543.44401411,-2525.91540567,-2472.54386016,-2475.40335113,-2487.86018123,-2478.33664909,-2505.97045542,-2533.01056562,-2518.17705991,-2570.63064765,-2560.97202136,-2436.01238491,-2435.69580047,-2445.79811031,-2519.45978112,-2550.55861678,-2490.07742146,-2549.86490664,-2531.75531583,-2548.80099182,-2400.37242458,-2527.95936785,-2494.89628293,-2402.01462293,-2418.30613147,-2361.89280431,-2418.74238247,-2421.4470176,-2486.52403477,-2526.08253908,-2521.5387355,-2539.3969734,-2466.27987123,-2652.79010266,-2605.56347545,-2478.59964416,-2449.48658943,-2472.25530882,-2453.30533227,-2421.68591217,-2424.07288446,-2448.59363831,-2470.18937536,-2476.64993813,-2461.61617167,-2517.54701181,-2433.04603538,-2482.8829542,-2455.29111671,-2456.86165038,-2423.74369098,-2474.7800003,-2463.35266532,-2555.52221339,-2499.17622197,-2420.13682668,-2531.9508235,-2492.84763939,-2449.72224751,-2436.85318151,-2469.41165018,-2560.31888403,-2525.98016427,-2583.27722698,-2455.76361951,-2504.05213873,-2407.08527501,-2467.15947609,-2452.66780169,-2433.69953238,-2516.27951989,-2360.55243925,-2486.19167847,-2463.24045584,-2455.91124287,-2524.43858978,-2531.10204249,-2500.97983426,-2547.51445905,-2482.33608132,-2460.17897312,-2480.30845485,-2471.113858,-2494.58072678,-2431.63275978,-2414.503766,-2486.69438316,-2506.6974534,-2463.02136377,-2481.68352864,-2454.67240057,-2506.6717012,-2534.5439288,-2484.12598467,-2534.44317071,-2472.1151782,-2517.15146122,-2483.75779087,-2455.10891347,-2557.51179824,-2530.93929079,-2516.13697828,-2429.0785652,-2465.24966433,-2482.16755046,-2471.48771987,-2425.40555054,-2423.54440309,-2460.31123266,-2467.84744469,-2443.6381426,-2404.60013436,-2416.04622035,-2405.88305298,-2437.63666454,-2431.84339254,-2433.74835969,-2463.61915345,-2528.59481909,-2462.66076974,-2396.73864345,-2498.21299101,-2423.20322792,-2516.49664485,-2538.25603404,-2535.52138996,-2567.00392322,-2458.01761324,-2439.16766569,-2436.57948273,-2416.26500154,-2413.19050315,-2486.44550472,-2524.56880531,-2516.26058597,-2427.7085173,-2459.26005484,-2475.81106752,-2435.86815889,-2413.62490511,-2420.26170908,-2406.72464948,-2528.06562383,-2516.43892908,-2497.36701493,-2491.29632155,-2484.97124101,-2445.24579623,-2459.06731147,-2529.087401,-2444.42543231,-2431.6852675,-2387.25982493,-2409.55729159,-2495.29990777,-2531.74057507,-2505.81624689,-2451.67612038,-2418.11052161,-2408.08213852,-2484.19478355,-2540.38362094,-2580.67225372,-2581.5233847,-2502.62093583,-2512.5282092,-2554.77255674,-2518.83494813,-2386.42604402,-2601.3018944,-2549.32537659,-2513.23016016,-2527.72944686,-2471.1587536,-2518.46837895,-2541.57266369,-2535.76622707,-2449.07142571,-2459.26398073,-2425.44315942,-2484.3419871,-2524.04635559,-2431.83543982,-2479.77142621,-2510.63358103,-2451.44827688,-2493.0791946,-2474.43078315,-2493.96349608,-2433.57297756,-2445.16041256,-2465.62348915,-2474.55229627,-2437.64062336,-2495.3965133,-2469.08970849,-2498.8039801,-2489.50514295,-2465.28350724,-2510.89869627,-2410.65530673,-2486.75087407,-2562.89417541,-2545.28264159,-2454.40810344,-2471.63661323,-2513.93919385,-2427.87368767,-2485.06120666,-2474.784058,-2512.22481961</ExpDist> </res> /res/ExpDist net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_GetMobsxml_textXMLRshell_MakeHistogramMobsXPath_GetMobsnodelistRshell_MakeHistogramExpDistXPath_getExpDistnodelistRshell_MakeHistogramAlphaAlphaXPath_getExpDistxml_textXMLplotRshell_MakeHistogrammyplot 71ad5b63-372d-40a7-9249-ba16b238f5b8 2013-01-18 13:10:35.355 UTC da473326-745a-4987-afa6-67a8488836fa 2013-01-18 14:22:09.275 UTC d98d7559-7d3c-407c-ba6e-8c234e399229 2013-01-18 13:30:29.16 UTC 8db48588-d89c-4179-b9ac-fb49ce80365d 2013-01-18 14:23:37.595 UTC 6965f9c8-e172-4682-b286-9786cecaed79 2013-01-31 12:16:35.220 UTC e45ab87e-4aef-4e27-9cb2-6996bca88811 2013-01-18 14:23:04.208 UTC 7a7bbd57-bf34-4b66-bd97-d085a37dce6b 2013-01-18 13:43:32.415 UTC 3efe3c8e-5902-4e6f-b432-c3f9cbe9faf5 2013-01-30 22:50:49.812 UTC 3d81b3f0-5b44-4fac-851e-4f1693264a29 2013-01-18 14:34:18.956 UTC 7b6294fa-4c8c-4d11-9798-dbb327c37c12 2013-01-18 13:13:16.820 UTC c3b130f6-35a6-40d1-a359-ae49b1a512dd 2013-01-18 11:47:38.828 UTC bbaa94d2-2191-46c8-9baf-ed2b422ba9df 2013-01-18 11:45:05.828 UTC 1ba0dcd1-73fc-4891-b705-eaffd4de05f9 2013-01-18 14:32:21.787 UTC 761b4e64-f687-4e50-84db-e4b0646c511c 2013-01-18 14:29:54.690 UTC 93f8056c-42f1-4a59-946f-a2f8d3914baf 2013-01-31 13:28:27.618 UTC 227eb774-23e2-42ca-83e4-5aef35d1bff6 2013-01-18 14:05:48.632 UTC 36a6c89d-26a3-4420-84f1-6548b5a893a4 2013-01-31 11:45:36.60 UTC 82058ebc-ca68-43ab-851c-977c1e028d14 2013-01-18 13:11:08.87 UTC 1da06956-3e64-47aa-a538-7ba80170460c 2013-01-18 13:12:08.988 UTC 1fc290a8-d5be-494b-bc2a-c08b0c1705a2 2013-01-31 12:23:39.281 UTC 570b95ed-264c-4387-9a36-fb4e25d3b581 2013-01-18 14:18:34.579 UTC 053d63f4-a475-4f83-8059-381d0c48223c 2013-01-18 13:45:52.704 UTC 49a8f51f-e2de-4573-af93-53c01eaeb530 2013-01-31 12:23:03.876 UTC a04d0f7d-6b72-4b7c-a724-0e40b0607840 2013-01-18 14:32:53.824 UTC 46bfa32d-0929-4c54-a300-1fd999241ff6 2013-01-18 13:14:34.866 UTC 1a6066d0-2af8-471c-87ae-38794792a587 2013-01-18 14:15:19.960 UTC 8676cbb9-0719-4914-8f39-28270215165d 2013-01-18 14:17:35.129 UTC 3d2af9f4-d845-4876-aecb-acf48fb42ae9 2013-01-18 14:31:43.924 UTC c54159e0-c6a6-4eff-94ab-1cc4227d9e97 2013-01-18 13:47:27.908 UTC a7ad767e-2ffe-4c35-a331-46c4493b9568 2013-01-31 12:05:56.745 UTC a6f1fe63-35db-45b1-8ec0-9c1326128a29 2013-01-18 14:28:33.303 UTC 47c4c3c8-896c-430d-bb00-899d253b2308 2013-01-31 12:11:22.252 UTC d6f3e11c-081d-4ecc-b65f-1f105cda6ec2 2013-01-18 13:12:23.690 UTC 898c126e-107b-468d-a69e-53f57a9c0d06 2013-01-18 14:19:50.940 UTC 3b6799f4-700c-444f-b53c-30dfd8717e5c 2013-01-31 12:21:21.111 UTC 86296fa5-ceb5-4884-a657-bb4fbf6f7c39 2013-01-31 12:20:38.421 UTC b627d64c-d532-4e95-9c6a-7a8cd011bd5b 2013-01-18 13:02:39.729 UTC dc364ced-28d9-4d3c-be4f-257fca5c3639 2013-01-18 14:05:03.590 UTC 1e79fbaf-f64e-4888-9898-50350c3632f2 2013-01-18 13:15:14.331 UTC a192cea0-c08b-4d74-8c82-245e75537ff9 2013-01-30 17:54:24.348 UTC bc58c136-fefc-4be3-a6f1-35984845bc64 2013-01-18 14:14:18.893 UTC 274d23ca-206c-4823-bd4c-36e79194a36f 2013-02-01 17:02:29.461 UTC 4cdd9e34-b3a5-49c7-9f4b-11dcd60d70fb 2013-01-18 14:13:33.917 UTC 03fcf575-2673-414d-81c7-2cafc1d681ba 2013-01-18 14:21:04.943 UTC d27fc20f-9957-4ba8-b7ea-999ac99fda50 2013-01-18 13:46:37.300 UTC cc700065-877b-4f6f-bc60-2afefb4e4c72 2013-01-18 13:48:33.571 UTC 7ff07a99-59fc-48b1-a490-f6787b8df877 2013-01-31 12:00:39.500 UTC Phylogenetic_inferenNexusFile00JobIDNexusFileNameUploadFile_Nexus4MrBayesFile_name0InputBody0REST_Service_redirection00net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeAskMrBayesServicevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity MrBayes_16CPUs net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeCall_MrBayesJobName0Argument0JobID11net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeAsk_FileNamevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity Choose a File Name net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeask_FileNamemessage0answer00net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity message 0 java.lang.String true title 0 java.lang.String true answer 0 0 ask VelocityTemplate false net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeUploadFile_Nexus4MrBayesFile_nameask_FileNameanswerUploadFile_Nexus4MrBayesInputBodyNexusFileCall_MrBayesJobNameAskMrBayesServicevalueCall_MrBayesJobArgumentUploadFile_Nexus4MrBayesREST_Service_redirectionask_FileNamemessageAsk_FileNamevalueJobIDCall_MrBayesJobJobIDNexusFileNameask_FileNameanswer d1e0cf97-9cb0-49e3-a551-a07517f38eae 2012-09-21 15:17:03.341 UTC 654e704d-1e41-4b72-9933-c2ae0cf51922 2012-06-08 08:39:44.818 UTC 145158db-9889-47be-ad17-e0907c558310 2012-05-10 07:30:02.691 UTC 31c4582c-7fbc-436f-808e-219c29dd543f 2013-02-18 16:23:22.79 UTC 86a8ff0b-b6b2-4195-aa27-78434bd71ce6 2013-01-30 22:29:37.592 UTC 43a9b22d-0fca-4ca5-817b-821670a43d5d 2012-10-01 10:20:14.331 UTC e0a2fd90-6178-4d3c-abd0-f1badc8860bc 2013-02-18 17:11:09.734 UTC 1be2f39f-ee9d-428d-87f4-c553ac861b8b 2012-09-27 13:12:32.717 UTC 2a525328-2870-4779-9c2a-a220733ad02f 2012-05-07 11:24:21.300 UTC 72355fee-027c-40cf-83dc-4688c049f480 2012-05-10 07:45:43.653 UTC 147bdfaa-2d8e-4634-af3d-5287c5e1bc93 2013-02-18 21:54:07.300 UTC bce05b28-e93a-478a-8e11-5b7421c236da 2012-09-27 13:56:16.135 UTC 0de23bd7-a836-43aa-9d09-db059b20b545 2012-12-17 20:52:48.670 UTC 4e9ed3ca-87ce-4c1b-9f45-0d4235a79d5a 2012-09-21 14:38:51.392 UTC c2a6371c-aa82-4720-8901-ca21e64700a7 2012-10-01 11:08:06.43 UTC 614842a1-6ddb-4c35-9d9f-969e5da7619f 2012-09-27 13:48:47.807 UTC 12c1f28a-bea1-427d-b311-6718aa813bc8 2012-05-07 05:01:08.484 UTC 84ce3b14-97fe-4304-bceb-9b4cd957c932 2012-05-07 09:21:22.516 UTC 236ea769-4950-4cbc-a49c-50fbaff3289a 2013-02-18 17:16:35.103 UTC cb6364bb-1322-491f-94ae-29d7ccad4a47 2013-02-01 16:59:58.676 UTC 37ec3cd4-9442-4c9a-aaa7-b42fab661cbf 2012-09-27 13:23:19.565 UTC 1546a518-e55d-430a-a352-4ed36668950e 2013-02-01 16:55:16.742 UTC 9216d257-6a60-4e2e-8edd-2b586dda17ba 2013-02-19 07:54:45.892 UTC f2eec3d8-e7d3-475f-8785-fdadab1e2b99 2013-01-17 14:55:21.80 UTC ae0d823a-0415-40ff-81c2-97b6fcaf6dc0 2012-09-27 14:27:42.360 UTC 47c9c213-e8fa-436c-a287-a83fc5208c6f 2013-01-18 14:36:21.222 UTC a578675c-5281-470b-a9c6-5cda2dc96e99 2013-01-30 22:51:08.196 UTC 2b42be78-e780-4257-9c67-d2a51b8c4827 2012-05-05 05:26:39.935 UTC 6b5b4660-45a4-4484-a012-1f591d68225e 2012-05-05 05:39:14.842 UTC 832a8933-7d2e-4cf4-8757-1cc8c79170c9 2012-05-04 20:36:30.12 UTC 3149d816-5e8f-4c55-9019-1a16e770304a 2013-02-18 22:01:31.888 UTC 22f0a2d4-62a1-4d69-82a9-89004438c407 2012-05-04 20:19:24.424 UTC c95dc9e3-b14f-4055-b5ef-2a351d82e5e0 2013-02-19 07:41:05.564 UTC Phylogenetic inference with MrBayes and NoGUI, test of MCMC convergence (GEOKS) and fit of the model on the data (Posterior Predictive test) 2013-02-05 16:19:21.451 UTC 314feaef-2962-4ca1-b9d7-d3a6910ea7ec 2012-12-17 20:52:03.795 UTC 47880dd0-388d-40e0-b60f-97149a7133de 2013-02-01 17:19:45.120 UTC 0b674834-7e1a-4cbb-b036-b060fa321d4c 2012-08-31 14:07:32.782 UTC 40699599-a001-42c0-8759-88aa266a0271 2012-09-27 14:47:53.418 UTC 595fa70e-f728-416d-b783-1b367a04fde7 2013-01-18 14:41:22.116 UTC 7b6d5741-adce-4f93-96d4-891441f374c3 2012-05-04 19:55:35.621 UTC 48e8950c-3739-4f2f-b32a-1e49cf0e9649 2013-02-18 17:03:06.336 UTC 1221473d-5d8f-4bd1-ae73-73c16bbf8665 2012-10-01 11:34:27.628 UTC 98a761ed-d95c-4ceb-bbe0-33d869cb0cce 2012-10-01 14:41:20.67 UTC 02bff899-ebc9-4edd-bc6b-d8074a66f141 2012-09-27 14:49:05.721 UTC 0bfec0eb-be30-43c2-b8f6-8a0b44f6747a 2013-02-20 13:03:04.260 UTC c5d850c1-e111-42d2-ab76-bfd0af11f040 2012-06-08 08:32:43.388 UTC 7e529d1f-daa7-48b0-a1fd-465d9c2d3792 2012-05-05 05:59:23.297 UTC 0acad263-fe61-45b7-abd6-66b493be4166 2012-06-04 11:40:43.39 UTC e397ca8c-9f58-4259-911b-f04e492e6449 2012-05-07 06:34:39.162 UTC 01d42280-c0e3-49ef-879e-4cb375f539dc 2012-09-21 11:00:21.91 UTC f6dfc090-2f2c-477b-807e-77451e50a763 2012-10-01 14:43:17.747 UTC 1d74772a-ac74-4da8-bf09-2513241893b6 2013-02-01 15:01:52.115 UTC f2cf9ee0-2879-475b-a39d-8c991511ded9 2012-05-05 05:36:14.476 UTC 62811f0c-70f7-4a4a-bc63-ff6c45c445ba 2012-05-06 19:42:35.26 UTC 92687a2d-c280-4e82-bfd8-0a36736b49ba 2012-05-04 20:15:14.403 UTC 2ed748c1-f20f-41b7-a426-1e1a3b52059c 2012-05-06 20:16:44.23 UTC 0d861536-4a1d-48e9-ad10-c0cac7399b8b 2012-09-27 12:50:04.836 UTC 71d60b33-01b7-45f4-b35f-431a2275efb1 2013-02-18 15:53:36.279 UTC 148a5fd3-5119-422a-9787-7a0328c6b0f3 2012-09-21 15:04:35.216 UTC cea94a2d-87c7-4e88-aeb8-4917cf0d5d79 2012-05-04 20:22:08.233 UTC cb4c52fb-4491-490e-8935-2872e2a25c09 2012-12-17 20:53:14.82 UTC 91c502ab-7dbd-4946-9a79-275c218698ea 2012-09-27 12:52:22.945 UTC a27cfd7f-7b45-43b4-8ccb-130cf0d9733a 2012-09-27 12:49:24.32 UTC 2cd3a593-21b6-4910-b425-9ecdb88279ec 2012-05-04 20:55:37.723 UTC aba185c1-c311-4ef9-a92d-b9a8ddd5304f 2012-05-10 07:45:12.499 UTC 2e88e37f-3a55-4402-9e24-a31bbefbace3 2012-05-06 20:01:48.485 UTC ff51bb66-2602-481a-82b4-7676456316df 2012-05-04 19:50:27.88 UTC 4c876aa9-7a31-45e1-87bd-bd7d53d8ec43 2012-10-01 10:12:35.502 UTC 92d8638e-e7d8-4de7-895c-a15bbf047874 2012-10-01 11:27:41.460 UTC 50c020ff-f443-422a-abf5-e25d8b6b7ba5 2012-09-21 10:25:37.359 UTC 4c571cdb-e311-423e-bf31-27496bb626a1 2012-09-21 14:59:52.390 UTC 3a7e3210-62e4-4659-8cbc-cfe56e79b733 2012-11-30 12:47:45.295 UTC 853af834-c55a-4f72-be8f-1b03ff20bd8f 2012-06-08 09:36:57.264 UTC 6e1fadda-86ac-4819-9055-f2f9b4529cd8 2012-05-05 05:26:04.315 UTC 1d45895c-3cd1-42bf-8006-2e72588110a0 2013-01-31 10:58:38.682 UTC 5f9c3a31-a651-4cc2-a544-78f5783f9908 2012-05-06 19:49:52.928 UTC 595d22d9-a6b3-4e5a-9b46-50367a689d7e 2012-05-24 16:26:56.417 UTC 6eaa8577-af0a-40ba-abd4-96882b560b33 2012-09-27 13:06:49.941 UTC 28dda23e-c7dc-4d44-ac20-86cff432f946 2012-05-07 11:33:56.157 UTC cb4c52fb-4491-490e-8935-2872e2a25c09 2013-01-17 15:05:59.451 UTC 22e1cb1c-e82d-422a-a9f6-93cd3965662f 2012-09-27 13:27:39.302 UTC 3986bca4-3f44-4855-927c-c5792ede5e50 2012-05-05 05:33:43.971 UTC 86a91296-5af0-4692-b7ba-d7d0365c7e97 2013-01-31 13:28:47.932 UTC 6b0bfd33-6495-4668-bf08-4e03f64658a3 2012-11-28 15:47:13.111 UTC d5085302-3ecf-437c-9919-d736050878ac 2012-10-01 14:38:06.182 UTC fc073daa-c6c4-4310-9b95-53362d175916 2013-02-18 15:22:04.38 UTC a4033e8d-b19c-4187-84b6-15ffbaf2d805 2012-10-01 13:50:02.205 UTC ffe5fb3f-cad4-4f60-bd77-776a19a37a27 2012-09-27 13:24:34.726 UTC 30d176de-d29b-466d-b9a5-6d28a4a2bc3c 2012-10-01 09:16:33.864 UTC 224735cc-6188-45b8-aee3-5ca3e155d91e 2012-09-27 13:43:00.883 UTC 1467395a-4390-4d0c-94f8-eec457c1c510 2012-11-28 17:28:27.85 UTC 501cffd4-34cb-4075-b2b1-39b06ac74d3d 2013-02-05 15:51:18.684 UTC c54ccc24-c297-47a6-91b2-759592b9553e 2012-09-21 10:50:08.42 UTC 48a6027e-a36c-4e40-a39e-9e06ae14ba89 2013-02-18 15:19:38.341 UTC saverio vicario giacinto donvito bachir balech 2013-02-01 15:00:22.266 UTC 13e17a4a-4643-4e7b-9927-9bd4c6c59aac 2012-05-04 17:41:18.866 UTC cba860ff-9ebd-40de-8547-6c3145656910 2012-10-01 14:09:52.466 UTC Phylogenetic inference with MrBayes and test of MCMC convergence (GEOKS) and fit of the model on the data (Posterior Predictive test) 2013-02-01 15:01:51.770 UTC 6fd8b5cf-e95c-47fd-b083-f9c37e8f77c3 2013-02-20 12:59:37.487 UTC 3534f209-570c-452a-8193-b5ffc9cabc72 2012-09-21 10:44:29.55 UTC 6e0a2723-70bf-4a15-b6c5-7600193dca5a 2012-09-21 10:41:50.255 UTC f9c891c3-c38d-4d19-bde5-17ede9b84cd4 2013-01-31 11:46:12.660 UTC 725f4a9d-7d95-4352-ba92-0e9615df53d9 2012-11-22 15:52:00.494 UTC be99edbc-d1f0-4577-9265-0adeb47aa560 2012-05-05 05:31:48.797 UTC 2d7c8239-d18b-4173-89e6-712d06c61f51 2013-02-05 16:19:23.941 UTC 3e5be10b-fbfc-40df-9fc6-5915993a6571 2013-02-19 07:44:36.728 UTC db82ef12-c7de-4ce1-b0b0-1a85d432884c 2013-01-31 12:42:53.95 UTC Workflow1URL00OutputFullyInteractiondestination0net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity destination 0 text/plain java.lang.String false http://www.mygrid.org.uk/taverna/internal/biovel/open_url.html LocallyPresentedHtml true net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeString_constantvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity Dummy net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeInteractiondestinationURLOutputFullyString_constantvalue e67a37fd-4c95-4b40-a88e-c4c1903f2f80 2012-05-04 20:12:04.919 UTC b584c1ec-b882-4136-a800-b3532cfab19b 2012-05-10 07:45:04.851 UTC 8ba75a8c-c9e1-4939-a604-f832383af079 2012-05-04 20:12:33.214 UTC 11f188b9-1ba3-478c-a8af-73369e0b7750 2012-05-04 20:21:24.403 UTC 55542b17-acee-4db7-91d0-f98393aa66f3 2012-05-04 22:48:22.640 UTC Workflow14jobID00StatusOutput_PathFastaFileWorkflow36JobID0Status00Output00StandardOuput11net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop <activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns=""> <inputs> <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> <name>Status</name> <depth>0</depth> <translatedElementType>java.lang.String</translatedElementType> <allowsLiteralValues>true</allowsLiteralValues> </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> </inputs> <outputs> <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> <name>loop</name> <depth>0</depth> <granularDepth>0</granularDepth> </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> </outputs> <classLoaderSharing>workflow</classLoaderSharing> <localDependencies /> <artifactDependencies /> <script>loop = "" + ! Status.equals("done"); if ("true".matches(loop)) { Thread.sleep(2000); }</script> <dependencies /> </net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity> true net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeWorkflow36JobIDjobIDStatusWorkflow36StatusOutput_PathWorkflow36OutputFastaFileWorkflow36StandardOuput 2bb836b5-2738-4f3f-864d-5a77e76bdd1f 2011-11-30 17:09:13.282 UTC 4cc9395d-b178-451b-aef7-a34678d0d490 2011-11-30 15:51:55.76 UTC 25d638c9-672c-498e-913b-4bceb4230f8e 2011-11-30 17:10:59.924 UTC 745b7346-e8be-4864-ba02-1ae1d255f50d 2012-04-05 09:28:59.571 UTC 36001f84-a643-4173-80ee-118a0ceaecbc 2011-11-30 17:10:08.264 UTC be8cd221-9345-4c91-9fb4-b413978b0a6a 2011-11-30 16:05:00.470 UTC a2b6b247-c946-4883-8d6d-469ea6573f93 2011-11-30 15:51:07.192 UTC 97c8a203-1938-4e3f-90f3-87694c3a795a 2011-11-30 15:59:45.57 UTC e2682dca-1389-49ad-a886-491fa918d268 2011-11-30 15:54:01.684 UTC eb0a0648-1196-4215-b698-acb8729bf045 2011-11-30 15:47:24.13 UTC a3848c5b-b720-4bc7-8e8a-d0a4e305b43f 2012-04-02 16:09:05.883 UTC bed4b280-a552-4ad9-8bfe-54a2fabae11f 2012-04-05 09:41:33.486 UTC bda5ff28-ff17-4ff2-9191-13acd55b73f3 2011-11-30 17:07:35.484 UTC bcc60618-7449-4965-b39d-d0d6d90ec7db 2011-11-30 15:49:46.56 UTC 0b2a7cd3-3853-434d-b462-4a2d7796ea7d 2011-11-30 15:48:49.960 UTC 3c9f8d96-0c37-4a18-8214-289acc1482fb 2011-11-30 16:02:25.713 UTC 15c52e11-e32b-46b2-857c-89226396dc45 2011-11-30 15:41:58.998 UTC 5f07e956-6857-4261-ae1e-1ab5ba32ab08 2011-11-30 16:07:05.176 UTC 4afab38a-1fec-43b4-8a32-83eaa59e8b8d 2011-11-30 15:53:41.975 UTC 857db6d7-3775-4738-bf94-5c6a78c1fb8b 2011-11-30 16:00:08.58 UTC 3aba8bc3-36ee-473d-a504-288a1f9998df 2011-11-30 16:07:49.591 UTC 0ca845f5-dbee-4c11-8b69-2843a6c7e40e 2012-05-03 15:26:02.481 UTC b9cf606e-166f-471c-b51e-d2f517526ad1 2011-11-30 17:00:56.590 UTC 8a70d234-45be-42bd-8bff-039af9b1c962 2011-11-30 16:26:18.954 UTC a65689de-3539-4833-9e3e-c32aa9237d39 2011-11-30 15:52:17.202 UTC 7b7863ae-a026-4317-8084-9a00049fccf8 2012-04-05 11:23:09.57 UTC f209eccd-51b2-48c5-ba45-48f6327a7468 2013-02-19 13:57:48.348 UTC 38b1f6f3-d29c-408a-9360-46930d61cff7 2012-05-04 09:55:44.596 UTC