Metagenomic_Traits_Sdinuc00 https://dl.dropbox.com/s/4bb0odcokgvdviq/gos_dinuc.txt 2012-12-13 19:01:34.297 UTC File containing di-nucelotide frequencies. Example is from GOS dataset. 2012-12-09 22:11:10.716 UTC codon00 https://dl.dropbox.com/s/25xnqznskjdr3aa/gos_codon.txt 2012-12-13 19:01:42.251 UTC File containing the codon frequencies of predicted ORFs. Example is from GOS dataset. 2012-12-09 22:11:02.563 UTC aa00 https://dl.dropbox.com/s/4xlxy8nh965r4ts/gos_aa.txt 2012-12-13 19:01:49.791 UTC File containing the amino acid frequencies of predicted ORFs. Example is from GOS dataset. 2012-12-09 22:10:54.903 UTC func00 https://dl.dropbox.com/s/2m8vzfuabrcoebu/gos_functional.txt 2012-12-13 19:01:25.894 UTC File containing a table of frequencies of functional annotation per sample. Column= functional annotation with first column = sampling site/sample, row = frequencies per sample. Example is from GOS dataset. 2012-12-09 22:18:12.642 UTC phylo00 File containing a table of frequencies of taxonomic group per sample. Column= taxonomic annotation with first column = sampling site/sample, row = frequencies per sample. Example is from GOS dataset. 2012-12-09 22:18:04.292 UTC https://dl.dropbox.com/s/bcq2dkptvxau7pm/gos_phylo.txt 2012-12-13 19:01:18.208 UTC traits00 https://dl.dropbox.com/s/yyysljpdxzbdkrk/gos_traits.txt 2012-12-13 19:01:10.119 UTC Two column file specifying metagenomic description, column title must be Description e.g. A header row could be like this Site Description TotalMb NumberReads GC varGC rRNA Genes EGS ABratio TF Classified 2012-12-09 22:35:24.334 UTC prefix00 mg-traits-stats 2012-12-09 19:04:14.574 UTC Job identifier that will be used to label result files. 2012-12-09 19:03:59.874 UTC filepath00 Output directory to save images and results 2012-07-07 14:18:01.9 UTC Windows: c: *nix: /home/user/ MacOS X: /Users/user/ 2012-12-14 11:37:33.359 UTC Validator_out Report data validator state 2012-12-13 19:03:18.299 UTC NMDSphyloHelIn1funcHelIn1phyloIn1traitsIn1phylo_nmds00func_nmds00phyloNmdsLog00funcNmdsLog00phyloNmds00funcNmds00 Perform Non-MultiDimensional Scaling analysis of traits 2012-12-14 16:51:49.226 UTC net.sf.taverna.t2.activitiesrshell-activity1.4net.sf.taverna.t2.activities.rshell.RshellActivity traitsIn 1 false phyloHelIn 1 false funcHelIn 1 false phyloIn 1 false phylo_nmds 0 0 func_nmds 0 0 phyloNmdsLog 0 0 funcNmdsLog 0 0 phyloNmds 0 0 funcNmds 0 0 false springer.grid.cf.ac.uk 6311 false false traitsIn STRING_LIST phyloHelIn STRING_LIST funcHelIn STRING_LIST phyloIn STRING_LIST phylo_nmds PNG_FILE func_nmds PNG_FILE phyloNmdsLog TEXT_FILE funcNmdsLog TEXT_FILE phyloNmds TEXT_FILE funcNmds TEXT_FILE net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeread_files_data_tranformation_pca_calculationaa0codon0dinuc0func0phylo0traits0traitsOut11phyloHelOut11funcHelOut11phyloOut11aaDfOut11codonDfOut11dinucDfOut11summary_traits00pcaLog00 Read input ports, transform data, calculate pkylogenetic and functional diversity and get first component for complex traits 2012-12-14 12:21:03.315 UTC net.sf.taverna.t2.activitiesrshell-activity1.4net.sf.taverna.t2.activities.rshell.RshellActivity dinuc 0 false codon 0 false aa 0 false func 0 false traits 0 false phylo 0 false traitsOut 1 1 phyloHelOut 1 1 funcHelOut 1 1 dinucDfOut 1 1 aaDfOut 1 1 codonDfOut 1 1 pcaLog 0 0 summary_traits 0 0 phyloOut 1 1 false springer.grid.cf.ac.uk 6311 false false dinuc TEXT_FILE codon TEXT_FILE aa TEXT_FILE func TEXT_FILE traits TEXT_FILE phylo TEXT_FILE traitsOut STRING_LIST phyloHelOut STRING_LIST funcHelOut STRING_LIST dinucDfOut STRING_LIST aaDfOut STRING_LIST codonDfOut STRING_LIST pcaLog TEXT_FILE summary_traits TEXT_FILE phyloOut STRING_LIST net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMantelphyloHelIn1funcHelIn1aaDfIn1codonDfIn1dinucDfIn1traitsIn1phyloMantel00funcMantel00 Performs Mantel test to the different trait matrices 2012-12-14 12:35:00.746 UTC net.sf.taverna.t2.activitiesrshell-activity1.4net.sf.taverna.t2.activities.rshell.RshellActivity traitsIn 1 false dinucDfIn 1 false aaDfIn 1 false codonDfIn 1 false phyloHelIn 1 false funcHelIn 1 false phyloMantel 0 0 funcMantel 0 0 false springer.grid.cf.ac.uk 6311 false false traitsIn STRING_LIST dinucDfIn STRING_LIST aaDfIn STRING_LIST codonDfIn STRING_LIST phyloHelIn STRING_LIST funcHelIn STRING_LIST phyloMantel TEXT_FILE funcMantel TEXT_FILE net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokePCAtraitsIn1bivariatePlot00traitsBiplot00traitsPcaPlot00traitsPcaLog00 Perform a PCA of the traits 2012-12-14 16:52:13.876 UTC net.sf.taverna.t2.activitiesrshell-activity1.4net.sf.taverna.t2.activities.rshell.RshellActivity traitsIn 1 false bivariatePlot 0 0 traitsBiplot 0 0 traitsPcaPlot 0 0 traitsPcaLog 0 0 false springer.grid.cf.ac.uk 6311 false false traitsIn STRING_LIST bivariatePlot PNG_FILE traitsBiplot PNG_FILE traitsPcaPlot PNG_FILE traitsPcaLog TEXT_FILE net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokePDFOutputWriterprefix0funcNMDS0phyloNMDS0bivariate0biplot0pcaPlot0filePath0 Write to disk all the plots (PDF format) produceed by the analyses 2012-12-14 16:53:05.937 UTC net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeTextOutputWritertraitsPCAlog0prefix0traitsSummary0phyloMantel0funcMantel0pcaLog0phyloNmdsLog0funcNmdsLog0phyloNdms0funcNmds0filePath0 Write to disk all the logs and results from analyses 2012-12-14 16:52:36.436 UTC net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDirectoryNotFoundvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity Input a valid file directory net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokedirectoryNotFoundTitlevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity directoryNotFoundTitle net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokedata_validatoraa0traits0dinuc0func0codon0phylo0message0title0filePath0aaOut00codonOut00dinucOut00funcOut00phyloOut00traitsOut00errorOut00filePathOut00 This service validates the input data. Checks if the file is empty and if there are more than 2012-12-14 11:39:50.211 UTC net.sf.taverna.t2.activitiesbeanshell-activity1.4net.sf.taverna.t2.activities.beanshell.BeanshellActivity aa 0 text/plain java.lang.String true codon 0 text/plain java.lang.String true dinuc 0 text/plain java.lang.String true func 0 text/plain java.lang.String true phylo 0 text/plain java.lang.String true traits 0 text/plain java.lang.String true filePath 0 text/plain java.lang.String true message 0 text/plain java.lang.String true title 0 text/plain java.lang.String true aaOut 0 0 codonOut 0 0 dinucOut 0 0 funcOut 0 0 phyloOut 0 0 traitsOut 0 0 errorOut 0 0 filePathOut 0 0 workflow net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeNMDSphyloHelInread_files_data_tranformation_pca_calculationphyloHelOutNMDSfuncHelInread_files_data_tranformation_pca_calculationfuncHelOutNMDSphyloInread_files_data_tranformation_pca_calculationphyloOutNMDStraitsInread_files_data_tranformation_pca_calculationtraitsOutread_files_data_tranformation_pca_calculationaadata_validatoraaOutread_files_data_tranformation_pca_calculationcodondata_validatorcodonOutread_files_data_tranformation_pca_calculationdinucdata_validatordinucOutread_files_data_tranformation_pca_calculationfuncdata_validatorfuncOutread_files_data_tranformation_pca_calculationphylodata_validatorphyloOutread_files_data_tranformation_pca_calculationtraitsdata_validatortraitsOutMantelphyloHelInread_files_data_tranformation_pca_calculationphyloHelOutMantelfuncHelInread_files_data_tranformation_pca_calculationfuncHelOutMantelaaDfInread_files_data_tranformation_pca_calculationaaDfOutMantelcodonDfInread_files_data_tranformation_pca_calculationcodonDfOutManteldinucDfInread_files_data_tranformation_pca_calculationdinucDfOutManteltraitsInread_files_data_tranformation_pca_calculationtraitsOutPCAtraitsInread_files_data_tranformation_pca_calculationtraitsOutPDFOutputWriterprefixprefixPDFOutputWriterfuncNMDSNMDSfunc_nmdsPDFOutputWriterphyloNMDSNMDSphylo_nmdsPDFOutputWriterbivariatePCAbivariatePlotPDFOutputWriterbiplotPCAtraitsBiplotPDFOutputWriterpcaPlotPCAtraitsPcaPlotPDFOutputWriterfilePathdata_validatorfilePathOutTextOutputWritertraitsPCAlogPCAtraitsPcaLogTextOutputWriterprefixprefixTextOutputWritertraitsSummaryread_files_data_tranformation_pca_calculationsummary_traitsTextOutputWriterphyloMantelMantelphyloMantelTextOutputWriterfuncMantelMantelfuncMantelTextOutputWriterpcaLogread_files_data_tranformation_pca_calculationpcaLogTextOutputWriterphyloNmdsLogNMDSphyloNmdsLogTextOutputWriterfuncNmdsLogNMDSfuncNmdsLogTextOutputWriterphyloNdmsNMDSphyloNmdsTextOutputWriterfuncNmdsNMDSfuncNmdsTextOutputWriterfilePathdata_validatorfilePathOutdata_validatoraaaadata_validatortraitstraitsdata_validatordinucdinucdata_validatorfuncfuncdata_validatorcodoncodondata_validatorphylophylodata_validatormessageDirectoryNotFoundvaluedata_validatortitledirectoryNotFoundTitlevaluedata_validatorfilePathfilepathValidator_outdata_validatorerrorOut 2e359ff0-d36e-4496-b6fd-eb5bfd24d3c7 2012-07-06 09:23:17.197 UTC e2b5df22-4151-40fd-bfb4-904ee26a6f99 2012-07-02 20:35:52.739 UTC c2d85a18-e889-4f16-b306-743cce477fd1 2012-07-07 08:10:12.188 UTC 5099d2a9-e94a-4cdb-956c-58da59268ab5 2012-07-02 14:41:51.818 UTC Metagenomic Traits Statistical Analysis 2012-12-19 22:57:19.174 UTC 7cecea87-74df-46b2-9f81-f2971a3767ae 2012-07-03 11:05:47.571 UTC 2b0795ba-0286-4f7e-b11d-e14d1709ad4f 2012-07-02 20:38:22.837 UTC cdef0c09-57ce-40ee-9569-7f8f08ec4887 2012-07-07 14:03:34.193 UTC Antonio Fernandez-Guerra, Pelin Yilmaz and Renzo Kottmann 2012-12-07 09:54:59.80 UTC c7e34060-4588-4aff-a2b2-057f8a3eca48 2012-12-13 18:43:13.319 UTC 24de5f91-73cd-4c75-9525-bfafb64b16ee 2012-07-07 06:08:40.358 UTC cab673a2-7965-49b7-aa3d-54963789b606 2012-12-09 18:32:17.679 UTC 6b6e6f2b-a2df-430c-a6d3-4b9628e10c49 2012-07-02 21:34:47.144 UTC b94cff82-8160-487a-91e7-e45bad198c47 2012-08-30 12:30:21.717 UTC 77dd7481-d233-4f29-9f08-b1332fd8501e 2012-07-02 14:04:24.464 UTC 5beff490-916d-4731-b79c-87c4da78e38b 2012-07-02 21:13:11.521 UTC fe1ed035-d91f-4d49-8afc-b285778fe42d 2012-07-06 22:08:54.296 UTC e4cb8235-7fd3-4bac-9d50-260fbeafc424 2012-07-02 14:43:21.465 UTC 49bfa333-d2f0-43a7-9e57-61499d6a4bdd 2012-12-13 18:44:31.773 UTC 4a86d9a6-ec68-432b-910e-1ec2d5382935 2012-07-03 11:12:49.853 UTC 69f5cb80-1a17-49a3-8d0e-ba13deb17df3 2012-07-07 06:00:38.213 UTC 550c11a7-75f3-4313-a94d-8e4ee78c29ed 2012-07-06 08:10:23.957 UTC f2e0f551-b65a-4770-a125-b80fab9958c3 2012-07-07 09:22:09.997 UTC 518f69b4-5764-438b-a1c5-33b6a36bbbfd 2012-07-06 06:22:25.13 UTC d7e4cddb-de29-43b8-8a59-a13e54deacdb 2012-07-04 23:12:30.44 UTC d350144c-bcef-4db0-993a-aa5992ebcf39 2012-07-06 07:39:26.874 UTC cfa1210c-a069-440a-8439-65282b226af8 2012-07-06 07:42:14.354 UTC 278e0dd9-9f88-4ec5-b0f6-eff076dca56e 2012-07-02 21:35:49.997 UTC 8e763f1d-6466-45cb-a828-feb95b45227d 2012-07-07 15:06:43.827 UTC 99da42f2-e0c8-4801-98fe-07a061dfdbb2 2012-07-06 07:34:02.778 UTC 71d31414-705c-413d-b5ed-a6212ec4dd01 2012-07-02 15:48:32.30 UTC a26e0799-e013-49ec-b98a-87bb2e742583 2012-12-13 18:13:51.367 UTC f3401ce0-6538-4b66-8f35-7b94429346d0 2012-07-02 15:06:10.663 UTC 52580a03-06da-476b-998c-7ed7d224e544 2012-07-07 05:16:14.873 UTC 0ca28885-952b-4b2a-9c5f-505d317b1702 2012-07-02 23:23:08.322 UTC b71a2481-487d-49bc-90f1-fa093de860c0 2012-12-13 18:33:45.379 UTC 035c6ea3-ed49-484d-af0b-8a8ca6e675c8 2012-07-06 20:17:44.822 UTC 92f07d01-3b00-4abe-b1f8-9c345355c9ed 2012-07-06 09:05:30.675 UTC 9969448a-5acb-425d-8602-0108f17eaf5c 2012-07-06 09:17:25.317 UTC 9a2a7464-44df-48e7-a872-d63277ba1eaf 2012-07-06 06:52:37.18 UTC d0234f4d-47f7-404e-96d2-9ba4ea5f29d7 2012-07-02 14:04:58.384 UTC a3af853e-2b01-444b-89bc-a390cf30566a 2012-07-02 14:27:24.583 UTC e4aaea02-8d65-4619-ae78-2573a90a30aa 2012-07-06 08:05:19.662 UTC 5d15e0a3-1244-42a1-a9d7-aadb7ea1a19e 2012-07-02 15:46:33.145 UTC 96b41224-d5ff-44db-be28-47607db275da 2012-07-03 14:57:15.592 UTC bdc6b791-6979-407a-b0aa-05ca29a0aa73 2012-07-02 14:20:50.239 UTC ec7584f2-b287-44cc-896a-ec8b26120c25 2012-12-09 19:04:16.386 UTC a04282b7-9548-41b8-942d-5a2ee05cd635 2012-07-06 08:44:30.749 UTC 117bdf59-ddc3-4340-9972-178620024ea0 2012-07-02 14:16:44.17 UTC 76e8a18a-dab0-4948-adba-5c4f10a8bbe6 2012-12-13 18:34:55.647 UTC befd1dc3-b7cc-49e4-8fb1-700457eff385 2012-07-06 08:02:24.280 UTC 9698cbbc-075e-454e-91a4-1a7f367f0e37 2012-07-06 07:03:37.444 UTC d14f605b-7028-4afc-a52d-32d3bb16314c 2012-07-02 21:52:03.379 UTC c4769d27-e1af-43dd-86a4-80bf6d47dae7 2012-07-02 15:42:02.514 UTC 7e2edadf-6f02-42de-9797-d1b5dce36780 2012-07-06 07:15:10.41 UTC ed15dffc-bc69-487d-8da1-e7a9951b8aa0 2012-07-06 16:36:49.123 UTC 0915a56d-3190-4e7c-b5d2-1286efc05bbb 2012-07-02 14:13:42.708 UTC 8187b015-f905-4773-b420-511481668297 2012-07-02 21:41:47.335 UTC afc1783f-2ca1-4353-bea1-7d447d1f7b27 2012-07-03 07:13:03.752 UTC 4ca2c77a-0401-40eb-b3f3-67dfde4d8bbe 2012-07-07 14:48:41.775 UTC 70b136dc-f110-4dc5-87b1-81425e6ef349 2012-07-02 14:18:15.172 UTC 24b1a08e-0a72-436c-86f1-1660b4eca8d6 2012-07-02 20:36:36.981 UTC 7ca42608-ad99-4ced-bb7e-8daf4b1e8e68 2012-12-14 12:35:02.143 UTC d81301a7-bb95-4810-b683-4bd3d3799692 2012-07-02 14:13:13.448 UTC 67988c87-a113-4282-8960-cc68b18aecc2 2012-12-14 11:33:13.782 UTC c7c92ab3-c062-4c75-831b-193e11d5e8e3 2012-07-02 21:29:21.221 UTC 610e2c6e-1175-4bad-b17d-ea232d231731 2012-07-03 13:52:04.119 UTC fd7798db-d044-4a62-af45-36c12aaae043 2012-07-07 05:47:49.574 UTC b50eaf84-474f-4619-8e7e-08c8b355bea7 2012-07-02 14:25:38.546 UTC 147eb0df-7ca8-4358-8d1b-26938190206b 2012-12-13 18:12:10.196 UTC 41cc6fd7-1f83-42e1-9ac4-2fcd73b03274 2012-07-04 22:49:26.319 UTC 51f17416-7302-4abc-8799-1b8cacdc7b8d 2012-07-06 15:08:40.530 UTC 70a873ef-3123-4c04-a14a-0c3e0ec9b974 2012-12-09 23:05:38.944 UTC 679bd0c6-674a-48ff-b083-d6ae638720b2 2012-07-06 06:17:28.285 UTC 727fa458-d820-48b1-a2d2-23e3d42930a7 2012-07-07 06:02:24.640 UTC 719899f1-de14-420a-afb2-46945f05ac6e 2012-08-30 16:51:56.85 UTC 5b4fd62a-a886-4c4f-b867-bae8e4ca8f68 2012-07-06 16:28:38.587 UTC 5a4ae63b-8bf0-4b52-9094-fb5e7e61fac8 2012-07-07 14:07:16.338 UTC b906148e-af23-44ea-aea6-a29c94360c46 2012-07-07 15:25:44.258 UTC 45d2baaa-e86c-4a7e-ae85-97a318076241 2012-07-05 07:25:38.631 UTC 0c57b0cc-e991-423a-8468-8bbe2e8def7d 2012-07-06 09:10:22.46 UTC 1f157c12-d8f4-41a2-add8-22d7d6b2653f 2012-07-06 07:30:46.769 UTC 7e10c313-c336-42d3-a3fc-f91f5619cabe 2012-07-06 20:58:11.656 UTC d3d7865d-5fdb-44e5-a053-f23e496f2f33 2012-07-06 10:21:10.653 UTC 50586cc5-a41c-4061-bfa7-b6808268b538 2012-07-06 22:44:37.760 UTC 2022592b-75a9-425c-8747-92b58394666d 2012-07-07 05:44:54.69 UTC 456e16eb-a052-4dc6-a849-625df8f845ce 2012-07-03 11:18:45.712 UTC 4910a4c4-d7f0-4411-8185-be5af9bb9c9e 2012-07-06 15:11:39.756 UTC 000ad260-001c-403a-ac17-743001174301 2012-07-07 15:35:20.447 UTC b71a276c-20bd-4703-9258-4654bf0e0ef9 2012-07-07 05:35:22.124 UTC 794ca93c-4468-420d-a573-ebbd4f9c4c85 2012-12-14 11:40:23.749 UTC 084188b9-6546-498e-94f0-fab6e076171f 2012-07-06 07:53:49.67 UTC dcab6dd5-4a8b-40c7-a3d8-cd7f677d31cd 2012-07-06 10:19:59.43 UTC 9e401cae-64d3-495e-9f5e-fd1a23b2e591 2012-07-06 10:16:46.574 UTC 72f6d32a-56a7-48b0-8e84-44ff2944b57c 2012-07-07 14:06:27.918 UTC 993714bc-fe05-489f-b116-d7b3e5701125 2012-07-07 12:39:15.72 UTC 571ff4db-2649-4345-a83d-785cef20dd1b 2012-07-07 14:54:53.891 UTC 40d4e9e9-1486-4db5-ae63-2e5f19c5640c 2012-07-06 22:15:32.889 UTC 7314e25c-a959-49c0-87f7-efc651c12a4d 2012-07-02 21:51:34.813 UTC aa9c433a-15d8-4845-be7d-d14cadeb7cc1 2012-07-02 21:17:02.155 UTC 062a574f-5104-458d-b15b-efe2f0e20fdb 2012-07-02 14:38:56.3 UTC 4958cc1c-0f23-4ce6-87bc-3c44ddde4bc2 2012-07-03 07:21:11.565 UTC 89bb2e5f-b6e6-4db5-8a33-7ef02fb4e74c 2012-07-07 08:23:48.639 UTC c0448129-5d1f-4344-a5f8-48c87d00fd8f 2012-07-02 14:56:32.179 UTC b6d65b42-0a82-4d89-9446-1ca8895aeba6 2012-07-07 15:11:33.719 UTC 582fcbf8-d2fe-4c1c-86c3-20e34ddbd5f3 2012-07-02 20:35:07.333 UTC f06e0a17-a4ac-4b4b-ac37-85a152bc01c8 2012-07-03 14:54:02.427 UTC b8157cd3-b2b4-4c2e-9682-48aabcd11110 2012-07-07 14:00:01.528 UTC c100ce10-1fc6-42d5-b48e-62eaeed97e0c 2012-12-09 22:52:39.273 UTC d0aad825-7295-488a-8bcc-6ea58fb702b0 2012-07-02 21:37:36.99 UTC 45d46374-0389-4f74-98d9-1b5bb8b892a5 2012-07-02 21:22:32.129 UTC 185d1e69-8ff7-4bd3-a72c-c5ff00672398 2012-07-04 22:45:49.90 UTC 1afb7cc6-44ba-4ce0-b7f0-567dcd89541c 2012-12-13 19:03:20.453 UTC 8a1fb422-aad3-4044-9a24-d7c951ad7b01 2012-07-06 07:20:31.637 UTC aca3ac86-5b4d-4642-9734-ac85264ea9b6 2012-07-02 14:28:42.506 UTC 9e7115b6-57ed-47bf-9201-af1d0d65ce62 2012-07-02 14:33:22.664 UTC c8c5c87e-5ad7-430a-94b2-a2e3999d4b45 2012-07-06 07:25:01.762 UTC e52d8bc0-b838-4977-a02c-4e2bd97a6431 2012-07-05 09:21:10.309 UTC 09dfcf9f-2158-4032-9cbb-563214ff7066 2012-12-17 14:48:02.595 UTC 6e8a5141-dd8c-4d34-8274-2f7219633b5b 2012-07-02 14:07:53.505 UTC 787b4785-0f14-4f0b-9213-34b2665e684f 2012-07-02 21:14:43.838 UTC b0933a34-4859-46f0-9faa-c8f3308fc0f6 2012-07-07 09:10:34.738 UTC 1d7c03cc-f35c-4d29-8c75-e6da0b2dac53 2012-07-02 13:52:21.523 UTC 61d3f489-0091-471c-9a2c-2cc110a35933 2012-07-06 22:28:14.936 UTC 3ef19431-93bb-462b-a95a-3a049ac3b27f 2012-07-06 07:36:49.635 UTC a08abd3b-732f-4511-8d88-dad432ae732b 2012-07-04 22:53:46.232 UTC 77dae25e-512e-46d9-bbf7-ad956c04f7e1 2012-07-03 11:05:16.650 UTC 9e42339c-41fb-4df1-a1db-33a5005a160c 2012-07-02 14:14:35.477 UTC 0e3d3e4f-c96b-4056-81b4-10003bad339a 2012-07-06 20:42:33.509 UTC 058b87a4-6ded-4a03-803c-ea5fab05c061 2012-07-07 05:32:19.781 UTC 335e3ef1-e61e-490a-8110-72c6122526d1 2012-07-02 20:31:20.886 UTC e7777b71-e9c8-402a-ad45-892543e1548e 2012-07-19 08:41:11.374 UTC 23c2d372-0ce9-4c83-bf11-dd9dd979b7d0 2012-07-07 08:16:22.148 UTC 82bb6d1c-58b5-4271-9378-4d98f95b890f 2012-07-02 15:40:30.646 UTC 19fd90e9-479f-46ee-9ef8-ad9597a5bd65 2012-07-07 08:01:19.335 UTC fdd84a52-b2f0-40d4-9b51-973952497ccf 2012-12-13 18:55:09.351 UTC 58d102b5-6c93-4bc9-9be7-c15f2cbca3d5 2012-07-02 14:40:00.370 UTC bae2c552-3b54-41f1-9871-af87641ff65a 2012-07-06 06:33:17.840 UTC d05f0b18-8733-4044-945c-1a902d3c4131 2012-07-02 20:37:19.193 UTC b97ee31d-9cc4-4a1b-a0e6-a0b46bda73fa 2012-07-02 20:33:45.799 UTC The Metagenomic Traits Statistical Analysis workflow computes the multivariate statistics related to the community traits outlined in Barberan et al. 2012 "Exploration of community traits as ecological markers in microbial metagenomes". The traits included in the statistical analyses range from GC content to functional diversity, and deliver a valuable set of ecological markers in order discriminate between habitats or geographic locations. Furthermore, intertrait relationships can be used as habitat descriptors or indicators of artefacts during sample processing. Overall, these metagenomics community traits approach, here combined in a single workflow, helps to interpret metagenomics data to gain a full understanding of microbial community patterns in a rigorous ecological framework. 2012-12-20 11:23:51.52 UTC e45d15ab-20f6-4583-bcbc-145675a96492 2012-07-03 10:48:56.691 UTC 52a5b559-5cb3-4c68-ab7f-d1f71f44367b 2012-07-06 22:36:23.283 UTC ce5ac09f-4435-40d1-a45e-76a64849b5cb 2012-07-07 08:45:08.989 UTC f1d91779-7926-4f17-a680-ab64a5eba249 2012-07-02 14:08:42.477 UTC 8b2a2987-c919-4cb7-8fe4-7abc2ab7f52e 2012-07-02 23:23:38.507 UTC 39a605a0-9f16-4bc8-9c35-5713f32baceb 2012-07-03 11:20:34.42 UTC 183cfe7b-e1c4-4866-b38a-240cb34903c2 2012-07-06 09:26:13.288 UTC f469ff10-9342-4a08-994c-5a6bfb12ba25 2012-12-09 22:35:57.526 UTC e1e28467-8407-4892-af9e-88cdbef402f3 2012-12-13 19:01:53.87 UTC 5bc7a0fc-bb62-4a32-8624-72ef00e4694a 2012-07-03 16:04:59.125 UTC 31acdc4b-202c-4fc4-98de-b7c24d125681 2012-12-13 18:49:21.430 UTC 888c79ed-63be-42ba-88a1-050ac204c30e 2012-07-06 14:35:18.742 UTC bc25cbc7-ca56-4260-969c-69cd0963dfe2 2012-07-05 07:17:02.529 UTC d1e8b09a-aab7-4be0-995d-0a64c3a01a09 2012-07-02 15:10:28.607 UTC 67d58bf1-ebd0-4204-ab00-f6ba8107cdac 2012-07-07 07:21:27.920 UTC b03cc3ce-eb30-4486-8a12-67e93197ccda 2012-07-05 07:44:18.529 UTC fa2cb0ae-2098-4cf5-b3d7-83e05d24a59c 2012-07-02 21:42:05.116 UTC cff5bb58-0317-4b06-b0d3-7f5a546cf0dd 2012-12-20 11:23:52.515 UTC e2118f6f-a91b-4d1b-8e99-69e32e4f98ec 2012-07-02 21:32:51.460 UTC 7b33ee4d-c640-4d56-be18-224cd6c87f7c 2012-07-02 21:25:01.841 UTC 7d55c763-29ab-4225-9827-9466983285c9 2012-07-06 16:08:25.340 UTC b3f76ba2-211b-4fca-993a-9832f0a24b4b 2012-07-07 06:15:30.310 UTC 2694dd5b-74e7-4f59-a235-3e2fa8868921 2012-07-03 11:14:34.807 UTC 1c1824ed-82ec-4580-960e-97c2b24d4b8c 2012-07-04 23:05:33.121 UTC 43d795a4-bf57-4666-b8f1-4ed03ea0ff5a 2012-07-02 15:05:08.971 UTC 8fa3dd51-7c0e-412d-9d9c-d393dc81cfc9 2012-07-02 21:53:11.310 UTC 5c5367e0-2b8c-4350-bb3a-2c7a173e60eb 2012-12-19 23:03:21.114 UTC 07f662bc-cdea-48b5-853b-afa763b78166 2012-07-05 07:55:45.85 UTC 4f239021-b83c-4260-90b5-0fc131bc117e 2012-07-03 10:49:49.177 UTC 1d3c52e1-9877-4ee2-b9d1-a897345bf80c 2012-07-06 22:02:29.366 UTC 105c2833-5c88-40a4-af40-1cb431cafee8 2012-07-07 09:09:16.986 UTC 7dc55dce-00dd-4722-a30b-772477d68cd3 2012-07-02 14:32:32.731 UTC 3a7e0969-0f6b-45d5-831a-56141edc00b2 2012-07-06 20:00:03.824 UTC 75400c69-bf7e-47da-a166-54a8e129cab9 2012-07-02 21:16:00.388 UTC 5c9dcf60-ff50-486c-91ae-06f189c63309 2012-07-03 07:12:19.721 UTC 0b1fa114-8ca4-4a9e-9c84-5213f15c9f41 2012-07-06 08:34:31.107 UTC 67699f1e-2e37-466b-ab90-409b80195e89 2012-12-13 18:32:25.432 UTC 9702248c-e155-4697-b0c8-d861248fea77 2012-07-06 06:29:39.54 UTC cf5bb1fd-d7d3-4778-be52-774329bd148d 2012-07-07 09:12:01.759 UTC 7c8e4c28-3c63-4876-82a6-e594175cd376 2012-12-13 18:40:13.746 UTC 5d16a869-dc48-4bc4-8889-781cbfe29793 2012-07-02 21:51:04.492 UTC 2bde7ef0-fb24-4b71-a4f5-f5b58d7c3e5b 2012-07-06 16:44:15.166 UTC cfe1710a-5e56-4564-98cd-77dbe9cd1811 2012-07-03 07:16:47.707 UTC 89506d36-1408-40ca-8420-c785fbbe1a2f 2012-07-06 21:44:58.232 UTC 44d039ba-9cc5-44fc-8bf3-965a21f3a9b7 2012-07-05 07:50:40.993 UTC b2f57d22-eb6f-495d-89d7-754f46c24ad1 2012-07-06 09:51:54.796 UTC 078e81a3-845f-4b7e-9fed-4306c5940de2 2012-07-07 09:15:48.869 UTC 59d9507d-75ac-4345-a050-b439269e3805 2012-07-07 07:54:08.63 UTC d61e314b-7563-4b28-ad28-6b3438a7662f 2012-12-07 09:56:10.983 UTC 05c61c57-eddb-4698-9b24-92705539c045 2012-07-07 09:18:30.93 UTC e6ac3542-ace7-4b66-8857-eddd8c54fe04 2012-07-02 15:39:54.314 UTC 24c76c2b-b96e-4a93-b843-83fa869f653e 2012-07-07 12:47:52.111 UTC 59b441d3-f2ea-4679-b67d-39de72843be5 2012-07-06 15:07:15.42 UTC d2b08d18-9e1f-4f4d-a5b6-7919c59d1397 2012-07-03 10:54:57.619 UTC 9dfb0ddb-08a4-4c40-8288-32a5ad3a9b62 2012-07-07 07:13:32.712 UTC 14f74e94-58a2-4abf-8f30-cb8fc3e02b07 2012-07-06 14:38:24.561 UTC 02ffa3cf-95e7-4649-b88e-5b6d00c44e49 2012-07-07 09:29:10.86 UTC fca7120b-7540-49b3-a415-7add23a36617 2012-07-06 08:29:49.524 UTC c218f347-23b5-4553-9bd7-1864e609cb4a 2012-07-04 22:48:18.175 UTC 6995184d-181d-4009-bddb-10eba0a15551 2012-07-07 15:31:42.540 UTC 3132b588-475a-46a2-9d74-24e119a8660e 2012-12-17 15:10:10.503 UTC 8a9b0303-cf3b-493f-81f7-85cf3866a857 2012-07-02 14:42:37.41 UTC 473374ba-fead-4e1b-ba3f-26e3d81b57ea 2012-07-02 14:26:54.981 UTC 26f0d58e-abdb-4359-8d5d-c9fffff4d3ba 2012-07-04 22:52:07.159 UTC d2d51ce0-01ca-4179-a9e1-49cb1054875c 2012-12-14 18:11:56.318 UTC 1a959f6b-e82f-4679-9a15-86dbda6c0e44 2012-07-02 21:36:58.365 UTC ecc8a85f-ee35-46c3-8f4c-42a86b89b76a 2012-12-09 23:08:40.556 UTC 2ddd7044-346a-46bb-b207-50f5571b15a1 2012-07-07 14:05:05.730 UTC d5452e25-4bc8-4c10-ab2b-39231cd2d0c8 2012-07-02 15:06:55.478 UTC 20cdb20d-62de-40e8-baa1-c08ec437aada 2012-07-02 21:16:30.691 UTC 691f42f0-86ac-4f51-83f9-c18c490d404a 2012-07-03 08:58:20.23 UTC 78d43e72-3869-4299-ab35-bc54536c94c1 2012-07-06 21:57:53.580 UTC 292a9aae-e341-40c8-ae93-05fe3fa5626e 2012-12-13 18:42:14.973 UTC 15288a44-cd85-4ea9-8806-c103ae2c216b 2012-12-20 11:19:04.782 UTC Workflow11traitsPCAlog00filePath00prefix00pcaLog00funcMantel00phyloMantel00traitsSummary00phyloNmdsLog00funcNmdsLog00phyloNdms00funcNmds00traitsPCAlogpcaLogfuncMantelphyloManteltraitsSummaryfuncNmdsLogphyloNmdsLogtraitsPcaLogWriterfilecontents0outputFile0prefix0filePath0outputFile00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity outputFile 0 'text/plain' java.lang.String true filecontents 0 'text/plain' java.lang.String true encoding 0 'text/plain' java.lang.String true filePath 0 text/plain java.lang.String true prefix 0 text/plain java.lang.String true outputFile 0 0 workflow net.sourceforge.taverna.scuflworkers.io.TextFileWriter UserNameHere 2012-07-07 08:23:40.430 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvoketraitsPcaLogFhvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity pcalog.txt net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokepcaLogWriterfilecontents0filePath0outputFile0prefix0outputFile00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity outputFile 0 'text/plain' java.lang.String true filecontents 0 'text/plain' java.lang.String true encoding 0 'text/plain' java.lang.String true filePath 0 text/plain java.lang.String true prefix 0 text/plain java.lang.String true outputFile 0 0 workflow net.sourceforge.taverna.scuflworkers.io.TextFileWriter UserNameHere 2012-07-07 08:23:40.430 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokepcaLogFhvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity traitsPCAlog.txt net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokefunMantelWriterfilecontents0filePath0prefix0outputFile0outputFile00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity outputFile 0 'text/plain' java.lang.String true filecontents 0 'text/plain' java.lang.String true encoding 0 'text/plain' java.lang.String true filePath 0 text/plain java.lang.String true prefix 0 text/plain java.lang.String true outputFile 0 0 workflow net.sourceforge.taverna.scuflworkers.io.TextFileWriter UserNameHere 2012-07-07 08:23:40.430 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokefunMantelFhvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity functionalMantel.txt net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokephyloMantelWriteroutputFile0filecontents0filePath0prefix0outputFile00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity outputFile 0 'text/plain' java.lang.String true filecontents 0 'text/plain' java.lang.String true encoding 0 'text/plain' java.lang.String true filePath 0 text/plain java.lang.String true prefix 0 text/plain java.lang.String true outputFile 0 0 workflow net.sourceforge.taverna.scuflworkers.io.TextFileWriter UserNameHere 2012-07-07 08:23:40.430 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokephyloMantelFhvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity phylogeneticMantel.txt net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvoketraitsSummaryoutputFile0prefix0filecontents0filePath0outputFile00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity outputFile 0 'text/plain' java.lang.String true filecontents 0 'text/plain' java.lang.String true encoding 0 'text/plain' java.lang.String true filePath 0 text/plain java.lang.String true prefix 0 text/plain java.lang.String true outputFile 0 0 workflow net.sourceforge.taverna.scuflworkers.io.TextFileWriter UserNameHere 2012-07-07 08:23:40.430 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvoketraitsSummaryFhvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity traitsSummary.txt net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokephyloNmdsLogWriterfilecontents0filePath0prefix0outputFile0outputFile00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity outputFile 0 'text/plain' java.lang.String true filecontents 0 'text/plain' java.lang.String true encoding 0 'text/plain' java.lang.String true filePath 0 text/plain java.lang.String true prefix 0 text/plain java.lang.String true outputFile 0 0 workflow net.sourceforge.taverna.scuflworkers.io.TextFileWriter UserNameHere 2012-07-07 08:23:40.430 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokephyloNmdsLogfFhvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity phylogeneticNmdsLog.txt net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokefuncNmdsLogWriterfilecontents0filePath0prefix0outputFile0outputFile00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity outputFile 0 'text/plain' java.lang.String true filecontents 0 'text/plain' java.lang.String true encoding 0 'text/plain' java.lang.String true filePath 0 text/plain java.lang.String true prefix 0 text/plain java.lang.String true outputFile 0 0 workflow net.sourceforge.taverna.scuflworkers.io.TextFileWriter UserNameHere 2012-07-07 08:23:40.430 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokefuncNmdsLogFhvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity functionalNmdsLog.txt net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokephyloNmdsWriterfilecontents0filePath0outputFile0prefix0net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity outputFile 0 'text/plain' java.lang.String true filecontents 0 'text/plain' java.lang.String true encoding 0 'text/plain' java.lang.String true filePath 0 text/plain java.lang.String true prefix 0 text/plain java.lang.String true outputFile 0 0 workflow net.sourceforge.taverna.scuflworkers.io.TextFileWriter UserNameHere 2012-07-07 08:23:40.430 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokephyloNmdsFhvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity phylogeneticNMDS.txt net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokefuncNmdsWriterprefix0filePath0filecontents0outputFile0net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity outputFile 0 'text/plain' java.lang.String true filecontents 0 'text/plain' java.lang.String true encoding 0 'text/plain' java.lang.String true filePath 0 text/plain java.lang.String true prefix 0 text/plain java.lang.String true outputFile 0 0 workflow net.sourceforge.taverna.scuflworkers.io.TextFileWriter UserNameHere 2012-07-07 08:23:40.430 UTC net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokefuncNmdsFhvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity functionalNMDS.txt net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvoketraitsPcaLogWriterfilecontentstraitsPCAlogtraitsPcaLogWriteroutputFiletraitsPcaLogFhvaluetraitsPcaLogWriterprefixprefixtraitsPcaLogWriterfilePathfilePathpcaLogWriterfilecontentspcaLogpcaLogWriterfilePathfilePathpcaLogWriteroutputFilepcaLogFhvaluepcaLogWriterprefixprefixfunMantelWriterfilecontentsfuncMantelfunMantelWriterfilePathfilePathfunMantelWriterprefixprefixfunMantelWriteroutputFilefunMantelFhvaluephyloMantelWriteroutputFilephyloMantelFhvaluephyloMantelWriterfilecontentsphyloMantelphyloMantelWriterfilePathfilePathphyloMantelWriterprefixprefixtraitsSummaryoutputFiletraitsSummaryFhvaluetraitsSummaryprefixprefixtraitsSummaryfilecontentstraitsSummarytraitsSummaryfilePathfilePathphyloNmdsLogWriterfilecontentsphyloNmdsLogphyloNmdsLogWriterfilePathfilePathphyloNmdsLogWriterprefixprefixphyloNmdsLogWriteroutputFilephyloNmdsLogfFhvaluefuncNmdsLogWriterfilecontentsfuncNmdsLogfuncNmdsLogWriterfilePathfilePathfuncNmdsLogWriterprefixprefixfuncNmdsLogWriteroutputFilefuncNmdsLogFhvaluephyloNmdsWriterfilecontentsphyloNdmsphyloNmdsWriterfilePathfilePathphyloNmdsWriteroutputFilephyloNmdsFhvaluephyloNmdsWriterprefixprefixfuncNmdsWriterprefixprefixfuncNmdsWriterfilePathfilePathfuncNmdsWriterfilecontentsfuncNmdsfuncNmdsWriteroutputFilefuncNmdsFhvaluetraitsPCAlogtraitsPcaLogWriteroutputFilepcaLogpcaLogWriteroutputFilefuncMantelfunMantelWriteroutputFilephyloMantelphyloMantelWriteroutputFiletraitsSummarytraitsSummaryoutputFilefuncNmdsLogfuncNmdsLogWriteroutputFilephyloNmdsLogphyloNmdsLogWriteroutputFile 8ef82481-0868-4955-93a0-35a5014ece5a 2012-07-07 08:16:13.43 UTC 9452260f-329e-4611-b006-0c9b247e9362 2012-07-07 14:46:57.991 UTC e23e6fbb-091f-44a4-b72c-24cd9de30a02 2012-07-07 08:04:28.403 UTC 158c3421-0c4a-442e-94b9-3ffba2c0363b 2012-07-07 14:48:30.888 UTC c3187e79-8cd4-4aba-8070-67bdc4b943cd 2012-07-07 08:32:49.44 UTC 6245cf71-fb42-4d06-9c49-803498012fa1 2012-07-07 08:09:33.486 UTC 6bdabee4-01bb-4af4-b371-0eb87b99e05b 2012-07-07 08:42:47.191 UTC 76065ad9-d221-4180-a6c7-7db2682c1111 2012-07-07 15:06:11.302 UTC 83d2abf8-6277-4dd6-b94e-80f56aa95709 2012-07-07 08:23:44.429 UTC Workflow20funcNMDS00phyloNMDS00filePath00biplot00bivariate00pcaPlot00prefix00pcaPlotfuncNMDSphyloNMDSbivariatePlotbiplotpcaPlotWriterfilePath0f0fileName0prefix0fileContents00net.sf.taverna.t2.activitiesbeanshell-activity1.4net.sf.taverna.t2.activities.beanshell.BeanshellActivity f 0 text/plain java.lang.String true filePath 0 text/plain java.lang.String true fileName 0 text/plain java.lang.String true prefix 0 text/plain java.lang.String true fileContents 0 0 workflow net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokebivariateWriterfilePath0f0fileName0prefix0fileContents00net.sf.taverna.t2.activitiesbeanshell-activity1.4net.sf.taverna.t2.activities.beanshell.BeanshellActivity f 0 text/plain java.lang.String true filePath 0 text/plain java.lang.String true fileName 0 text/plain java.lang.String true prefix 0 text/plain java.lang.String true fileContents 0 0 workflow net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokephyloNMDSWriterf0filePath0fileName0prefix0fileContents00net.sf.taverna.t2.activitiesbeanshell-activity1.4net.sf.taverna.t2.activities.beanshell.BeanshellActivity f 0 text/plain java.lang.String true filePath 0 text/plain java.lang.String true fileName 0 text/plain java.lang.String true prefix 0 text/plain java.lang.String true fileContents 0 0 workflow net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokefuncNmdsFhvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity functionalNMDS.pdf net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokebivariateFhvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity bivariatePlot.pdf net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokePcaPlotvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity PCAplot.pdf net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokebiPlotFhvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity biPlot.pdf net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 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