Create_votable_from_FileVotablePath00 /home/julian/Documents/wf4ever/showcase61.2goldenExampler/2GE/workflows/cat_sex_total_noback.votable 2012-07-23 10:54:52.994 UTC Precedence00ColumnNameWithConfigFile00 galfit_exp 2012-07-23 10:54:36.665 UTC VotableWithnewColumnsGalfitVotableCreateVotableFromGalfitConfigFilescolumnNameWithConfigFile0FileVotablePath0resultVotable00 Given a votable that contains a column whose values are galfit files. It opens the file, extracts information and creates a votable. 2012-09-07 12:46:01.280 UTC net.sf.taverna.t2.activitiesbeanshell-activity1.4net.sf.taverna.t2.activities.beanshell.BeanshellActivity columnNameWithConfigFile 0 text/plain java.lang.String true FileVotablePath 0 text/plain java.lang.String true resultVotable 0 0 workflow stil.jar net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketjoinvotable10votable20outputFileOut00org.purl.wf4ever.astrotavernastilts-activity0.9org.purl.wf4ever.astrotaverna.tjoin.TjoinActivity String net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeRead_FilefilePath0string00net.sf.taverna.t2.activitiesbeanshell-activity1.4net.sf.taverna.t2.activities.beanshell.BeanshellActivity filePath 0 text/plain java.lang.String true string 0 0 workflow net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeCreateVotableFromGalfitConfigFilescolumnNameWithConfigFileColumnNameWithConfigFileCreateVotableFromGalfitConfigFilesFileVotablePathFileVotablePathtjoinvotable1Read_Filestringtjoinvotable2CreateVotableFromGalfitConfigFilesresultVotableRead_FilefilePathFileVotablePathVotableWithnewColumnstjoinoutputFileOutGalfitVotableCreateVotableFromGalfitConfigFilesresultVotable c2e12a7c-cfa9-4cff-a98a-9296b6079f67 2012-08-21 10:46:20.898 UTC 9028041f-6581-4ba1-a8cc-dc580714d3c6 2012-07-23 10:03:28.964 UTC df2af2fa-e6e3-41f6-8b7d-81981d8f0204 2012-07-23 10:41:24.65 UTC 0c7ac8ed-fd00-4cdd-897a-ff4e1805d860 2012-07-23 10:01:20.585 UTC 602c0d95-8f35-4153-a001-2a6b316e8e6d 2012-07-23 09:11:10.375 UTC eaba1bd1-8b89-4b96-8293-b7807912f69c 2012-08-21 09:40:25.244 UTC 05001173-a4c6-4e8d-a6a0-87ff08cb1854 2012-07-23 11:03:32.180 UTC 0bfd956a-00b8-4b2e-a3ed-92fac0d04604 2012-07-23 10:05:31.602 UTC 12c0be0d-710e-4ad8-b755-ddb83017598f 2012-07-26 12:26:22.181 UTC b1a215cd-9287-4b27-b68a-50e567d65e53 2012-07-23 10:51:10.168 UTC ca5d4e9c-c0ec-4dd9-94d9-4933a00a4efc 2012-07-26 12:23:24.384 UTC aad45e8e-45d0-43e3-aac9-d035729a752b 2012-09-07 12:46:18.697 UTC f10c999b-4267-45b1-b536-9f5f4e2dde12 2012-07-23 10:39:54.643 UTC Create votable from galfit results 2012-07-26 12:23:06.932 UTC 2ab3e59f-5ce4-4686-a06e-83c71fbaecb7 2012-07-23 10:44:37.451 UTC 08afb3c6-0687-4388-8e3c-ed2e5085e05e 2012-07-23 10:45:33.292 UTC 4a6a49fc-2c90-40f5-b2db-2be6724eaad6 2012-07-23 10:54:57.683 UTC 0b33517d-f670-4460-ae27-34236b7c1910 2012-07-30 10:46:47.455 UTC caf0ebc2-8869-4f7e-89fa-4009a3270a3b 2012-07-23 10:52:57.522 UTC 13f073e8-1524-4fc4-9421-b0ec0d605ad9 2012-07-23 10:48:53.303 UTC Julian Garrido 2012-09-07 12:46:15.542 UTC 89eac41a-5d33-4ade-bde5-2b6022c61238 2012-07-23 10:43:40.272 UTC 1f1606b2-f416-41da-bf7b-f97f937404f8 2012-07-23 11:08:12.415 UTC The workflow creates a votable from the results provided by galfit. It returns this table and an aditional table that is joined to the input table. It requires a votable that contains a column with the file name resulting from running galfit and such files must be accesible from taverna. It uses astrotaverna plugin (http://wf4ever.github.com/astrotaverna/) and it has a dependency on stil library (http://www.star.bris.ac.uk/~mbt/stil/). 2012-07-26 12:26:12.678 UTC 0747de1b-8027-4d37-b42a-28064d744b67 2012-07-23 11:05:00.361 UTC cab519f8-0cf2-49d7-8893-a42580bc7bcc 2012-07-23 11:25:04.897 UTC 18249ea5-0878-45bb-9766-e11b2ec77418 2012-07-23 10:49:55.51 UTC b53c75a1-54ac-422f-bf73-0d666fe76d04 2012-07-23 10:46:44.268 UTC