metabolic_pathway.xml

Created: 2008-07-12 10:13:37 Last updated: 2008-07-12 10:13:50

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A list of Kegg entires are supplied to the Kegg database which then retrieves the associated metabolic pathways for each entry supplied. e.g. Ids takes in a value of 351, whilst abbr takes in a value of hsa. Thus hsa:351 corresponds to neurodegenerative disorders and alzheimers disease pathways. [fisherp@cs.man.ac.uk]

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Workflow Components

Inputs (2)

Name	Description
Ids
abbr

Processors (3)

Name	Type	Description
GETIMAGE	local
KEGGBASEURL	stringconstant
GETPATHWAYS	arbitrarywsdl

Beanshells (0)

Outputs (1)

Name	Description
KEGG_pathways

Links (5)

Source	Sink
GETPATHWAYS:return	GETIMAGE:url
Ids	GETPATHWAYS:oids
KEGGBASEURL:value	GETIMAGE:base
abbr	GETPATHWAYS:abbr
GETIMAGE:image	KEGG_pathways

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Antoon Goderis

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Paul Fisher

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metabolic_pathway.xml

Created by Antoon Goderis on Saturday 12 July 2008 10:13:37 (UTC)

Last edited by Antoon Goderis on Saturday 12 July 2008 10:13:50 (UTC)