interpro_url.xml

Created: 2008-07-12 10:03:35 Last updated: 2008-07-12 20:19:04

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An example of how a more complex workflow can federate multiple resources to perform data mining. In this case a single input data item in the form of a probe set identifier is cross referenced to data sets in multiple locations to answer a kind of 'show me everything about this data' question.

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Workflow Components

Inputs (0)

Processors (6)

Name	Type	Description
REGEX_GROUP	stringconstant
INTERPRO_REGEX	stringconstant
INTERPRO_URL	stringconstant
INTERPRO_RESULT_FILTER	local
interpro_ids	stringconstant
CONCAT_INTERPRO_URL	local

Beanshells (0)

Outputs (1)

Name	Description
interproIDs

Links (6)

Source	Sink
INTERPRO_REGEX:value	INTERPRO_RESULT_FILTER:regex
INTERPRO_RESULT_FILTER:filteredlist	CONCAT_INTERPRO_URL:string2
INTERPRO_URL:value	CONCAT_INTERPRO_URL:string1
REGEX_GROUP:value	INTERPRO_RESULT_FILTER:group
interpro_ids:value	INTERPRO_RESULT_FILTER:stringlist
CONCAT_INTERPRO_URL:output	interproIDs

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Information Workflow Type

Taverna 1

Information Uploader

Antoon Goderis

Information License

All versions of this Workflow are licensed under:

Information Version 1 (of 1)

Information Credits (1)

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Paul Fisher

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benchmarks

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Paul Fisher workflows for benchmarks PR and CA2

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Information Statistics

1836 viewings

2000 downloads

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Version History

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interpro_url.xml

Created by Antoon Goderis on Saturday 12 July 2008 10:03:35 (UTC)

Last edited by Antoon Goderis on Saturday 12 July 2008 20:19:04 (UTC)

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