[untitled]

Created: 2011-10-06 03:21:19 Last updated: 2011-10-06 03:22:29

Download Workflow

This workflow ...tbc

Preview

Run

Run this Workflow in the Taverna Workbench...

Option 1:

Copy and paste this link into File > 'Open workflow location...'
http://www.myexperiment.org/workflows/2468/download?version=1
[ More Info Expand ]

Workflow Components

Authors (0)

Titles (0)

Descriptions (0)

Dependencies (0)

Inputs (1)

Name	Description
xml_in

Processors (18)

Name	Type	Description
lat_group_2	stringconstant	Value 0
regex_north_lat_from_loc	stringconstant	Value \d\d-\d\dN
regex_dd.dd	stringconstant	Value \d\d.\d\d
regex	stringconstant	Value -
dot	stringconstant	Value .
Merge_String_List_to_a_String	localworker	Script String seperatorString = "\n"; if (seperator != void) { seperatorString = seperator; } StringBuffer sb = new StringBuffer(); for (Iterator i = stringlist.iterator(); i.hasNext();) { String item = (String) i.next(); sb.append(item); if (i.hasNext()) { sb.append(seperatorString); } } concatenated = sb.toString();
lat_group_1	stringconstant	Value 0
Filter_list_of_strings_extracting_regex_match_passing_blanks	localworker	Script import java.util.regex.*; filteredlist = new ArrayList(); Pattern thePat = Pattern.compile(regex); int theGroup = Integer.parseInt(group); for (Iterator i = stringlist.iterator(); i.hasNext();) { String item = (String) i.next(); String blank = ""; Matcher matcher = thePat.matcher(item); if (matcher.find()) { filteredlist.add(matcher.group(theGroup)); } else { filteredlist.add(blank); } }
Split_string_into_string_list_by_regex_pass_blanks	localworker	Script List split = new ArrayList(); if (!string.equals("")) { String regexString = ","; if (regex != void) { regexString = regex; } String[] result = string.split(regexString); for (int i = 0; i < result.length; i++) { split.add(result[i]); } } else if (string.equals("")) { split.add(string); }
Filter_list_of_strings_extracting_regex_match_passing_blanks_2	localworker	Script import java.util.regex.*; filteredlist = new ArrayList(); Pattern thePat = Pattern.compile(regex); int theGroup = Integer.parseInt(group); for (Iterator i = stringlist.iterator(); i.hasNext();) { String item = (String) i.next(); String blank = ""; Matcher matcher = thePat.matcher(item); if (matcher.find()) { filteredlist.add(matcher.group(theGroup)); } else { filteredlist.add(blank); } }
Concatenate_strings_pass_blanks	localworker	Script if (string2.equals("")){ output = string2; } else{ output = string1 + string2; }
Filter_list_of_strings_extracting_regex_match_passing_blanks_3	localworker	Script import java.util.regex.*; filteredlist = new ArrayList(); Pattern thePat = Pattern.compile(regex); int theGroup = Integer.parseInt(group); for (Iterator i = stringlist.iterator(); i.hasNext();) { String item = (String) i.next(); String blank = ""; Matcher matcher = thePat.matcher(item); if (matcher.find()) { filteredlist.add(matcher.group(theGroup)); } else { filteredlist.add(blank); } }
Filter_list_of_strings_extracting_regex_match_passing_blanks_4	localworker	Script import java.util.regex.*; filteredlist = new ArrayList(); Pattern thePat = Pattern.compile(regex); int theGroup = Integer.parseInt(group); for (Iterator i = stringlist.iterator(); i.hasNext();) { String item = (String) i.next(); String blank = ""; Matcher matcher = thePat.matcher(item); if (matcher.find()) { filteredlist.add(matcher.group(theGroup)); } else { filteredlist.add(blank); } }
regex_south_lat_from_loc	stringconstant	Value \d\d-\d\dS
Split_string_into_string_list_by_regex_pass_blanks_2	localworker	Script List split = new ArrayList(); if (!string.equals("")) { String regexString = ","; if (regex != void) { regexString = regex; } String[] result = string.split(regexString); for (int i = 0; i < result.length; i++) { split.add(result[i]); } } else if (string.equals("")) { split.add(string); }
Merge_String_List_to_a_String_2	localworker	Script String seperatorString = "\n"; if (seperator != void) { seperatorString = seperator; } StringBuffer sb = new StringBuffer(); for (Iterator i = stringlist.iterator(); i.hasNext();) { String item = (String) i.next(); sb.append(item); if (i.hasNext()) { sb.append(seperatorString); } } concatenated = sb.toString();
negative	stringconstant	Value -
Concatenate_two_strings	localworker	Script output = string1 + string2;

Beanshells (0)

Outputs (1)

Name	Description
latitude

Datalinks (25)

Source	Sink
dot:value	Merge_String_List_to_a_String:seperator
Split_string_into_string_list_by_regex_pass_blanks:split	Merge_String_List_to_a_String:stringlist
xml_in	Filter_list_of_strings_extracting_regex_match_passing_blanks:stringlist
regex_north_lat_from_loc:value	Filter_list_of_strings_extracting_regex_match_passing_blanks:regex
lat_group_1:value	Filter_list_of_strings_extracting_regex_match_passing_blanks:group
regex:value	Split_string_into_string_list_by_regex_pass_blanks:regex
Filter_list_of_strings_extracting_regex_match_passing_blanks:filteredlist	Split_string_into_string_list_by_regex_pass_blanks:string
Merge_String_List_to_a_String:concatenated	Filter_list_of_strings_extracting_regex_match_passing_blanks_2:stringlist
regex_dd.dd:value	Filter_list_of_strings_extracting_regex_match_passing_blanks_2:regex
lat_group_2:value	Filter_list_of_strings_extracting_regex_match_passing_blanks_2:group
Filter_list_of_strings_extracting_regex_match_passing_blanks_4:filteredlist	Concatenate_strings_pass_blanks:string2
negative:value	Concatenate_strings_pass_blanks:string1
xml_in	Filter_list_of_strings_extracting_regex_match_passing_blanks_3:stringlist
regex_south_lat_from_loc:value	Filter_list_of_strings_extracting_regex_match_passing_blanks_3:regex
lat_group_1:value	Filter_list_of_strings_extracting_regex_match_passing_blanks_3:group
Merge_String_List_to_a_String_2:concatenated	Filter_list_of_strings_extracting_regex_match_passing_blanks_4:stringlist
lat_group_2:value	Filter_list_of_strings_extracting_regex_match_passing_blanks_4:group
regex_dd.dd:value	Filter_list_of_strings_extracting_regex_match_passing_blanks_4:regex
Filter_list_of_strings_extracting_regex_match_passing_blanks_3:filteredlist	Split_string_into_string_list_by_regex_pass_blanks_2:string
regex:value	Split_string_into_string_list_by_regex_pass_blanks_2:regex
Split_string_into_string_list_by_regex_pass_blanks_2:split	Merge_String_List_to_a_String_2:stringlist
dot:value	Merge_String_List_to_a_String_2:seperator
Concatenate_strings_pass_blanks:output	Concatenate_two_strings:string1
Filter_list_of_strings_extracting_regex_match_passing_blanks_2:filteredlist	Concatenate_two_strings:string2
Concatenate_two_strings:output	latitude