Find_Orthologs_for_proteins_in_EnsemblensemblDataset00 Ensembl dataset name corresponding to the specie for protein ID. Look for Ensembl dataset names in http://www.biomart.org/biomart/martservice?type=datasets&mart=ensembl 2011-10-03 13:06:09.903 BST cfamiliaris_gene_ensembl 2011-10-03 13:06:23.607 BST idReference00 The reference database for the protein ID. Three options: ensembl, swissprot or trembl 2011-10-03 13:04:15.144 BST swissprot 2011-10-03 13:04:20.293 BST proteinId00 Protein identifier 2011-10-03 13:05:26.714 BST P41148 2011-10-03 13:05:39.355 BST orthologSpecie00 Chose in which specie you want to find the orthologs. i.e human, mouse, rabbit, yeast 2011-10-03 13:29:14.521 BST human 2011-10-03 13:29:26.745 BST esemblIdsummaryorthologIdhomologDnhomologDshomologPercIdhomologSubtypeorthologyTypehomologPercIdR1findOrthologsensemblDataset0idReference0proteinId0orthologSpecie0esemblId11summary11orthologId11homologDn11homologDs11homologPercId11homologSubtype11orthologyType11homologPercIdR111net.sf.taverna.t2.activitiesbeanshell-activity1.3net.sf.taverna.t2.activities.beanshell.BeanshellActivity proteinId 0 text/plain java.lang.String true ensemblDataset 0 text/plain java.lang.String true idReference 0 text/plain java.lang.String true orthologSpecie 0 text/plain java.lang.String true esemblId 1 1 orthologId 1 1 summary 1 1 orthologyType 1 1 homologSubtype 1 1 homologPercId 1 1 homologDs 1 1 homologDn 1 1 homologPercIdR1 1 1 workflow net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokefindOrthologsensemblDatasetensemblDatasetfindOrthologsidReferenceidReferencefindOrthologsproteinIdproteinIdfindOrthologsorthologSpecieorthologSpecieesemblIdfindOrthologsesemblIdsummaryfindOrthologssummaryorthologIdfindOrthologsorthologIdhomologDnfindOrthologshomologDnhomologDsfindOrthologshomologDshomologPercIdfindOrthologshomologPercIdhomologSubtypefindOrthologshomologSubtypeorthologyTypefindOrthologsorthologyTypehomologPercIdR1findOrthologshomologPercIdR1 6bee3311-a925-4b2a-97a5-739467310114 2011-10-03 12:09:51.33 BST 2ef536dd-cdb1-4fa3-8cf5-8212a61997a0 2011-10-03 12:06:16.676 BST d9aaeab1-bfa9-470d-b67f-f343a0b4d7e1 2011-10-03 12:38:52.231 BST Find Orthologs for proteins in Ensembl using biomart. 2011-10-03 14:30:04.502 BST 2e8f54ca-fd12-4fc9-9e82-64c1f20d6cf5 2011-10-03 13:40:55.63 BST daa115ca-e51a-4cc7-87c4-e69c096696e3 2011-10-03 14:20:31.564 BST 5b3c44be-aeb6-4f38-8848-09d55591423b 2011-10-03 12:36:48.913 BST 9cb3364c-ecac-4ace-a582-a7ff0dff6bfe 2011-10-03 14:13:53.920 BST 301a1e5a-6dce-4f0f-8143-550f6f3a4e9e 2011-10-03 14:30:21.548 BST 8cc9a4bc-cf28-4006-b4f9-06df4bc1e359 2011-10-03 12:31:50.682 BST 2103da72-c278-4324-aac1-0cb116ce5a5e 2011-10-03 12:09:06.260 BST af4aa296-86e1-4370-bb37-26ed804fb755 2011-10-03 12:33:45.480 BST Find Orthologs for proteins in Ensembl 2011-10-03 14:30:11.23 BST 81fa4e31-b146-4477-95d4-d4cfc3c13105 2011-10-03 12:29:26.247 BST 2a7e3b86-c22b-4537-b16e-61bbbf174035 2011-10-03 14:18:44.289 BST 4d6ffc53-ae22-4031-b0b8-5b095e417fb6 2011-10-03 12:07:30.808 BST 3303f135-a627-4085-8a44-da3f8ed0f485 2011-10-03 13:32:01.546 BST 29ead42b-22c8-43d2-a9b4-9b7cd9e6d3de 2011-10-03 12:31:11.58 BST f423ddfb-f8d1-4666-be18-253e30043b51 2011-10-03 14:15:01.845 BST 93712525-a7ed-4d2b-99f2-339241325f90 2011-10-03 14:21:39.955 BST 35e8c2eb-1a1e-4850-8214-c252477b9402 2011-10-03 12:03:23.564 BST 90d274ae-df5a-43aa-a839-4a97136cbf55 2011-10-03 14:04:40.257 BST 2f40c23b-aedd-49a1-9277-961586218a52 2011-10-03 13:30:36.691 BST 1bd93725-0340-421b-9112-e0c8fa6ffaca 2011-10-03 13:40:06.240 BST 41a01363-62ac-4836-9506-3d117133d0c0 2011-10-03 14:15:59.762 BST 74053ed6-b21e-4526-a1fa-7c82c4826e4a 2011-10-03 13:58:02.384 BST 2473d45e-7ecb-4a55-80db-5cd3e4b82da0 2011-10-03 13:35:45.810 BST Rafael C. Jimenez 2011-10-03 14:28:07.644 BST 9fdcc050-19d3-4e03-b760-253653d655a9 2011-10-03 13:06:36.75 BST 5ebb6474-9b08-4a1f-86d9-876346e36f4e 2011-10-03 14:27:18.513 BST