Use_UniProt_to_retrieve_InterPro_dataparsed_uniprot00
The file location of the parsed Uniprot file (see http://www.myexperiment.org/workflows/26.html).
2011-04-01 11:53:45.625 BST
EB_Eye_ResultsInterPro_ResultsEntry_Id0Domain0getEntry_output_entryValues11net.sf.taverna.t2.activitiesdataflow-activity1.2net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeget_identifiers_from_uniprot_2_2parsed_uniprot0identifier_name0out111net.sf.taverna.t2.activitiesbeanshell-activity1.2net.sf.taverna.t2.activities.beanshell.BeanshellActivity
workflow
java.lang.String
true
parsed_uniprot
0
text/plain
java.lang.String
true
identifier_name
0
text/plain
1
out1
1
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketo_Lower_Case_2in10out100net.sf.taverna.t2.activitiesbeanshell-activity1.2net.sf.taverna.t2.activities.beanshell.BeanshellActivity
workflow
java.lang.String
true
in1
0
text/plain
0
out1
0
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_Stringgo_ids1go_defs1concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.2net.sf.taverna.t2.activities.localworker.LocalworkerActivity
org.embl.ebi.escience.scuflworkers.java.StringListMerge
workflow
java.lang.String
true
go_defs
1
l('text/plain')
java.lang.String
true
seperator
0
'text/plain'
java.lang.String
true
go_ids
1
text/plain
0
concatenated
0
UserNameHere
2011-03-30 16:27:49.467 BST
UserNameHere
2011-03-30 16:25:55.280 BST
UserNameHere
2011-03-30 16:29:15.546 BST
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_String_2stringlist1concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.2net.sf.taverna.t2.activities.localworker.LocalworkerActivity
org.embl.ebi.escience.scuflworkers.java.StringListMerge
workflow
java.lang.String
true
stringlist
1
l('text/plain')
java.lang.String
true
seperator
0
'text/plain'
0
concatenated
0
'text/plain'
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeInterProvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.2net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
InterPro
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeInterPro_ResultsEntry_IdInterPro_ResultsDomainget_identifiers_from_uniprot_2_2parsed_uniprotget_identifiers_from_uniprot_2_2identifier_nameto_Lower_Case_2in1Merge_String_List_to_a_Stringgo_idsMerge_String_List_to_a_Stringgo_defsMerge_String_List_to_a_String_2stringlistEB_Eye_Results
Use UniProt to retrieve InterPro data
2011-04-01 11:51:41.323 BST
fda20a14-917b-454a-a88e-4d4cf58e24c6
2011-03-28 18:34:50.789 BST
6845039f-9b62-49dc-ac9d-8ba4deeafde0
2011-04-01 11:53:15.561 BST
Used parsed Uniprot results (see workflow
2011-04-01 11:52:07.242 BST
4ed40fd8-b13c-4aa2-8977-329988763674
2011-03-28 17:56:58.784 BST
Used parsed Uniprot results (see workflow http://www.myexperiment.org/workflows/26.html) to retrieve results about the protein from InterPro.
2011-04-01 11:53:15.420 BST
33afbd5c-d9a6-4e58-a255-ac744742875a
2011-03-28 18:38:03.893 BST
2011-03-28 16:28:59.317 BST
fb843096-2675-4579-9a51-05f43e15ba79
2011-03-28 17:54:29.330 BST
7f7920cf-259e-4947-8a28-bbd0bf0d5de4
2011-03-28 18:59:44.143 BST
2c33a9b5-8e1e-449a-9bf3-07b1ad48beab
2011-03-30 16:41:33.953 BST
ff900e9f-7b8d-43fc-be47-cc638b4266d4
2011-03-28 19:00:51.178 BST
1752f7dd-badb-4e4a-a2f1-d50327f80d60
2011-03-30 16:46:50.149 BST
11d4d655-87f9-4a31-88f1-eef56a3a03ee
2011-03-28 16:58:53.309 BST
7b3873e1-cd30-4e5c-ab3a-4e0178648eb6
2011-03-30 16:43:19.253 BST
2011-04-01 11:51:09.357 BST
9fedbdd2-dde5-4b08-ab50-80991ea7c41c
2011-03-28 18:55:56.909 BST
f5b50570-afa2-4768-a298-a7bd35e90e11
2011-03-28 19:28:47.180 BST
3117ba0d-f09f-4956-ad74-7761dbf998d9
2011-03-28 19:18:13.311 BST
d7ce24f5-f65b-4b2b-8500-6d35cf027d1c
2011-03-28 19:02:12.80 BST
5f08104a-de65-423f-b532-dc7eb89c28ce
2011-03-28 16:39:56.913 BST
2a76c6a1-b3d1-4ca2-9459-ddf394593250
2011-04-01 11:53:46.891 BST
eccaf02b-b85b-4894-9974-c4c49a168673
2011-03-30 16:40:30.44 BST
427f85e8-da08-4e29-800f-8479992b79e5
2011-03-30 16:48:37.456 BST
5bc429c4-927b-4d7e-b4c8-9f8cd17838b7
2011-03-30 17:22:18.272 BST
416a5592-70f9-4c5f-af15-397bd21af3cb
2011-03-28 19:15:54.482 BST
ef9de97c-ca76-479e-b933-d396f043e138
2011-03-28 16:39:02.585 BST
f5c68892-7c8c-4bba-96cf-6e4094272de2
2011-03-28 18:51:46.105 BST
Untitled workflow #14
2011-03-28 16:28:59.317 BST
2011-03-28 16:28:59.317 BST
acd0a40b-a688-473f-8618-1bdbd2046096
2011-03-28 16:33:17.871 BST
7ae7f0a1-1f28-48e1-8c41-7c6da1587e3d
2011-03-28 16:34:34.815 BST
c88315af-4ce4-43fb-b48d-45cc0e9424b2
2011-03-28 18:57:59.270 BST
2011-04-01 11:51:41.635 BST
Workflow40Entry_Id00Domain00getEntry_output_entryValuesgetEntryparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.2net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://www.ebi.ac.uk/ebisearch/service.ebi?wsdl
getEntry
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetEntry_inputentry0fields1domain0output00net.sf.taverna.t2.activitieswsdl-activity1.2net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getEntry" name="parameters" qname="{http://www.ebi.ac.uk/EBISearchService}getEntry"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="domain" qname="{http://www.ebi.ac.uk/EBISearchService}>getEntry>domain" /><s:basetype optional="false" unbounded="false" typename="string" name="entry" qname="{http://www.ebi.ac.uk/EBISearchService}>getEntry>entry" /><s:arraytype optional="false" unbounded="false" wrapped="true" typename="ArrayOfString" name="fields" qname="{http://www.ebi.ac.uk/EBISearchService}>getEntry>fields"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:extensions>
false
domain
0
'text/plain'
false
entry
0
'text/plain'
false
fields
1
l('text/plain')
0
output
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetEntry_outputinput0entryValues11net.sf.taverna.t2.activitieswsdl-activity1.2net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getEntryResponse" name="parameters" qname="{http://www.ebi.ac.uk/EBISearchService}getEntryResponse"><s:elements><s:arraytype optional="false" unbounded="false" wrapped="true" typename="ArrayOfString" name="entryValues" qname="{http://www.ebi.ac.uk/EBISearchService}>getEntryResponse>entryValues"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:extensions>
java.lang.String
false
input
0
'text/xml'
1
entryValues
1
l('text/plain')
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokelistFieldsparameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.2net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://www.ebi.ac.uk/ebisearch/service.ebi?wsdl
listFields
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokelistFields_inputdomain0output00net.sf.taverna.t2.activitieswsdl-activity1.2net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="listFields" name="parameters" qname="{http://www.ebi.ac.uk/EBISearchService}listFields"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="domain" qname="{http://www.ebi.ac.uk/EBISearchService}>listFields>domain" /></s:elements></s:complextype></s:extensions>
false
domain
0
'text/plain'
0
output
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokelistFields_outputinput0arrayOfFieldNames11net.sf.taverna.t2.activitieswsdl-activity1.2net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="listFieldsResponse" name="parameters" qname="{http://www.ebi.ac.uk/EBISearchService}listFieldsResponse"><s:elements><s:arraytype optional="false" unbounded="false" wrapped="true" typename="ArrayOfString" name="arrayOfFieldNames" qname="{http://www.ebi.ac.uk/EBISearchService}>listFieldsResponse>arrayOfFieldNames"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:extensions>
java.lang.String
false
input
0
'text/xml'
1
arrayOfFieldNames
1
l('text/plain')
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_two_stringsstring10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.2net.sf.taverna.t2.activities.localworker.LocalworkerActivity
org.embl.ebi.escience.scuflworkers.java.StringConcat
workflow
java.lang.String
true
string1
0
'text/plain'
java.lang.String
true
string2
0
'text/plain'
0
output
0
UserNameHere
2011-03-30 16:39:34.159 BST
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.2net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetEntryparametersgetEntry_inputentrygetEntry_inputfieldsgetEntry_inputdomaingetEntry_outputinputlistFieldsparameterslistFields_inputdomainlistFields_outputinputConcatenate_two_stringsstring1Concatenate_two_stringsstring2getEntry_output_entryValues
28d4438b-5326-4ec1-9c46-1ee3b08cb23b
2011-03-28 19:08:29.809 BST
4cc17549-3f52-4a93-adb4-52746c2e31a3
2011-03-28 19:12:01.629 BST
4db4c4e5-4f28-448c-8ab8-ab579454d6ee
2011-03-28 18:27:54.841 BST
5d320077-d00d-48c4-ad88-009a51fd10a1
2011-03-28 18:25:30.628 BST
6d71ee52-0f98-499a-b48d-ea6586d334b9
2011-03-28 19:11:45.502 BST
0ff56878-b4d2-4b72-b768-ecfa14497393
2011-03-28 18:57:50.617 BST
3cc20f68-58e9-4f62-ac8b-4f78e3814906
2011-03-28 18:55:42.38 BST
a8e6c66a-2319-47dd-9b2b-cf4642a180be
2011-03-28 19:07:07.123 BST
6dc968df-61ce-43fe-b497-5701fa930ff4
2011-03-30 16:39:39.780 BST
fac4bed3-abac-4864-8df7-8c97c5d9faba
2011-03-28 18:22:17.369 BST