Use UniProt to retrieve InterPro data

Script

String [] lines = parsed_uniprot.split("\n");
List list = new ArrayList();


for (String line: lines)
{
	if (line.startsWith(identifier_name))
	{
		list.add(line.substring(identifier_name.length()+1,line.length()).trim());
	}
}

out1 = list;

Script

out1 = in1.toLowerCase();

Script

String seperatorString = "\n";
if (seperator != void) {
	seperatorString = seperator;
}
StringBuffer sb = new StringBuffer();
Iterator j = go_defs.iterator();
for (Iterator i = go_ids.iterator(); i.hasNext();) {
	String id = (String) i.next();
	String def = (String) j.next();
	sb.append(id + seperatorString + def);
	if (i.hasNext()) {
		sb.append(seperatorString);
	}
}
concatenated = sb.toString();

Script

String seperatorString = "\n";
if (seperator != void) {
	seperatorString = seperator;
}
StringBuffer sb = new StringBuffer();
for (Iterator i = stringlist.iterator(); i.hasNext();) {
	String item = (String) i.next();
	sb.append(item);
	if (i.hasNext()) {
		sb.append(seperatorString);
	}
}
concatenated = sb.toString();

Value