Syntetic population mapper

Created: 2010-06-23 13:12:41 Last updated: 2010-12-09 10:43:38

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Inputs (3)

Name	Description
fieldToAggregate	Field from csv file to aggregate
dataURL
regionName

Processors (23)

Name	Type	Description
runBHPSLinker	wsdl	Wsdl http://geo-s12.leeds.ac.uk:8080/NeissModel_WS/ModelService?wsdl Wsdl Operation runBHPSLinker
runBHPSLinker_input	xmlsplitter
year	stringconstant	Value 2001
runBHPSLinker_output	xmlsplitter
XPath_From_Text	localworker	Script import org.dom4j.Document; import org.dom4j.Node; import org.dom4j.io.SAXReader; SAXReader reader = new SAXReader(false); reader.setIncludeInternalDTDDeclarations(false); reader.setIncludeExternalDTDDeclarations(false); Document document = reader.read(new StringReader(xmltext)); List nodelist = document.selectNodes(xpath); // Process the elements in the nodelist ArrayList outputList = new ArrayList(); ArrayList outputXmlList = new ArrayList(); String val = null; String xmlVal = null; for (Iterator iter = nodelist.iterator(); iter.hasNext();) { Node element = (Node) iter.next(); xmlVal = element.asXML(); val = element.getStringValue(); if (val != null && !val.equals("")) { outputList.add(val); outputXmlList.add(xmlVal); } } List nodelist=outputList; List nodelistAsXML=outputXmlList;
xpath_to_extract_region_name	stringconstant	Value /neiss_xml/results_data/data_element/result_url
xpath_to_extract_csv_url	stringconstant	Value /neiss_xml/results_data/data_element/result_url
XPath_From_Text_2	localworker	Script import org.dom4j.Document; import org.dom4j.Node; import org.dom4j.io.SAXReader; SAXReader reader = new SAXReader(false); reader.setIncludeInternalDTDDeclarations(false); reader.setIncludeExternalDTDDeclarations(false); Document document = reader.read(new StringReader(xmltext)); List nodelist = document.selectNodes(xpath); // Process the elements in the nodelist ArrayList outputList = new ArrayList(); ArrayList outputXmlList = new ArrayList(); String val = null; String xmlVal = null; for (Iterator iter = nodelist.iterator(); iter.hasNext();) { Node element = (Node) iter.next(); xmlVal = element.asXML(); val = element.getStringValue(); if (val != null && !val.equals("")) { outputList.add(val); outputXmlList.add(xmlVal); } } List nodelist=outputList; List nodelistAsXML=outputXmlList;
Get_Web_Page_from_URL	localworker	Script URL inputURL = null; if (base != void) { inputURL = new URL(new URL(base), url); } else { inputURL = new URL(url); } URLConnection con = inputURL.openConnection(); InputStream in = con.getInputStream(); InputStreamReader isr = new InputStreamReader(in); Reader inReader = new BufferedReader(isr); StringBuffer buf = new StringBuffer(); int ch; while ((ch = inReader.read()) > -1) { buf.append((char)ch); } inReader.close(); contents = buf.toString(); //String NEWLINE = System.getProperty("line.separator"); // //URL inputURL = null; //if (base != void) { // inputURL = new URL(new URL(base), url); //} else { // inputURL = new URL(url); //} //StringBuffer result = new StringBuffer(); //BufferedReader reader = new BufferedReader(new InputStreamReader(inputURL.openStream())); //String line = null; //while ((line = reader.readLine()) != null) { // result.append(line); // result.append(NEWLINE); //} // //contents = result.toString();
Extract_First_Item_From_List	localworker	Script if (!stringList.isEmpty()){ firstItem = stringList.get(0); } else{ firstItem = null; }
Extract_First_Item_From_List_2	localworker	Script if (!stringList.isEmpty()){ firstItem = stringList.get(0); } else{ firstItem = null; }
runMapper	wsdl	Wsdl http://geo-s12.leeds.ac.uk:8080/NeissModel_WS/ModelService?wsdl Wsdl Operation runMapper
runMapper_input	xmlsplitter
runMapper_output	xmlsplitter
geometry_value	stringconstant	Value OA
areaKey_value	stringconstant	Value OA_Code
dataValues_value	stringconstant	Value Gender_1
XPath_From_Text_3	localworker	Script import org.dom4j.Document; import org.dom4j.Node; import org.dom4j.io.SAXReader; SAXReader reader = new SAXReader(false); reader.setIncludeInternalDTDDeclarations(false); reader.setIncludeExternalDTDDeclarations(false); Document document = reader.read(new StringReader(xmltext)); List nodelist = document.selectNodes(xpath); // Process the elements in the nodelist ArrayList outputList = new ArrayList(); ArrayList outputXmlList = new ArrayList(); String val = null; String xmlVal = null; for (Iterator iter = nodelist.iterator(); iter.hasNext();) { Node element = (Node) iter.next(); xmlVal = element.asXML(); val = element.getStringValue(); if (val != null && !val.equals("")) { outputList.add(val); outputXmlList.add(xmlVal); } } List nodelist=outputList; List nodelistAsXML=outputXmlList;
xpath_to_extract_map_url	stringconstant	Value /neiss_xml/results_data/data_element/result_url
Extract_First_Item_From_List_3	localworker	Script if (!stringList.isEmpty()){ firstItem = stringList.get(0); } else{ firstItem = null; }
runPRMWithDataSimple	wsdl	Wsdl http://geo-s12.leeds.ac.uk:8080/NeissModel_WS/ModelService?wsdl Wsdl Operation runPRMWithDataSimple
runPRMWithDataSimple_output	xmlsplitter
runPRMWithDataSimple_input	xmlsplitter

Beanshells (0)

Outputs (7)

Name	Description
output
csv_url
region_name
csv_file
mapper_xml
map_url
PRMOutput

Datalinks (32)

Source	Sink
runBHPSLinker_input:output	runBHPSLinker:parameters
fieldToAggregate	runBHPSLinker_input:fieldToAggregate
year:value	runBHPSLinker_input:year
Extract_First_Item_From_List:firstItem	runBHPSLinker_input:region
runBHPSLinker:parameters	runBHPSLinker_output:input
xpath_to_extract_region_name:value	XPath_From_Text:xpath
runPRMWithDataSimple_output:return	XPath_From_Text:xml-text
xpath_to_extract_csv_url:value	XPath_From_Text_2:xpath
runBHPSLinker_output:return	XPath_From_Text_2:xml-text
Extract_First_Item_From_List_2:firstItem	Get_Web_Page_from_URL:url
XPath_From_Text:nodelist	Extract_First_Item_From_List:stringList
XPath_From_Text_2:nodelist	Extract_First_Item_From_List_2:stringList
runMapper_input:output	runMapper:parameters
Extract_First_Item_From_List_2:firstItem	runMapper_input:csvURL
geometry_value:value	runMapper_input:geometry
areaKey_value:value	runMapper_input:areaKey
dataValues_value:value	runMapper_input:dataValues
runMapper:parameters	runMapper_output:input
xpath_to_extract_map_url:value	XPath_From_Text_3:xpath
runMapper_output:return	XPath_From_Text_3:xml-text
XPath_From_Text_3:nodelist	Extract_First_Item_From_List_3:stringList
runPRMWithDataSimple_input:output	runPRMWithDataSimple:parameters
runPRMWithDataSimple:parameters	runPRMWithDataSimple_output:input
dataURL	runPRMWithDataSimple_input:dataURL
regionName	runPRMWithDataSimple_input:regionName
runBHPSLinker_output:return	output
Extract_First_Item_From_List_2:firstItem	csv_url
Extract_First_Item_From_List:firstItem	region_name
Get_Web_Page_from_URL:contents	csv_file
runMapper_output:return	mapper_xml
Extract_First_Item_From_List_3:firstItem	map_url
runPRMWithDataSimple_output:return	PRMOutput

Coordinations (1)

Controller	Target
runPRMWithDataSimple	runBHPSLinker

Information Workflow Type

Taverna 2

Information Uploader

Alex Nenadic

Information License

All versions of this Workflow are licensed under:

Information Version 2 (of 3)

Information Credits (1)

(People/Groups)

Alex Nenadic

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None

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Information Shared with Groups (1)

NeISS

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Information Attributed By (0)

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Information Favourited By (1)

Chrisser

Information Statistics

1636 viewings

1199 downloads

[ see breakdown ]

Citations (0)

None

Version History

In chronological order:

PRM and MapTube Integration Workflow

Created by Alex Nenadic on Wednesday 23 June 2010 13:12:41 (UTC)

Last edited by Alex Nenadic on Wednesday 23 June 2010 13:14:44 (UTC)
[untitled]

Created by Nick Malleson on Tuesday 21 September 2010 13:53:23 (UTC)

Last edited by Nick Malleson on Tuesday 21 September 2010 13:55:31 (UTC)

Revision comment:

Slightly simplified by replacing runPRMWithData service with runPRMWithDataSimple
Syntetic population mapper

Created by Nick Malleson on Tuesday 21 September 2010 16:05:28 (UTC)

Last edited by Alex Nenadic on Thursday 09 December 2010 10:43:38 (UTC)

Revision comment:

Simplified the mapper service, fewer constants required.