SBML_model_optimisationsbml00
<?xml version="1.0" encoding="UTF-8"?>
<sbml xmlns="http://www.sbml.org/sbml/level2/version3" level="2" version="3">
<model id="Taverna1" name="Test model">
<listOfUnitDefinitions>
<unitDefinition id="U/mg" name="U/mg">
<listOfUnits>
<unit kind="katal" scale="-9" multiplier="16.6669998168945"/>
<unit kind="gram" exponent="-1" scale="-3"/>
</listOfUnits>
</unitDefinition>
<unitDefinition id="U/ml" name="U/ml">
<listOfUnits>
<unit kind="katal" scale="-9" multiplier="16.6669998168945"/>
<unit kind="litre" exponent="-1" scale="-3"/>
</listOfUnits>
</unitDefinition>
<unitDefinition id="mM" name="millimolar">
<listOfUnits>
<unit kind="litre" exponent="-1"/>
<unit kind="mole" scale="-3"/>
</listOfUnits>
</unitDefinition>
<unitDefinition id="micromolar" name="micromolar">
<listOfUnits>
<unit kind="litre" exponent="-1"/>
<unit kind="mole" scale="-6"/>
</listOfUnits>
</unitDefinition>
<unitDefinition id="per_second" name="per_second">
<listOfUnits>
<unit kind="second" exponent="-1"/>
</listOfUnits>
</unitDefinition>
</listOfUnitDefinitions>
<listOfCompartments>
<compartment metaid="meta_C_1" id="C_1" name="Cytoplasm" size="1" outside="C_10" sboTerm="SBO:0000290">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_C_1">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:obo.go:GO:0005737"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</compartment>
<compartment metaid="meta_C_10" id="C_10" name="Plasma membrane" size="1" outside="C_2" sboTerm="SBO:0000290">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_C_10">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:obo.go:GO:0005886"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</compartment>
<compartment metaid="meta_C_2" id="C_2" name="Extracellular" size="1" sboTerm="SBO:0000290">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_C_2">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:obo.go:GO:0005576"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</compartment>
</listOfCompartments>
<listOfSpecies>
<species metaid="meta_M_276" id="M_276" name="D-Fructose 1,6-bisphosphate" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_276_inchi">InChI=1/C6H14O12P2/c7-3(1-17-19(11,12)13)5(9)6(10)4(8)2-18-20(14,15)16/h3,5-7,9-10H,1-2H2,(H2,11,12,13)(H2,14,15,16)/t3-,5-,6-/m1/s1</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_276">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_276"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:16905"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_172" id="M_172" name="ATP" compartment="C_1" initialConcentration="3.5" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_172_inchi">InChI=1/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1/f/h18-19,21,23H,11H2</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_172">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_172"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:15422"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_273" id="M_273" name="D-Fructose 6-phosphate" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_273_inchi">InChI=1/C6H13O9P/c7-1-3(8)5(10)6(11)4(9)2-15-16(12,13)14/h4-7,9-11H,1-2H2,(H2,12,13,14)/t4-,5-,6-/m1/s1</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_273">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_273"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:15946"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_292" id="M_292" name="D-Glucose 6-phosphate" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_292_inchi">InChI=1/C6H13O9P/c7-1-3(8)5(10)6(11)4(9)2-15-16(12,13)14/h1,3-6,8-11H,2H2,(H2,12,13,14)/t3-,4+,5+,6+/m0/s1</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_292">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_292"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:15954"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_4" id="M_4" name="3-Phospho-D-glyceroyl phosphate" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_4_inchi">InChI=1/C3H8O10P2/c4-2(1-12-14(6,7)8)3(5)13-15(9,10)11/h2,4H,1H2,(H2,6,7,8)(H2,9,10,11)/t2-/m1/s1</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_4">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_4"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:16001"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_135" id="M_135" name="ADP" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_135_inchi">InChI=1/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1/f/h18-19,21H,11H2</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_135">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_135"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:16761"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_36" id="M_36" name="D-Glycerate 2-phosphate" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_36_inchi">InChI=1/C3H7O7P/c4-1-2(3(5)6)10-11(7,8)9/h2,4H,1H2,(H,5,6)(H2,7,8,9)/t2-/m1/s1</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_36">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_36"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:17835"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_289" id="M_289" name="Glyceraldehyde 3-phosphate" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_289_inchi">InChI=1/C3H7O6P/c4-1-3(5)2-9-10(6,7)8/h1,3,5H,2H2,(H2,6,7,8)</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_289">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_289"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:29052"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_411" id="M_411" name="Nicotinamide adenine dinucleotide" compartment="C_1" initialConcentration="4" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_411_inchi">InChI=1/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/p+1/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1/fC21H28N7O14P2/h34,36H,22-23H2/q+1</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_411">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_411"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:15846"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_454" id="M_454" name="Phosphate" compartment="C_1" initialConcentration="4" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_454_inchi">InChI=1/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-3/fO4P/q-3</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_454">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_454"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:18367"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_304" id="M_304" name="D-Glucose" compartment="C_1" initialConcentration="50" sboTerm="SBO:0000299">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_304">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:17634"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_57" id="M_57" name="3-Phospho-D-glycerate" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_57_inchi">InChI=1/C3H7O7P/c4-2(3(5)6)1-10-11(7,8)9/h2,4H,1H2,(H,5,6)(H2,7,8,9)/t2-/m1/s1</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_57">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_57"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:17794"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_329" id="M_329" name="H+" compartment="C_1" initialConcentration="4" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_329_inchi">InChI=1/p+1/fH/q+1</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_329">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_329"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:15378"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_446" id="M_446" name="Phosphoenolpyruvate" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_446_inchi">InChI=1/C3H5O6P/c1-2(3(4)5)9-10(6,7)8/h1H2,(H,4,5)(H2,6,7,8)/p-1</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_446">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_446"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:18021"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_483" id="M_483" name="Pyruvate" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_483_inchi">InChI=1/C3H4O3/c1-2(4)3(5)6/h1H3,(H,5,6)/p-1/fC3H3O3/q-1</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_483">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_483"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:15361"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_234" id="M_234" name="Dihydroxyacetone phosphate" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_234_inchi">InChI=1/C3H7O6P/c4-1-3(5)2-9-10(6,7)8/h4H,1-2H2,(H2,6,7,8)/f/h6-7H</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_234">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_234"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:16108"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_330" id="M_330" name="H2O" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_330_inchi">InChI=1/H2O/h1H2</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_330">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_330"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:15377"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_412" id="M_412" name="Nicotinamide adenine dinucleotide - reduced" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_412_inchi">InChI=1/C21H29N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1,3-4,7-8,10-11,13-16,20-21,29-32H,2,5-6H2,(H2,23,33)(H,34,35)(H,36,37)(H2,22,24,25)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1/f/h34,36H,22-23H2</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_412">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_412"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:16908"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_121" id="M_121" name="Acetaldehyde" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_121_inchi">InChI=1/C2H4O/c1-2-3/h2H,1H3</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_121">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_121"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:15343"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_M_203" id="M_203" name="CO2" compartment="C_1" initialConcentration="0" sboTerm="SBO:0000299">
<annotation>
<in:inchi xmlns:in="http://biomodels.net/inchi" metaid="meta_M_203_inchi">InChI=1/CO2/c2-1-3</in:inchi>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_M_203">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="#meta_M_203"/>
<rdf:li rdf:resource="urn:miriam:obo.chebi:CHEBI:16526"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_E_375" id="E_375" name="YKL060C" compartment="C_1" initialConcentration="0.189150466680615" sboTerm="SBO:0000014">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_E_375">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:sgd:S000001543"/>
<rdf:li rdf:resource="urn:miriam:uniprot:P14540"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_Cx_40" id="Cx_40" name="YGR240C:YMR205C" compartment="C_1" initialConcentration="0.00337856838202656" sboTerm="SBO:0000297">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_Cx_40">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:uniprot:P16861"/>
<rdf:li rdf:resource="urn:miriam:uniprot:P16862"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_E_417" id="E_417" name="YBR196C" compartment="C_1" initialConcentration="0.0110396686481593" sboTerm="SBO:0000014">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_E_417">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:sgd:S000000400"/>
<rdf:li rdf:resource="urn:miriam:uniprot:P12709"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_E_670" id="E_670" name="YCR012W" compartment="C_1" initialConcentration="0.055110250684886" sboTerm="SBO:0000014">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_E_670">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:sgd:S000000605"/>
<rdf:li rdf:resource="urn:miriam:uniprot:P00560"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_E_352" id="E_352" name="YGR254W" compartment="C_1" initialConcentration="0.0925997002145096" sboTerm="SBO:0000014">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_E_352">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:sgd:S000003486"/>
<rdf:li rdf:resource="urn:miriam:uniprot:P00924"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_E_426" id="E_426" name="YJL052W" compartment="C_1" initialConcentration="0.0345345244515535" sboTerm="SBO:0000014">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_E_426">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:sgd:S000003588"/>
<rdf:li rdf:resource="urn:miriam:uniprot:P00360"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_E_502" id="E_502" name="YFR053C" compartment="C_1" initialConcentration="0.00166468793544766" sboTerm="SBO:0000014">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_E_502">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:sgd:S000001949"/>
<rdf:li rdf:resource="urn:miriam:uniprot:P04806"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_E_336" id="E_336" name="YKL152C" compartment="C_1" initialConcentration="0.0632293930179762" sboTerm="SBO:0000014">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_E_336">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:sgd:S000001635"/>
<rdf:li rdf:resource="urn:miriam:uniprot:P00950"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_E_726" id="E_726" name="YAL038W" compartment="C_1" initialConcentration="0.297886720740557" sboTerm="SBO:0000014">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_E_726">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:sgd:S000000036"/>
<rdf:li rdf:resource="urn:miriam:uniprot:P00549"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
<species metaid="meta_E_24" id="E_24" name="YLR044C" compartment="C_1" initialConcentration="0.0952086884800322" sboTerm="SBO:0000014">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_E_24">
<bqbiol:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:sgd:S000004034"/>
<rdf:li rdf:resource="urn:miriam:uniprot:P06169"/>
</rdf:Bag>
</bqbiol:is>
</rdf:Description>
</rdf:RDF>
</annotation>
</species>
</listOfSpecies>
<listOfReactions>
<reaction metaid="meta_R_555" id="R_555" name="fructose-bisphosphate aldolase" sboTerm="SBO:0000176">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_R_555">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:8435847"/>
<rdf:li rdf:resource="urn:miriam:ec-code:4.1.2.13"/>
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF>
</annotation>
<listOfReactants>
<speciesReference species="M_276"/>
</listOfReactants>
<listOfProducts>
<speciesReference species="M_234"/>
<speciesReference species="M_289"/>
</listOfProducts>
<listOfModifiers>
<modifierSpeciesReference species="E_375"/>
</listOfModifiers>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<divide/>
<apply>
<times/>
<ci> kcat </ci>
<ci> Et </ci>
<ci> M_276 </ci>
</apply>
<apply>
<plus/>
<ci> Ks </ci>
<ci> M_276 </ci>
</apply>
</apply>
</math>
<listOfParameters>
<parameter id="kcat" value="4.1385594999"/>
<parameter id="Ks" value="0.45070069095"/>
<parameter id="Et" value="4.0625e-05"/>
</listOfParameters>
</kineticLaw>
</reaction>
<reaction metaid="meta_R_1016" id="R_1016" name="phosphofructokinase" sboTerm="SBO:0000176">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_R_1016">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:3007939"/>
<rdf:li rdf:resource="urn:miriam:ec-code:2.7.1.11"/>
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF>
</annotation>
<listOfReactants>
<speciesReference species="M_172"/>
<speciesReference species="M_273"/>
</listOfReactants>
<listOfProducts>
<speciesReference species="M_135"/>
<speciesReference species="M_276"/>
<speciesReference species="M_329"/>
</listOfProducts>
<listOfModifiers>
<modifierSpeciesReference species="Cx_40"/>
</listOfModifiers>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<times/>
<ci> k0 </ci>
<ci> M_172 </ci>
<ci> M_273 </ci>
</apply>
</math>
<listOfParameters>
<parameter id="k0" value="1"/>
</listOfParameters>
</kineticLaw>
</reaction>
<reaction metaid="meta_R_1022" id="R_1022" name="glucose-6-phosphate isomerase" sboTerm="SBO:0000176">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_R_1022">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:8435847"/>
<rdf:li rdf:resource="urn:miriam:ec-code:5.3.1.9"/>
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF>
</annotation>
<listOfReactants>
<speciesReference species="M_292"/>
</listOfReactants>
<listOfProducts>
<speciesReference species="M_273"/>
</listOfProducts>
<listOfModifiers>
<modifierSpeciesReference species="E_417"/>
</listOfModifiers>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<divide/>
<apply>
<times/>
<ci> Vmax </ci>
<ci> M_292 </ci>
</apply>
<apply>
<plus/>
<apply>
<times/>
<ci> Km </ci>
<apply>
<plus/>
<cn type="integer"> 1 </cn>
<apply>
<divide/>
<ci> I </ci>
<ci> Ki </ci>
</apply>
</apply>
</apply>
<ci> M_292 </ci>
</apply>
</apply>
</math>
<listOfParameters>
<parameter id="Ki" value="1.9"/>
<parameter id="I" value="0"/>
<parameter id="Vmax" value="0"/>
<parameter id="Km" value="0.86"/>
<parameter id="E" value="0.1"/>
</listOfParameters>
</kineticLaw>
</reaction>
<reaction metaid="meta_R_1023" id="R_1023" name="phosphoglycerate kinase" sboTerm="SBO:0000176">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_R_1023">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:6347186"/>
<rdf:li rdf:resource="urn:miriam:ec-code:2.7.2.3"/>
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF>
</annotation>
<listOfReactants>
<speciesReference species="M_4"/>
<speciesReference species="M_135"/>
</listOfReactants>
<listOfProducts>
<speciesReference species="M_57"/>
<speciesReference species="M_172"/>
</listOfProducts>
<listOfModifiers>
<modifierSpeciesReference species="E_670"/>
</listOfModifiers>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<divide/>
<apply>
<times/>
<ci> E_670 </ci>
<ci> kcat </ci>
<ci> M_57 </ci>
</apply>
<apply>
<plus/>
<ci> Km </ci>
<ci> M_57 </ci>
</apply>
</apply>
</math>
<listOfParameters>
<parameter id="kcat" value="343.5"/>
<parameter id="Km" value="0.77"/>
</listOfParameters>
</kineticLaw>
</reaction>
<reaction metaid="meta_R_1445" id="R_1445" name="enolase" sboTerm="SBO:0000176">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_R_1445">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:7520111"/>
<rdf:li rdf:resource="urn:miriam:ec-code:4.2.1.11"/>
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF>
</annotation>
<listOfReactants>
<speciesReference species="M_36"/>
</listOfReactants>
<listOfProducts>
<speciesReference species="M_330"/>
<speciesReference species="M_446"/>
</listOfProducts>
<listOfModifiers>
<modifierSpeciesReference species="E_352"/>
</listOfModifiers>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<divide/>
<apply>
<times/>
<ci> Vmax </ci>
<ci> M_36 </ci>
</apply>
<apply>
<plus/>
<ci> Km </ci>
<ci> M_36 </ci>
</apply>
</apply>
</math>
<listOfParameters>
<parameter id="Km" value="48"/>
<parameter id="Vmax" value="42"/>
<parameter id="B" value="1"/>
</listOfParameters>
</kineticLaw>
</reaction>
<reaction metaid="meta_R_1501" id="R_1501" name="glyceraldehyde-3-phosphate dehydrogenase" sboTerm="SBO:0000176">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_R_1501">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:3905788"/>
<rdf:li rdf:resource="urn:miriam:ec-code:1.2.1.12"/>
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF>
</annotation>
<listOfReactants>
<speciesReference species="M_289"/>
<speciesReference species="M_411"/>
<speciesReference species="M_454"/>
</listOfReactants>
<listOfProducts>
<speciesReference species="M_4"/>
<speciesReference species="M_329"/>
<speciesReference species="M_412"/>
</listOfProducts>
<listOfModifiers>
<modifierSpeciesReference species="E_426"/>
</listOfModifiers>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<times/>
<ci> k1 </ci>
<ci> M_289 </ci>
<ci> M_411 </ci>
<ci> M_454 </ci>
</apply>
</math>
<listOfParameters>
<parameter id="k1" value="1"/>
</listOfParameters>
</kineticLaw>
</reaction>
<reaction metaid="meta_R_1549" id="R_1549" name="hexokinase (D-glucose:ATP)" sboTerm="SBO:0000176">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_R_1549">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:6394965"/>
<rdf:li rdf:resource="urn:miriam:ec-code:2.7.1.1"/>
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF>
</annotation>
<listOfReactants>
<speciesReference species="M_172"/>
<speciesReference species="M_304"/>
</listOfReactants>
<listOfProducts>
<speciesReference species="M_135"/>
<speciesReference species="M_292"/>
<speciesReference species="M_329"/>
</listOfProducts>
<listOfModifiers>
<modifierSpeciesReference species="E_502"/>
</listOfModifiers>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<times/>
<ci> k2 </ci>
<ci> M_172 </ci>
<ci> M_304 </ci>
</apply>
</math>
<listOfParameters>
<parameter id="k2" value="1"/>
</listOfParameters>
</kineticLaw>
</reaction>
<reaction metaid="meta_R_1655" id="R_1655" name="phosphoglycerate mutase" sboTerm="SBO:0000176">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_R_1655">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:3033435"/>
<rdf:li rdf:resource="urn:miriam:ec-code:5.4.2.1"/>
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF>
</annotation>
<listOfReactants>
<speciesReference species="M_57"/>
</listOfReactants>
<listOfProducts>
<speciesReference species="M_36"/>
</listOfProducts>
<listOfModifiers>
<modifierSpeciesReference species="E_336"/>
</listOfModifiers>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<times/>
<ci> k3 </ci>
<ci> M_57 </ci>
</apply>
</math>
<listOfParameters>
<parameter id="k3" value="1"/>
</listOfParameters>
</kineticLaw>
</reaction>
<reaction metaid="meta_R_1680" id="R_1680" name="pyruvate kinase" sboTerm="SBO:0000176">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_R_1680">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:6185493"/>
<rdf:li rdf:resource="urn:miriam:ec-code:2.7.1.40"/>
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF>
</annotation>
<listOfReactants>
<speciesReference species="M_135"/>
<speciesReference species="M_329"/>
<speciesReference species="M_446"/>
</listOfReactants>
<listOfProducts>
<speciesReference species="M_172"/>
<speciesReference species="M_483"/>
</listOfProducts>
<listOfModifiers>
<modifierSpeciesReference species="E_726"/>
</listOfModifiers>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<times/>
<ci> k4 </ci>
<ci> M_135 </ci>
<ci> M_329 </ci>
<ci> M_446 </ci>
</apply>
</math>
<listOfParameters>
<parameter id="k4" value="1"/>
</listOfParameters>
</kineticLaw>
</reaction>
<reaction metaid="meta_R_1681" id="R_1681" name="pyruvate decarboxylase" sboTerm="SBO:0000176">
<annotation>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
<rdf:Description rdf:about="#meta_R_1681">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:ec-code:4.1.1.1"/>
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF>
</annotation>
<listOfReactants>
<speciesReference species="M_329"/>
<speciesReference species="M_483"/>
</listOfReactants>
<listOfProducts>
<speciesReference species="M_121"/>
<speciesReference species="M_203"/>
</listOfProducts>
<listOfModifiers>
<modifierSpeciesReference species="E_24"/>
</listOfModifiers>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<times/>
<ci> k5 </ci>
<ci> M_329 </ci>
<ci> M_483 </ci>
</apply>
</math>
<listOfParameters>
<parameter id="k5" value="1"/>
</listOfParameters>
</kineticLaw>
</reaction>
</listOfReactions>
</model>
</sbml>
2010-03-25 16:09:38.819 GMT
A parameterised SBML model
2010-03-25 16:09:47.900 GMT
optimised_sbml
An SBML model optimised against data from the MCISB key results database.
2010-03-26 13:05:01.187 GMT
createSysbioDataSourcesbml0net.sf.taverna.t2.activitiesbeanshell-activity1.0net.sf.taverna.t2.activities.beanshell.BeanshellActivity
system
sqlitejdbc-v053.jar
libsbmlj.jar
java.lang.String
true
sbml
0
text/plain
0
databaseURL
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeuserIdvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.0net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
dada
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecreateSimulationResourceuserId0resourceId00net.sf.taverna.t2.activitiesdataflow-activity1.0.1net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesendModelresourceId0userId0sbml0net.sf.taverna.t2.activitiesdataflow-activity1.0.1net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesendExptalDataSbrmluserId0resourceId0sbrml0net.sf.taverna.t2.activitiesdataflow-activity1.0.1net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokequeryKRDBnew_sbrml00net.sf.taverna.t2.activitiesdataflow-activity1.0.1net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecheckDatasbrml0sbml0newSbrml00net.sf.taverna.t2.activitiesbeanshell-activity1.0net.sf.taverna.t2.activities.beanshell.BeanshellActivity
system
libsbmlj.jar
libsbml_helpers.jar
java.lang.String
true
sbml
0
text/plain
java.lang.String
true
sbrml
0
text/plain
0
out
0
0
newSbrml
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeparameterEditorresourceId0userId0setFitItemsAndMethodXML00net.sf.taverna.t2.activitiesbeanshell-activity1.0net.sf.taverna.t2.activities.beanshell.BeanshellActivity
system
libsbmlj.jar
sqlitejdbc-v053.jar
java.lang.String
true
userId
0
text/plain
java.lang.String
true
resourceId
0
text/plain
0
setFitItemsAndMethodXML
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesetFitItemsAndMethodfitItemsAndMethodXML0net.sf.taverna.t2.activitiesdataflow-activity1.0.1net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokestartSimulatoruserId0resourceId0net.sf.taverna.t2.activitiesdataflow-activity1.0.1net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokepollStatususerId0resourceId0net.sf.taverna.t2.activitiesdataflow-activity1.0.1net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.0</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<script>loop = "" + ! status.matches("COMPLETED");
if ("true".matches(loop)) {
Thread.sleep(30000);
}</script>
<dependencies />
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
<name>status</name>
<depth>0</depth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<granularDepth>0</granularDepth>
<name>loop</name>
<depth>0</depth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResultsuserId0resourceId0result00net.sf.taverna.t2.activitiesdataflow-activity1.0.1net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokereleaseResourcesuserId0resourceId0net.sf.taverna.t2.activitiesdataflow-activity1.0.1net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecreateSysbioDataSourcesbmlcreateSimulationResourceuserIdsendModelresourceIdsendModeluserIdsendModelsbmlsendExptalDataSbrmluserIdsendExptalDataSbrmlresourceIdsendExptalDataSbrmlsbrmlcheckDatasbrmlcheckDatasbmlparameterEditorresourceIdparameterEditoruserIdsetFitItemsAndMethodfitItemsAndMethodXMLstartSimulatoruserIdstartSimulatorresourceIdpollStatususerIdpollStatusresourceIdgetResultsuserIdgetResultsresourceIdreleaseResourcesuserIdreleaseResourcesresourceIdoptimised_sbml
Peter Li
2010-03-26 13:05:24.552 GMT
SBML model optimisation
2010-03-26 13:05:46.342 GMT
This workflow modifies reaction kinetic parameters against experimental data stored in the MCISB key results database
2010-03-26 13:06:52.731 GMT
Workflow1new_sbrmlexptTitlevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.0net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
Glycolysis Metabolomics Results
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeexptDatevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.0net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
2009-09-16
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecreateCountUrldate0title0url00net.sf.taverna.t2.activitiesbeanshell-activity1.0net.sf.taverna.t2.activities.beanshell.BeanshellActivity
workflow
java.lang.String
true
date
0
text/plain
java.lang.String
true
title
0
text/plain
0
url
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetCounturl0contents00net.sf.taverna.t2.activitieslocalworker-activity1.0net.sf.taverna.t2.activities.localworker.LocalworkerActivity
org.embl.ebi.escience.scuflworkers.java.WebPageFetcher
workflow
java.lang.String
true
url
0
'text/x-taverna-web-url'
java.lang.String
true
base
0
'text/x-taverna-web-url'
0
contents
0
'text/plain,text/html'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecleanCountDatainStr0outStr00net.sf.taverna.t2.activitiesbeanshell-activity1.0net.sf.taverna.t2.activities.beanshell.BeanshellActivity
workflow
java.lang.String
true
inStr
0
text/plain
0
outStr
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecreateQueryUrldate0title0count0url00net.sf.taverna.t2.activitiesbeanshell-activity1.0net.sf.taverna.t2.activities.beanshell.BeanshellActivity
workflow
java.lang.String
true
count
0
text/plain
java.lang.String
true
date
0
text/plain
java.lang.String
true
title
0
text/plain
0
url
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetDataurl0contents00net.sf.taverna.t2.activitieslocalworker-activity1.0net.sf.taverna.t2.activities.localworker.LocalworkerActivity
org.embl.ebi.escience.scuflworkers.java.WebPageFetcher
workflow
java.lang.String
true
url
0
'text/x-taverna-web-url'
java.lang.String
true
base
0
'text/x-taverna-web-url'
0
contents
0
'text/plain,text/html'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecleanDatainStr0outStr00net.sf.taverna.t2.activitiesbeanshell-activity1.0net.sf.taverna.t2.activities.beanshell.BeanshellActivity
workflow
java.lang.String
true
inStr
0
text/plain
0
outStr
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeconvert2SBRMLdata0convertReturn00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://dbk-ed.mib.man.ac.uk:8080/KeyResults2SBRML/services/KeyResults2SBRML?wsdl
convert
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeextractChebiIdssbrml0chebiIds11net.sf.taverna.t2.activitiesbeanshell-activity1.0net.sf.taverna.t2.activities.beanshell.BeanshellActivity
workflow
java.lang.String
true
sbrml
0
text/plain
1
chebiIds
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetSpeciesIdByURIuri0getSpeciesIdByURIReturn11net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://dbk-ed.mib.man.ac.uk:8080/YeastMetabolicNetwork/services/YeastMetabolicNetwork?wsdl
getSpeciesIdByURI
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeflatteninputlist2outputlist11net.sf.taverna.t2.activitieslocalworker-activity1.0net.sf.taverna.t2.activities.localworker.LocalworkerActivity
org.embl.ebi.escience.scuflworkers.java.FlattenList
workflow
[B
true
inputlist
2
l(l(''))
1
outputlist
1
l('')
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokemergespeciesIds1chebiIds1sbrml0sbrml_out00net.sf.taverna.t2.activitiesbeanshell-activity1.0net.sf.taverna.t2.activities.beanshell.BeanshellActivity
workflow
java.lang.String
true
speciesIds
1
text/plain
java.lang.String
true
chebiIds
1
text/plain
java.lang.String
true
sbrml
0
text/plain
0
sbrml_out
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecreateCountUrldatecreateCountUrltitlegetCounturlcleanCountDatainStrcreateQueryUrldatecreateQueryUrltitlecreateQueryUrlcountgetDataurlcleanDatainStrconvert2SBRMLdataextractChebiIdssbrmlgetSpeciesIdByURIuriflatteninputlistmergespeciesIdsmergechebiIdsmergesbrmlnew_sbrmlWorkflow8sbrml00userId00resourceId00statussendExperimentalDataInSBRMLParameters0Parameters00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://www.comp-sys-bio.org/CopasiWS/services/ParameterEstimationService?wsdl
sendExperimentalDataInSBRML
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesendExperimentalDataInSBRML_ParametersuserId0sbrml0resourceId0output00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="SendExperimentalDataInSBRML" name="Parameters" qname="{http://parameterestimationws.services.copasiws.copasi.org/types}SendExperimentalDataInSBRML"><s:elements><s:basetype optional="false" unbounded="false" typename="int" name="resourceId" qname=">SendExperimentalDataInSBRML>resourceId" /><s:basetype optional="false" unbounded="false" typename="string" name="userId" qname=">SendExperimentalDataInSBRML>userId" /><s:basetype optional="false" unbounded="false" typename="string" name="sbrml" qname=">SendExperimentalDataInSBRML>sbrml" /></s:elements></s:complextype></s:extensions>
false
resourceId
0
'text/plain'
false
userId
0
'text/plain'
false
sbrml
0
'text/plain'
0
output
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesendExperimentalDataInSBRML_Parameters_2input0status00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="SendExperimentalDataInSBRMLResponse" name="Parameters" qname="{http://parameterestimationws.services.copasiws.copasi.org/types}SendExperimentalDataInSBRMLResponse"><s:elements><s:complextype optional="false" unbounded="false" typename="Status" name="status" qname=">SendExperimentalDataInSBRMLResponse>status"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="code" qname="{http://copasi.org/copasiws/schemas}Status>code" /><s:basetype optional="true" unbounded="false" typename="string" name="message" qname="{http://copasi.org/copasiws/schemas}Status>message" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
java.lang.String
false
input
0
'text/xml'
0
status
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesendExperimentalDataInSBRMLParameterssendExperimentalDataInSBRML_ParametersuserIdsendExperimentalDataInSBRML_ParameterssbrmlsendExperimentalDataInSBRML_ParametersresourceIdsendExperimentalDataInSBRML_Parameters_2inputstatusWorkflow7sbml00resourceId00userId00statussendModelParameters0Parameters00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://www.comp-sys-bio.org/CopasiWS/services/ParameterEstimationService?wsdl
sendModel
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesendModel_ParametersuserId0sbml0resourceId0output00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="SendModel" name="Parameters" qname="{http://parameterestimationws.services.copasiws.copasi.org/types}SendModel"><s:elements><s:basetype optional="false" unbounded="false" typename="int" name="resourceId" qname=">SendModel>resourceId" /><s:basetype optional="false" unbounded="false" typename="string" name="userId" qname=">SendModel>userId" /><s:basetype optional="true" unbounded="false" typename="string" name="copasiml" qname=">SendModel>copasiml" /><s:basetype optional="true" unbounded="false" typename="string" name="sbml" qname=">SendModel>sbml" /></s:elements></s:complextype></s:extensions>
false
resourceId
0
'text/plain'
false
userId
0
'text/plain'
false
copasiml
0
'text/plain'
false
sbml
0
'text/plain'
0
output
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesendModel_Parameters_2input0status00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="SendModelResponse" name="Parameters" qname="{http://parameterestimationws.services.copasiws.copasi.org/types}SendModelResponse"><s:elements><s:complextype optional="false" unbounded="false" typename="Status" name="status" qname=">SendModelResponse>status"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="code" qname="{http://copasi.org/copasiws/schemas}Status>code" /><s:basetype optional="true" unbounded="false" typename="string" name="message" qname="{http://copasi.org/copasiws/schemas}Status>message" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
java.lang.String
false
input
0
'text/xml'
0
status
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesendModelParameterssendModel_ParametersuserIdsendModel_ParameterssbmlsendModel_ParametersresourceIdsendModel_Parameters_2inputstatusWorkflow10userId00statusresourceIdcreateSimulationResourceParameters0Parameters00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://www.comp-sys-bio.org/CopasiWS/services/ParameterEstimationService?wsdl
createSimulationResource
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecreateSimulationResource_Parametersuser0output00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="CreateSimulationResource" name="Parameters" qname="{http://parameterestimationws.services.copasiws.copasi.org/types}CreateSimulationResource"><s:elements><s:complextype optional="false" unbounded="false" typename="User" name="user" qname=">CreateSimulationResource>user"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="userId" qname="{http://copasi.org/copasiws/schemas}User>userId" /><s:basetype optional="true" unbounded="false" typename="string" name="password" qname="{http://copasi.org/copasiws/schemas}User>password" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
false
user
0
'text/xml'
0
output
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeParameters_useruserId0output00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="User" name="user" qname=">CreateSimulationResource>user"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="userId" qname="{http://copasi.org/copasiws/schemas}User>userId" /><s:basetype optional="true" unbounded="false" typename="string" name="password" qname="{http://copasi.org/copasiws/schemas}User>password" /></s:elements></s:complextype></s:extensions>
false
userId
0
'text/plain'
false
password
0
'text/plain'
0
output
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecreateSimulationResource_Parameters_2input0status00resourceId00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="CreateSimulationResourceResponse" name="Parameters" qname="{http://parameterestimationws.services.copasiws.copasi.org/types}CreateSimulationResourceResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="int" name="resourceId" qname=">CreateSimulationResourceResponse>resourceId" /><s:complextype optional="false" unbounded="false" typename="Status" name="status" qname=">CreateSimulationResourceResponse>status"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="code" qname="{http://copasi.org/copasiws/schemas}Status>code" /><s:basetype optional="true" unbounded="false" typename="string" name="message" qname="{http://copasi.org/copasiws/schemas}Status>message" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
java.lang.String
false
input
0
'text/xml'
0
resourceId
0
'text/plain'
0
status
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecreateSimulationResourceParameterscreateSimulationResource_ParametersuserParameters_useruserIdcreateSimulationResource_Parameters_2inputstatusresourceIdWorkflow9fitItemsAndMethodXML00statussetFitItemsAndMethodParameters0Parameters00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://www.comp-sys-bio.org/CopasiWS/services/ParameterEstimationService?wsdl
setFitItemsAndMethod
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesetFitItemsAndMethod_Parametersinput0status00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="SetFitItemsAndMethodResponse" name="Parameters" qname="{http://parameterestimationws.services.copasiws.copasi.org/types}SetFitItemsAndMethodResponse"><s:elements><s:complextype optional="false" unbounded="false" typename="Status" name="status" qname=">SetFitItemsAndMethodResponse>status"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="code" qname="{http://copasi.org/copasiws/schemas}Status>code" /><s:basetype optional="true" unbounded="false" typename="string" name="message" qname="{http://copasi.org/copasiws/schemas}Status>message" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
java.lang.String
false
input
0
'text/xml'
0
status
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesetFitItemsAndMethodParameterssetFitItemsAndMethod_ParametersinputstatusWorkflow16userId00resourceId00statusgetSimulatorStatusParameters0Parameters00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://www.comp-sys-bio.org/CopasiWS/services/ParameterEstimationService?wsdl
getSimulatorStatus
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetSimulatorStatus_ParametersresourceId0userId0output00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="GetSimulatorStatus" name="Parameters" qname="{http://copasi.org/copasiws/schemas}GetSimulatorStatus"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="userId" qname="{http://copasi.org/copasiws/schemas}>GetSimulatorStatus>userId" /><s:basetype optional="false" unbounded="false" typename="int" name="resourceId" qname="{http://copasi.org/copasiws/schemas}>GetSimulatorStatus>resourceId" /></s:elements></s:complextype></s:extensions>
false
userId
0
'text/plain'
false
resourceId
0
'text/plain'
0
output
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetSimulatorStatus_Parameters_2input0status00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="GetSimulatorStatusResponse" name="Parameters" qname="{http://copasi.org/copasiws/schemas}GetSimulatorStatusResponse"><s:elements><s:complextype optional="false" unbounded="false" typename="Status" name="status" qname="{http://copasi.org/copasiws/schemas}>GetSimulatorStatusResponse>status"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="code" qname="{http://copasi.org/copasiws/schemas}Status>code" /><s:basetype optional="true" unbounded="false" typename="string" name="message" qname="{http://copasi.org/copasiws/schemas}Status>message" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
java.lang.String
false
input
0
'text/xml'
0
status
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke2_statusinput0code00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="Status" name="status" qname="{http://copasi.org/copasiws/schemas}>GetSimulatorStatusResponse>status"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="code" qname="{http://copasi.org/copasiws/schemas}Status>code" /><s:basetype optional="true" unbounded="false" typename="string" name="message" qname="{http://copasi.org/copasiws/schemas}Status>message" /></s:elements></s:complextype></s:extensions>
java.lang.String
false
input
0
'text/xml'
0
code
0
'text/plain'
0
message
0
'text/plain'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetSimulatorStatusParametersgetSimulatorStatus_ParametersresourceIdgetSimulatorStatus_ParametersuserIdgetSimulatorStatus_Parameters_2input2_statusinputstatusWorkflow10userId00resourceId00messagecodedeleteSimulationResourceParameters0Parameters00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://www.comp-sys-bio.org/CopasiWS/services/ParameterEstimationService?wsdl
deleteSimulationResource
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokedeleteSimulationResource_ParametersuserId0resourceId0output00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="DeleteSimulationResource" name="Parameters" qname="{http://copasi.org/copasiws/schemas}DeleteSimulationResource"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="userId" qname="{http://copasi.org/copasiws/schemas}>DeleteSimulationResource>userId" /><s:basetype optional="false" unbounded="false" typename="int" name="resourceId" qname="{http://copasi.org/copasiws/schemas}>DeleteSimulationResource>resourceId" /></s:elements></s:complextype></s:extensions>
false
userId
0
'text/plain'
false
resourceId
0
'text/plain'
0
output
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokedeleteSimulationResource_Parameters_2input0status00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="DeleteSimulationResourceResponse" name="Parameters" qname="{http://copasi.org/copasiws/schemas}DeleteSimulationResourceResponse"><s:elements><s:complextype optional="false" unbounded="false" typename="Status" name="status" qname="{http://copasi.org/copasiws/schemas}>DeleteSimulationResourceResponse>status"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="code" qname="{http://copasi.org/copasiws/schemas}Status>code" /><s:basetype optional="true" unbounded="false" typename="string" name="message" qname="{http://copasi.org/copasiws/schemas}Status>message" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
java.lang.String
false
input
0
'text/xml'
0
status
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke2_statusinput0message00code00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="Status" name="status" qname="{http://copasi.org/copasiws/schemas}>DeleteSimulationResourceResponse>status"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="code" qname="{http://copasi.org/copasiws/schemas}Status>code" /><s:basetype optional="true" unbounded="false" typename="string" name="message" qname="{http://copasi.org/copasiws/schemas}Status>message" /></s:elements></s:complextype></s:extensions>
java.lang.String
false
input
0
'text/xml'
0
code
0
'text/plain'
0
message
0
'text/plain'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokedeleteSimulationResourceParametersdeleteSimulationResource_ParametersuserIddeleteSimulationResource_ParametersresourceIddeleteSimulationResource_Parameters_2input2_statusinputmessagecodeWorkflow11resourceId00userId00resultgetResultParameters0Parameters00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://www.comp-sys-bio.org/CopasiWS/services/ParameterEstimationService?wsdl
getResult
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResult_ParametersuserId0resourceId0output00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="GetResult" name="Parameters" qname="{http://parameterestimationws.services.copasiws.copasi.org/types}GetResult"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="userId" qname=">GetResult>userId" /><s:basetype optional="false" unbounded="false" typename="int" name="resourceId" qname=">GetResult>resourceId" /></s:elements></s:complextype></s:extensions>
false
userId
0
'text/plain'
false
resourceId
0
'text/plain'
0
output
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResult_Parameters_2input0outputResult00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="GetResultResponse" name="Parameters" qname="{http://parameterestimationws.services.copasiws.copasi.org/types}GetResultResponse"><s:elements><s:complextype optional="false" unbounded="false" typename="OutputResult" name="outputResult" qname=">GetResultResponse>outputResult"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="result" qname="{http://copasi.org/copasiws/schemas}OutputResult>result" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
java.lang.String
false
input
0
'text/xml'
0
outputResult
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke2_outputResultinput0result00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="OutputResult" name="outputResult" qname=">GetResultResponse>outputResult"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="result" qname="{http://copasi.org/copasiws/schemas}OutputResult>result" /></s:elements></s:complextype></s:extensions>
java.lang.String
false
input
0
'text/xml'
0
result
0
'text/plain'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetResultParametersgetResult_ParametersuserIdgetResult_ParametersresourceIdgetResult_Parameters_2input2_outputResultinputresultWorkflow12resourceId00userId00statusstartSimulatorParameters0Parameters00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://www.comp-sys-bio.org/CopasiWS/services/ParameterEstimationService?wsdl
startSimulator
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokestartSimulator_ParametersuserId0resourceId0output00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="StartSimulator" name="Parameters" qname="{http://parameterestimationws.services.copasiws.copasi.org/types}StartSimulator"><s:elements><s:basetype optional="false" unbounded="false" typename="int" name="resourceId" qname=">StartSimulator>resourceId" /><s:basetype optional="false" unbounded="false" typename="string" name="userId" qname=">StartSimulator>userId" /></s:elements></s:complextype></s:extensions>
false
resourceId
0
'text/plain'
false
userId
0
'text/plain'
0
output
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokestartSimulator_Parameters_2input0status00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="StartSimulatorResponse" name="Parameters" qname="{http://parameterestimationws.services.copasiws.copasi.org/types}StartSimulatorResponse"><s:elements><s:complextype optional="false" unbounded="false" typename="Status" name="status" qname=">StartSimulatorResponse>status"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="code" qname="{http://copasi.org/copasiws/schemas}Status>code" /><s:basetype optional="true" unbounded="false" typename="string" name="message" qname="{http://copasi.org/copasiws/schemas}Status>message" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
java.lang.String
false
input
0
'text/xml'
0
status
0
'text/xml'
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokestartSimulatorParametersstartSimulator_ParametersuserIdstartSimulator_ParametersresourceIdstartSimulator_Parameters_2inputstatus