Kegg_pathway_diagramsgene_ids1139452010-03-13 08:12:45.624 GMTA list of KEGG gene ids2010-03-13 08:12:41.71 GMTSpecies00The three letter species code used by KEGG2010-03-13 08:05:59.216 GMTThe three letter species code2010-03-13 08:05:45.460 GMTKEGG 2010-03-13 08:05:23.807 GMTeco2010-03-13 08:06:06.679 GMTattachmentlistKeggPathwayIDspath:hsa000102010-03-13 08:15:43.143 GMTA list of the pathways found.2010-03-13 08:15:37.559 GMTattachmentlist2KeggImageA list of pathway images in png format. If no pathway is found in which all the specified genes are involved, the list will be empty.2010-03-13 08:13:52.343 GMTkeggimageurlThe URLs of the images produced for the KeggImage output2010-03-13 08:14:19.106 GMTThe URLs of the images produced for the KeggImage output.2010-03-13 08:14:48.935 GMThttp://soap.genome.jp/tmp/mark_pathway_www_api.126846700018802/hsa00010.png2010-03-13 08:14:44.67 GMTkeggGeneNameshsa:52362010-03-13 08:17:09.171 GMTA list of the gene ids, that was given as input with the species code concatenated.2010-03-13 08:17:01.144 GMTget_pathways_by_genesgenes_id_list1attachmentList11return11net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.WSDLActivityhttp://soap.genome.jp/KEGG.wsdlget_pathways_by_genesnet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokemark_pathway_by_objectsobject_id_list1pathway_id0attachmentList11return00net.sf.taverna.t2.activitieswsdl-activity1.0.1net.sf.taverna.t2.activities.wsdl.WSDLActivityhttp://soap.genome.jp/KEGG.wsdlmark_pathway_by_objectsnet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGet_Image_From_URLurl0image00net.sf.taverna.t2.activitieslocalworker-activity1.0net.sf.taverna.t2.activities.localworker.LocalworkerActivityorg.embl.ebi.escience.scuflworkers.java.WebImageFetcherworkflowjava.lang.Stringtrueurl0'text/x-taverna-web-url'java.lang.Stringtruebase0'text/x-taverna-web-url'0image0'image/*'net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeWorkflow89part10part20string00net.sf.taverna.t2.activitiesdataflow-activity1.0.1net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeget_pathways_by_genesgenes_id_listmark_pathway_by_objectsobject_id_listmark_pathway_by_objectspathway_idGet_Image_From_URLurlWorkflow89part1Workflow89part2attachmentlistKeggPathwayIDsattachmentlist2KeggImagekeggimageurlkeggGeneNamesFind pathways in which all the genes in the list are involved. For each pathway draw the pathway diagram.2010-03-13 07:59:28.240 GMTJannetta Steyn2010-03-12 18:39:29.404 GMTKegg pathway diagrams2010-03-12 18:40:11.636 GMTfor each protein draw a diagram of the Kegg pathway that its protein is involved in and where available visualise the structures2010-03-12 18:39:23.38 GMTWorkflow89part100part200stringConcatenate_two_stringsstring10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.0net.sf.taverna.t2.activities.localworker.LocalworkerActivityorg.embl.ebi.escience.scuflworkers.java.StringConcatworkflowjava.lang.Stringtruestring10'text/plain'java.lang.Stringtruestring20'text/plain'0output0'text/plain'net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_two_strings_2string10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.0net.sf.taverna.t2.activities.localworker.LocalworkerActivityorg.embl.ebi.escience.scuflworkers.java.StringConcatworkflowjava.lang.Stringtruestring10'text/plain'java.lang.Stringtruestring20'text/plain'0output0'text/plain'net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokestring2_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.0net.sf.taverna.t2.activities.stringconstant.StringConstantActivity:net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_two_stringsstring1Concatenate_two_stringsstring2Concatenate_two_strings_2string1Concatenate_two_strings_2string2string