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James Eales

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Core text mining workflows

Created: 2010-02-19 10:12:33 | Last updated: 2011-12-13 16:03:17

This pack contains workflows we have created to support core text mining tasks. We currently provide workflows to do these tasks Loading documents (text or PDF) PDF to text conversion Sentence splitting Text cleaning (ASCII or XML-valid) Term recognition (using NaCTeM service TerMine)

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James Eales

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Creating a focused corpus of factual outcomes from b...

Created: 2011-06-28 11:19:04 | Last updated: 2011-12-13 16:02:16

This pack contains resources and supplementary files for the submission to the MIND2011 workshop titled "Creating a focused corpus of factual outcomes from biomedical experiments" by James Eales, George Demetriou and Robert Stevens

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James Eales

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RapidMiner plugin for Taverna videos and descriptions

Created: 2011-06-06 10:17:52 | Last updated: 2011-12-13 16:02:04

This pack contains videos the show how to use various parts of the RapidMiner plugin for Taverna. The videos demonstrate how to build a Taverna workflow which collects a GEO dataset, uploads it to RapidAnalytics, trains a classifier on one half of the data and tests it on the other half. This classification process can be used to gauge how well mutant and control assays agree across experimental repeats.

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e-lico
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geo
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rapidminer
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svm

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James Eales

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Article title classification: kidney factomics

Created: 2011-04-21 15:20:20 | Last updated: 2011-12-13 16:02:52

This pack contains files relevant to our work on extracting facts from article titles

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