Pack: Taverna - VPH-Share workshop 17-18 July 2014
Title: Taverna - VPH-Share workshop 17-18 July 2014
Description
Taverna - VPH-Share workshop 17-18 July 2014
Location: The Pam Liversidge Building, Sir Frederick Mappin Building – Sheffield S1 3JD, UK
Registration link: http://bit.ly/vph-share-training
Format: The workshop is a two-day hands-on training event about workflows in the biomedical arena, with a focus on VPH-Share and Taverna.
Target community & qualifications: The target community is developers and research scientists working in all areas of biomedical/healthcare research within the University of Sheffield. A desirable but not mandatory pre-requisite for the hands-on training course will be some level of exposure to computer programming.
Objective: The training event introduces participants to the role of workflows as exemplified by the VPH-Share and Taverna projects, and teach the attendees how to:
- Expose, access and share data, tools and workflows via VPH-Share
- Build cloud applications and wrap tools on the VPH-Share platform
- Register, discover and reuse tools and web services from BioCatalogue and VPH-Share
- Develop scientific workflows locally on the Taverna Workbench and via the VPH-Share portal
Outcomes: After completion of the course, participants will have registered access to VPH-Share services to support their own research and will:
- Appreciate the role, strengths and weaknesses of workflow-based approaches
- Have an understanding of Taverna and its contribution to workflow design/implementation
- Have an understanding of the VPH-Share infrastructure (Portal, Cloud, Datasets, Applications & Workflows)
- Be able to construct simple workflows in order to support their own research
- Be able to discover and share data, web services and workflows
Tutorial order:
Items (12)
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File: Advanced Taverna Features Presentation (Alan Williams)
Added by Alan Williams ... more than 1 year ago (2014-07-16 12:10:31)
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Workflow: Demonstration of configurable iteration (Alan Williams)
Added by Alan Williams ... more than 1 year ago (2014-07-16 11:49:45)
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Workflow: Download images for gene (Alan Williams)
Added by Alan Williams ... more than 1 year ago (2014-07-13 18:40:06)
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Workflow: EBI_InterproScan_broken (Alan Williams)
Added by Alan Williams ... more than 1 year ago (2014-07-09 16:32:11)
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Workflow: Experiments for gene (Alan Williams)
Added by Alan Williams ... more than 1 year ago (2014-07-15 10:50:50)
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File: Gene spreadsheet for VPH-Share workshop (Alan Williams)
Added by Alan Williams ... more than 1 year ago (2014-07-13 17:33:11)
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File: Genes for VPH-Share workshop (Alan Williams)
Added by Alan Williams ... more than 1 year ago (2014-07-13 17:33:20)
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File: Help presentation (Alan Williams)
Added by Alan Williams ... more than 1 year ago (2014-07-16 12:14:07)
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File: Introduction to using components presentation (Alan Williams)
Added by Alan Williams ... more than 1 year ago (2014-07-16 12:12:58)
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File: myGrid Tools for Scientists Presentation (Alex Nenadic)
Added by Alex Nenadic ... more than 1 year ago (2014-07-16 12:05:04)
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File: Taverna Workbench introduction presentation (Alan Williams)
Added by Alan Williams ... more than 1 year ago (2014-07-16 12:15:31)
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File: XPath tutorial presentation (Alan Williams)
Added by Alan Williams ... more than 1 year ago (2014-07-16 12:21:04)
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