Snapshot of the Pack: A workflow approach to mine pathway databases provides novel biological insight into the genetics of metabolomics data (from myExperiment)

Pack Details

Title	A workflow approach to mine pathway databases provides novel biological insight into the genetics of metabolomics data
Items	5
Created by	Harish Dharuri
Created at	14:50:03 on Sunday, 12 August 2012
Last updated at	13:27:45 on Friday, 06 September 2013

Description

The pack contains workflows used to generate gene and snp sets for metabolites that were measured in the Illig et al publication. The workflows interrogate the Kegg and Biocyc pathway databases to find genes present in pathways and reactions relevant to a given metabolite.

Downloaded Items (5)

Workflow: BioCyc:Reaction Scheme [ open local copy ]
Type: Taverna 2
Originally uploaded by: Harish Dharuri
Version: 1 (created on: 06/09/2013, last edited on: 06/09/2013)
Version uploaded by: Harish Dharuri

Added to pack by: Harish Dharuri (06/09/2013 @ 13:27:45)
Comment: none
Workflow: BioCyc:Pathway Scheme [ open local copy ]
Type: Taverna 2
Originally uploaded by: Harish Dharuri
Version: 1 (created on: 06/09/2013, last edited on: 06/09/2013)
Version uploaded by: Harish Dharuri

Added to pack by: Harish Dharuri (06/09/2013 @ 13:25:44)
Comment: none
Workflow: Create_SNP_Set [ open local copy ]
Type: Taverna 2
Originally uploaded by: Harish Dharuri
Version: 1 (created on: 21/08/2012, last edited on: 21/08/2012)
Version uploaded by: Harish Dharuri

Added to pack by: Harish Dharuri (21/08/2012 @ 01:51:27)
Comment: none
Workflow: Kegg:Reactions Scheme [ open local copy ]
Type: Taverna 2
Originally uploaded by: Harish Dharuri
Version: 2 (created on: 20/08/2012, last edited on: 27/08/2013)
Version uploaded by: Harish Dharuri

Added to pack by: Harish Dharuri (20/08/2012 @ 22:11:34)
Comment: none
Workflow: KEGG:Pathway Scheme [ open local copy ]
Type: Taverna 2
Originally uploaded by: Harish Dharuri
Version: 2 (created on: 14/08/2012, last edited on: 27/08/2013)
Version uploaded by: Harish Dharuri

Added to pack by: Harish Dharuri (14/08/2012 @ 14:27:01)
Comment: none

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Packs within this pack:	0
External items:	0
Items that can be viewed, but not downloaded:	0; ( 0 workflows, 0 files )
Items that cannot be viewed:	0

Workflows:	5
Files:	0

Snapshot of the Pack: A workflow approach to mine pathway databases provides novel biological insight into the genetics of metabolomics data

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Description

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