View Group ContentGroup: NBIC-Amsterdam
Overview
This is the group where you can find tutorial exercises, workflows and related material about using Taverna in the NBIC course on Managing Life Science Data
Created at: Friday 14 October 2011 12:27:54 (UTC)
News
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Katy Wolstencroft shared InterproScan without LoopingThis workflow performs an interproscan at the EBI on sequences provided as input. The output is provided as text or png. This workflow uses the new EBI services, which are asynchronous and require looping over the nested workflow (Status) until the workflow has finished. This workflow will not work p …Wednesday 08 May 2013 14:52:09 (UTC)
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Katy Wolstencroft shared BiomartAndEMBOSSDiseaseThis workflow retrieves all genes on human chromosome 22 that are associated with a disease and aligns the upstream regions with mouse and rat homologues. The alignments are plotted and corresponding sequence ids are also returned. Using Biomart and EMBOSS soaplab services, This workflow retrieves a …Wednesday 08 May 2013 14:52:07 (UTC)
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Katy Wolstencroft shared EMBL-EBI ClustalW2_SOAPPerform a ClustalW2 alignment of protein sequences using the EMBL-EBI’s ClustalW2 (SOAP) service (see http://www.ebi.ac.uk/Tools/webservices/services/msa/clustalw2_soap ). This workflow uses the new EBI services, which are asynchronous and require looping over the nested workflow (Status) until the …Wednesday 08 May 2013 14:52:07 (UTC)
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Helen Hulme, Reinout van Schouwen, Eleni, Pingou, Jeroen, Aravindvenkat, Shayan Shahand, Zuotian tatum, Ward Weistra, and Marco Roos joined the NBIC-Amsterdam group
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Owner
Members (11)
