Group: Concept profile generation pipeline


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Created at: Thursday 11 July 2013 13:04:17 (UTC)

Unique name: wf4ever_cpgp



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    Kristina Hettne shared Concept profile analysis using Anni Web services
    Concept profile analysis is a knowledge discovery method that proved successful in generating hypotheses about molecular mechanisms explaining the results from genotype-phenotype studies. This technology has been implemented in the Anni standalone application ( ). This pa …
    Wednesday 28 August 2013 12:02:59 (UTC)
  2. 4056?size=48x48
    Sander van boom shared PubMed Search and Solr storage
    Based on the work of Fisher: This workflow takes in a search term, are passed to the eSearch function and searched for in PubMed. I extended by removing outputs and text extraction and addded an automatic Solr storage process using a post.jar, specified by the user. Before running this workflow, make …
    Thursday 25 July 2013 14:38:20 (UTC)
  3. 4056?size=48x48
    Sander van boom shared wf4ever_document_extraction_and_storage
    The workflow uses parts of the existing BioAid workflow by Marco Roos ( ) The workflow stores found articles in a Solr database. Make sure that Solr is running in the correct directory (stored in the Solr_directory value).
    Wednesday 24 July 2013 14:49:35 (UTC)
  4. 4056?size=48x48
    Sander van boom shared wf4ever_PDF2TXT2Solr_Database
    This workflow extracts the text of a .pdf file and stores it in a .txt file. Then it stores the .txt file in a Solr database.
    Wednesday 24 July 2013 13:23:36 (UTC)
  5. 4056?size=48x48
    Sander van boom created the Concept profile generation pipeline group
    Thursday 11 July 2013 13:04:17 (UTC)

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