Group: Concept profile generation pipeline

News

1. 

   Kristina Hettne shared Concept profile analysis using Anni Web services

   Concept profile analysis is a knowledge discovery method that proved successful in generating hypotheses about molecular mechanisms explaining the results from genotype-phenotype studies. This technology has been implemented in the Anni standalone application ( http://biosemantics.org/anni ). This pa …

   Wednesday 28 August 2013 12:02:59 (UTC)
2. 

   Sander van boom shared PubMed Search and Solr storage

   

   Based on the work of Fisher: This workflow takes in a search term, are passed to the eSearch function and searched for in PubMed. I extended by removing outputs and text extraction and addded an automatic Solr storage process using a post.jar, specified by the user. Before running this workflow, make …

   Thursday 25 July 2013 14:38:20 (UTC)
3. 

   Sander van boom shared wf4ever_document_extraction_and_storage

   

   The workflow uses parts of the existing BioAid workflow by Marco Roos ( http://www.myexperiment.org/workflows/74.html ) The workflow stores found articles in a Solr database. Make sure that Solr is running in the correct directory (stored in the Solr_directory value).

   Wednesday 24 July 2013 14:49:35 (UTC)
4. 

   Sander van boom shared wf4ever_PDF2TXT2Solr_Database

   

   This workflow extracts the text of a .pdf file and stores it in a .txt file. Then it stores the .txt file in a Solr database.

   Wednesday 24 July 2013 13:23:36 (UTC)
5. 

   Kristina Hettne, and Eelke van der Horst joined the Concept profile generation pipeline group
6. 

   Sander van boom created the Concept profile generation pipeline group

   Thursday 11 July 2013 13:04:17 (UTC)