Workflow1ID1112201732010-03-11 12:05:56.620 GMTsearchSimple_database00SWISS2010-03-11 12:05:46.579 GMTblastp2010-03-11 12:04:43.427 GMTsearchSimple_program00blastp2010-03-11 12:05:25.291 GMTEmailAddress00SequencesearchSimple_ResultInterproScan_outGet_Protein_FASTAid0outputText00net.sf.taverna.t2.activitieslocalworker-activity1.0net.sf.taverna.t2.activities.localworker.LocalworkerActivitynet.sourceforge.taverna.scuflworkers.ncbi.ProteinFastaWorkerworkflowjava.lang.Stringtrueid0'text/plain'0outputText0'text/plain'net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesearchSimplequery0program0database0Result00net.sf.taverna.t2.activitieswsdl-activity1.0net.sf.taverna.t2.activities.wsdl.WSDLActivityhttp://xml.nig.ac.jp/wsdl/Blast.wsdlsearchSimplenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeEBI_InterProScanEmail_address0Sequence_or_ID0InterProScan_text_result00net.sf.taverna.t2.activitiesdataflow-activity1.0net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGet_Protein_FASTAidIDsearchSimplequeryGet_Protein_FASTAoutputTextsearchSimpleprogramsearchSimple_programsearchSimpledatabasesearchSimple_databaseEBI_InterProScanEmail_addressEmailAddressEBI_InterProScanSequence_or_IDGet_Protein_FASTAoutputTextSequenceGet_Protein_FASTAoutputTextsearchSimple_ResultsearchSimpleResultInterproScan_outEBI_InterProScanInterProScan_text_resultJeannie Upton2010-03-11 11:58:18.629 GMTEBI_InterProScanEmail_address00For EBI's statistics, your email address2010-01-26 14:44:08.565 GMTnobody@nowhere.net2010-01-26 14:44:05.175 GMTFor statistics, your email address2010-01-26 14:44:00.966 GMTSequence_or_ID00uniprot:wap_rat2010-01-26 14:43:43.662 GMTEBI Database identifier2010-01-26 14:43:52.936 GMTInterProScan_text_resultInterProScan_XML_resultJob_IDInterProScan_GFFstatusInput_datacontent0type0output00net.sf.taverna.t2.activitieswsdl-activity1.0net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="data" name="" qname="{http://www.ebi.ac.uk/WSInterProScan}data"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="type" qname="data>type" /><s:basetype optional="false" unbounded="false" typename="string" name="content" qname="data>content" /></s:elements></s:complextype></s:extensions>java.lang.Stringtruetype0'text/plain'java.lang.Stringtruecontent0'text/plain'0output0'text/xml'net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGet_XML_resultjobid0type0attachmentList11result00net.sf.taverna.t2.activitieswsdl-activity1.0net.sf.taverna.t2.activities.wsdl.WSDLActivityhttp://www.ebi.ac.uk/Tools/webservices/wsdl/WSInterProScan.wsdlpollnet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeFormat_as_GFFinterproscan_text0interproscan_gff00net.sf.taverna.t2.activitiesbeanshell-activity1.0net.sf.taverna.t2.activities.beanshell.BeanshellActivityworkflowjava.lang.Stringtrueinterproscan_text0'text/plain'0interproscan_gff0'text/plain'net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeJob_paramsseqtype0crc0goterms0async0email0output00net.sf.taverna.t2.activitieswsdl-activity1.0net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="inputParams" name="params" qname="{http://www.ebi.ac.uk/WSInterProScan}inputParams"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="app" qname="inputParams>app" /><s:basetype optional="false" unbounded="false" typename="boolean" name="crc" qname="inputParams>crc" /><s:basetype optional="false" unbounded="false" typename="string" name="seqtype" qname="inputParams>seqtype" /><s:basetype optional="false" unbounded="false" typename="int" name="trlen" qname="inputParams>trlen" /><s:basetype optional="false" unbounded="false" typename="int" name="trtable" qname="inputParams>trtable" /><s:basetype optional="false" unbounded="false" typename="boolean" name="goterms" qname="inputParams>goterms" /><s:basetype optional="false" unbounded="false" typename="boolean" name="async" qname="inputParams>async" /><s:basetype optional="false" unbounded="false" typename="string" name="outformat" qname="inputParams>outformat" /><s:basetype optional="false" unbounded="false" typename="string" name="email" qname="inputParams>email" /></s:elements></s:complextype></s:extensions>java.lang.Stringtrueapp0'text/plain'java.lang.Stringtruecrc0'text/plain'java.lang.Stringtrueseqtype0'text/plain'java.lang.Stringtruetrlen0'text/plain'java.lang.Stringtruetrtable0'text/plain'java.lang.Stringtruegoterms0'text/plain'java.lang.Stringtrueasync0'text/plain'java.lang.Stringtrueoutformat0'text/plain'java.lang.Stringtrueemail0'text/plain'0output0'text/xml'net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeUnpack_XML_resultbytes0string00net.sf.taverna.t2.activitieslocalworker-activity1.0net.sf.taverna.t2.activities.localworker.LocalworkerActivityworkflow[Btruebytes0'application/octet-stream'0string0'text/plain'net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGet_text_resulttype0jobid0attachmentList11result00net.sf.taverna.t2.activitieswsdl-activity1.0net.sf.taverna.t2.activities.wsdl.WSDLActivityhttp://www.ebi.ac.uk/Tools/webservices/wsdl/WSInterProScan.wsdlpollnet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokerunInterProScancontent0params0jobid00attachmentList11net.sf.taverna.t2.activitieswsdl-activity1.0net.sf.taverna.t2.activities.wsdl.WSDLActivityhttp://www.ebi.ac.uk/Tools/webservices/wsdl/WSInterProScan.wsdlrunInterProScannet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeContent_listWSArrayofData1output00net.sf.taverna.t2.activitieswsdl-activity1.0net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:arraytype optional="false" unbounded="false" wrapped="false" typename="WSArrayofData" name="content" qname="{http://www.ebi.ac.uk/WSInterProScan}WSArrayofData"><s:elementtype><s:complextype optional="false" unbounded="false" typename="data" name="" qname="{http://www.ebi.ac.uk/WSInterProScan}data"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="type" qname="data>type" /><s:basetype optional="false" unbounded="false" typename="string" name="content" qname="data>content" /></s:elements></s:complextype></s:elementtype></s:arraytype></s:extensions>java.lang.StringtrueWSArrayofData1l('text/xml')0output0'text/xml'net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeUnpack_text_resultbytes0string00net.sf.taverna.t2.activitieslocalworker-activity1.0net.sf.taverna.t2.activities.localworker.LocalworkerActivityworkflow[Btruebytes0'application/octet-stream'0string0'text/plain'net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeInput_data_type_defaultValuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.0net.sf.taverna.t2.activities.stringconstant.StringConstantActivitysequencenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGet_XML_result_type_defaultValuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.0net.sf.taverna.t2.activities.stringconstant.StringConstantActivitytoolxmlnet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeJob_params_crc_defaultValuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.0net.sf.taverna.t2.activities.stringconstant.StringConstantActivity1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeJob_params_seqtype_defaultValuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.0net.sf.taverna.t2.activities.stringconstant.StringConstantActivitypnet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeJob_params_goterms_defaultValuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.0net.sf.taverna.t2.activities.stringconstant.StringConstantActivity1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeJob_params_async_defaultValuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.0net.sf.taverna.t2.activities.stringconstant.StringConstantActivity1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGet_text_result_type_defaultValuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.0net.sf.taverna.t2.activities.stringconstant.StringConstantActivitytoolrawnet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecheckStatusjobid0status00net.sf.taverna.t2.activitieswsdl-activity1.0net.sf.taverna.t2.activities.wsdl.WSDLActivityhttp://www.ebi.ac.uk/Tools/webservices/wsdl/WSInterProScan.wsdlcheckStatusnet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.0</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<script>loop = "" + status.equals("RUNNING");
if ("true".matches(loop)) {
Thread.sleep(500);
}</script>
<dependencies />
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
<name>status</name>
<depth>0</depth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<granularDepth>0</granularDepth>
<name>loop</name>
<depth>0</depth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>truenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeInput_datacontentSequence_or_IDInput_datatypeInput_data_type_defaultValuevalueGet_XML_resultjobidrunInterProScanjobidGet_XML_resulttypeGet_XML_result_type_defaultValuevalueFormat_as_GFFinterproscan_textUnpack_text_resultstringJob_paramsseqtypeJob_params_seqtype_defaultValuevalueJob_paramscrcJob_params_crc_defaultValuevalueJob_paramsgotermsJob_params_goterms_defaultValuevalueJob_paramsasyncJob_params_async_defaultValuevalueJob_paramsemailEmail_addressUnpack_XML_resultbytesGet_XML_resultresultGet_text_resulttypeGet_text_result_type_defaultValuevalueGet_text_resultjobidrunInterProScanjobidrunInterProScancontentContent_listoutputrunInterProScanparamsJob_paramsoutputContent_listWSArrayofDataInput_dataoutputUnpack_text_resultbytesGet_text_resultresultcheckStatusjobidrunInterProScanjobidInterProScan_text_resultUnpack_text_resultstringInterProScan_XML_resultUnpack_XML_resultstringJob_IDrunInterProScanjobidInterProScan_GFFFormat_as_GFFinterproscan_gffstatuscheckStatusstatusEBI_InterProScan for Taverna 22009-05-26 14:53:47.508 BSTEBI_InterProScan_T22009-05-26 14:59:16.89 BSTEBI_InterProScan2009-02-03 09:38:48.949 GMTHamish McWilliam2009-02-03 09:38:48.949 GMTPerform an InterProScan analysis of a protein sequence using the EBI’s WSInterProScan service (see http://www.ebi.ac.uk/Tools/webservices/services/interproscan). The input sequence to use and the user e-mail address are inputs, the other parameters for the analysis (see Job_params) are allowed to default.
InterProScan searches a protein sequence against the protein family and domain signature databases integrated into InterPro (see http://www.ebi.ac.uk/interpro/). A set of matches to the signatures are returned, which are annotated with the corresponding InterPro and GO term assignments for these signature matches.
checkStatus is executed repeatedly as long as the status is equal to RUNNING - check Details -> Advanced for its loop condition.2010-01-26 14:45:08.173 GMTPerform an InterProScan analysis of a protein sequence using the EBI’s WSInterProScan service (see http://www.ebi.ac.uk/Tools/webservices/services/interproscan). The input sequence to use and the user e-mail address are inputs, the other parameters for the analysis (see Job_params) are allowed to default.
InterProScan searches a protein sequence against the protein family and domain signature databases integrated into InterPro (see http://www.ebi.ac.uk/interpro/). A set of matches to the signatures are returned, which are annotated with the corresponding InterPro and GO term assignments for these signature matches.2009-02-03 09:38:48.949 GMTPerform an InterProScan analysis of a protein sequence using the EBI’s WSInterProScan service (see http://www.ebi.ac.uk/Tools/webservices/services/interproscan). The input sequence to use and the user e-mail address are inputs, the other parameters for the analysis (see Job_params) are allowed to default.
InterProScan searches a protein sequence against the protein family and domain signature databases integrated into InterPro (see http://www.ebi.ac.uk/interpro/). A set of matches to the signatures are returned, which are annotated with the corresponding InterPro and GO term assignments for these signature matches.
checkStatus is executed repeatedly as long as the status is equal to RUNNING - check Details -> Advanced for loop condition.2010-01-26 14:44:52.988 GMTHamish McWilliam. Modified by Katy Wolstencroft and Stian Soiland-Reyes2009-05-26 14:53:32.664 BST