1. Home

All content

Search filter terms
Filter by category
File
1239
Pack
368
Filter by type
XML
109
Filter by tag
Filter by user
Filter by licence
by-sa
3223
by
355
Filter by group
Filter by wsdl
Filter by curation
Results per page:
Sort by:
Showing 4523 results. Use the filters on the left and the search box below to refine the results.
Uploader
4528?size=60x60 In Insilic...
Show View Download Download

Blob Complexity Isosteres

Created: 2020-04-27 13:28:21

Credits: User Insilicoconsulting

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Isosteric transforms generated using compounds referenced in Pubmed and whose CDK complexity descriptor is same. 

File type: text/csv

Comments: 0 | Viewed: 93 times | Downloaded: 4 times

This File has no tags!

Creator
4528?size=60x60 In Insilic...
Show View Download Download

Pack Isosteric transform library


Created: 2020-04-27 13:23:39 | Last updated: 2020-04-27 13:29:56

This Isostere pack contains files where isosteric transforms have been generated from a variety of sources and equivalent chemical descriptors.For example one can generate a measure of CDK molecular complexity (branching and ring order add complexity) and then find fragments , frequently occurring R-groups or small molecules that have same value. This naturally leads to well known isosteres, amongst others.

1 item in this pack

Comments: 0 | Viewed: 105 times | Downloaded: 6 times

Tags:
Excel 2007 Macro-Enabled Workbook
Uploader
Avatar mevlüt Aydemir

Workflow deneme (1)

deneme

Created: 2020-04-27

Credits: User mevlüt Aydemir Network-member BAIBU

KNIME
Uploader
4528?size=60x60 In Insilic...

Workflow Deriving factual information from WHO COVI... (1)

Thumb
 WHO has posted a CSV that's frequently updated with COVID abstracts. A simple PubMed search reveals thousands of abstracts too. So here's an NLP pipeline to mine these and extract meaningful sentences/facts using Stanford Open Information Extractor and Biological entity tagging. #knime #naturallanguageprocessing #textanalytics #textmining #covid19 #nlp #datascience #WHO 

Created: 2020-04-12

Credits: User Insilicoconsulting

Uploader
4528?size=60x60 In Insilic...
Show View Download Download

Blob Knime Data Table for Antiviral activity multiclass P...

Created: 2020-03-25 06:18:32

Credits: User Insilicoconsulting

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This is the CTD data table associated with my recent workflow Antiviral activity multiclass Predictor.

File type: Trident (Package)

Comments: 0 | Viewed: 69 times | Downloaded: 1 time

This File has no tags!

KNIME
Uploader
4528?size=60x60 In Insilic...

Workflow Antiviral activity multiclass Predictor (1)

Thumb
A simple multi-class antiviral activity predictor based on expanded Pubchem fingerprints and random forest algorithm. Seems to work well to perform quick screens for antiviral molecules.Download training data from CTD (http://ctdbase.org/downloads/) or  use this preprocessed version https://www.myexperiment.org/files/2285.html. Write to me at rajeev.gangal@gmail.com regarding any queries.I make no claim that the predictive model is accurate for clinical hypotheses or that it will find mo...

Created: 2020-03-23 | Last updated: 2020-03-25

Credits: User Insilicoconsulting

Uploader
Avatar Miriam Payá
Show View Download Download

Blob workflow as file

Created: 2020-03-18 09:00:34

Credits: User Miriam Payá

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Galaxy wf for rnaseq analysis with diff expr 

File type: Trident (Package)

Comments: 0 | Viewed: 62 times | Downloaded: 2 times

This File has no tags!

Uploader
4450?size=60x60 In Drkrish...
Show View Download Download

Blob HCV NS3/4A 3 Protease Inhibitors: Simeprevir, Proces...

Created: 2020-02-19 06:12:03

Credits: User Drkrishnasarmapathy

License: Creative Commons Attribution-Share Alike 3.0 Unported License

In polymerase and protease drug targets and drug development, which has resulted in a strong infectious disease R&D portfolio,”and has given the company its key pipeline asset, simeprevir (TMC435), a novel protease inhibitor in Phase III clinicaldevelopment for hepatitis C that is being developed in collaboration with Janssen Pharmaceuticals. Currently, hepatitis C virus(HCV) infection is considered a serious health-care problem all over the world. A good number of direct-acting ant...

File type: Adobe PDF

Comments: 0 | Viewed: 7 times | Downloaded: 1 time

This File has no tags!

Uploader
4450?size=60x60 In Drkrish...
Show View Download Download

Blob Chronic Hepatitis (Chc), Viral Polymerase Nucleotide...

Created: 2019-10-12 11:22:31

Credits: User Drkrishnasarmapathy

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Sofosbuvir is a viral polymerase nucleotide inhibitor that was approved in December2013 by the United States Food and Drug Administration (FDA), and in January 2014by the European Medicines Agency for the treatment of HCV infection [1]. The WHOGuidelines for the screening, care and treatment of persons with hepatitis C infectionrecommend sofosbuvir in combination with ribavirin in genotypes 1, 2, 3 and 4 HCVinfection, either with or without pegylated interferon (depending on the HCV genotype)...

File type: Adobe PDF

Comments: 0 | Viewed: 11 times | Downloaded: 1 time

This File has no tags!

Uploader
4540?size=60x60 Us Joshua Borycz
Show View Download Download

Blob Test

Created: 2019-10-03 17:25:58

Credits: User Joshua Borycz

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Test

File type: Rich Text Format document

Comments: 0 | Viewed: 11 times | Downloaded: 1 time

This File has no tags!

Results per page:
Sort by:
Funded by: BioVeL, EPSRC, JISC, Microsoft

Affiliates: myGrid, Taverna, BioCatalogue
About | Privacy | Publications | Contact / Feedback | Mailing List
Icons: Silk icon set 1.3

Copyright © 2007 – 2018 The University of Manchester and University of Southampton