myExperiment - Content

« Previous 1 … 304 305 306 307 308 … 453 Next »

Results per page:

Sort by:

Showing 4527 results. Use the filters on the left and the search box below to refine the results.

Creator

David De Roure

View

Download

Presentation - The Multiple Networks of myExperiment

Created: 2011-05-24 07:16:54 | Last updated: 2011-05-24 07:22:08

Title: The Multiple Networks of myExperiment Speaker: David De Roure Event: CCGrid 2011 Social Networks Workshop Event URL: http://www.ksri.kit.edu/Default.aspx?PageId=800&lang=de Location: Newport Beach, CA, US Date: Monday, May 23, 2011 Formats: ..pptx

1 item in this pack

Comments: 0 | Viewed: 19 times | Downloaded: 7 times

This Pack has no tags!

Uploader

Adam Woznica

View

Download

Plots fibrosis data (R script)

Created: 2011-05-23 13:02:34 | Last updated: 2011-05-24 20:27:58

Credits: Adam Woznica

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Plots a (modified) heatmap of the fibrosis gene data describing different genes used in various studies on fibrosis. The input dataset is prepared in the "prepare-fibrosis-data" RM workflow. Possible values in the input data are: 1 (a gene is Up regulated), -1 (Down regulated), 0 (Unmodified) and -2 (missing value). It requires the "gplots" R package.

File type: Trident (Package)

Comments: 0 | Viewed: 39 times | Downloaded: 18 times

This File has no tags!

Uploader

Adam Woznica

View

Download

Plots an attribute similarity matrix on gene data (R...

Created: 2011-05-23 13:01:44 | Last updated: 2011-05-25 15:46:10

Credits: Adam Woznica

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Plots an attribute similarity matrix computed from the provided data frame. The input dataset is prepared in the "prepare-gene-correlation" RM workflow and is assumed to contain genes as rows, and gene functions and locations as columns. In the visualized matrix columns correspond to gene locations and rows correspond to gene functions. The supported types of attribute similarities are: the covariance, the Hamming distance, and a modified Hamming distance that focuses on columns wit...

File type: Trident (Package)

Comments: 0 | Viewed: 60 times | Downloaded: 54 times

This File has no tags!

Uploader

Adam Woznica

View

Download

R library

Created: 2011-05-23 12:50:59 | Last updated: 2011-05-24 20:27:32

Credits: Adam Woznica

License: Creative Commons Attribution-Share Alike 3.0 Unported License

R library used by other R scripts.

File type: Trident (Package)

Comments: 0 | Viewed: 36 times | Downloaded: 20 times

This File has no tags!

Uploader

Adam Woznica

View

Download

RM repository directory containing data

Created: 2011-05-23 12:49:04 | Last updated: 2011-05-24 20:26:36

Credits: Adam Woznica

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Compressed directory from RM repository containing data used by the different workflows and R scirpts.

File type: ZIP archive

Comments: 0 | Viewed: 30 times | Downloaded: 17 times

This File has no tags!

RapidMiner

Uploader

Adam Woznica

Frequent Itemset and association rules ana... (1)

Download

Generates frequent itemsets and association rules from the gene data. Frequent itemsets correspond to different gene characteristics (locations and functions) that frequently occur together across different genes. The quality of a frequent itemset is given by its support which is the fraction of genes for which a given combination of gene characteristics hold; the longer the itemset the lower its support. Based on the frequent itemset this WF also generates association rules which have some...