Get ontology parents

Created: 2015-11-16 09:56:19 Last updated: 2016-04-26 16:08:03

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Retrieves the ontology parents of an entity including the relationship type, using the ChEBI identifier.

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Workflow Components

Authors (1)

Titles (1)

Descriptions (1)

Dependencies (0)

Inputs (1)

Name	Description
chebiId	A compound represented by its chebi identifier

Processors (6)

Name	Type	Description
getOntologyParents	wsdl	Wsdl http://www.ebi.ac.uk/webservices/chebi/2.0/webservice?wsdl Wsdl Operation getOntologyParents
getOntologyParents_input	xmlsplitter
getOntologyParents_result	xmlsplitter
XPath_Service	xpath	Xpath Expression /default:return/default:ListElement/default:chebiId
XPath_Service_2	xpath	Xpath Expression /default:return/default:ListElement/default:chebiName
XPath_Service_3	xpath	Xpath Expression /default:return/default:ListElement/default:type

Beanshells (0)

Outputs (3)

Name	Description
id
name
type

Datalinks (9)

Source	Sink
getOntologyParents_input:output	getOntologyParents:parameters
chebiId	getOntologyParents_input:chebiId
getOntologyParents:result	getOntologyParents_result:input
getOntologyParents_result:return	XPath_Service:xml_text
getOntologyParents_result:return	XPath_Service_2:xml_text
getOntologyParents_result:return	XPath_Service_3:xml_text
XPath_Service:nodelist	id
XPath_Service_2:nodelist	name
XPath_Service_3:nodelist	type

Coordinations (0)

Information Workflow Type

Taverna 2

Information Uploader

Kristina Hettne

Information License

All versions of this Workflow are licensed under:

Information Version 1 (earliest) (of 2)

Information Credits (1)

(People/Groups)

Kristina Hettne

Information Attributions (1)

(Workflows/Files)

Get ontology parents

Information Tags (5)

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Information Shared with Groups (1)

BioSemantics

Information Featured In Packs (1)

Pathway analysis with WikiPathways

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Information Attributed By (0)

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None

Information Favourited By (0)

No one

Information Statistics

1977 viewings

1058 downloads

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Other workflows that use similar services (6)

Only the first 2 workflows that use similar services are shown. View all workflows that use these services.

Taverna 2

Uploader

Peter Li

getLiteEntity (1)

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Retrieves a list of "lite" entities containing only the ChEBI ASCII name and ChEBI identifier. The input parameters are a search string and a search category. If the search category is null then it will search under all fields. The search string accepts the wildcard character "*" and also unicode characters. You can get maximum results upto 5000 entries at a time.

Created: 2010-07-13 | Last updated: 2010-07-13

Credits: Peter Li

Taverna 2

Uploader

Peter Li

Get complete chebi entity (1)

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Returns informations for a given compound represented by its chebi identifier

Created: 2010-07-13 | Last updated: 2010-07-13

Credits: Peter Li

Get ontology parents

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Workflow Components

Wsdl

Wsdl Operation

Xpath Expression

Xpath Expression

Xpath Expression

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Other workflows that use similar services (6)