SUB_genes_info_names.xml

Created: 2008-07-12 10:20:46 Last updated: 2008-07-12 10:21:18

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Workflow Components

Inputs (0)

Processors (8)

Name	Type	Description
chromosome	stringconstant
end	stringconstant
species	stringconstant
start	stringconstant
Get_Gene_Info	workflow
getgenesbyspecies	soaplabwsdl	Retrieves a list of Ensembl genes for a given species, chromosome and position
getcurrentdatabase	soaplabwsdl	Retrieves the current databases from ENSEMBL for a species
NestedWorkflow	workflow

Beanshells (1)

Name	Description	Inputs	Outputs
parse_gene_name		input	output

Outputs (4)

Name	Description
current_database
genes_in_region
gene_info
gene_name

Links (11)

Source	Sink
Get_Gene_Info:gene_info	NestedWorkflow:gene_info_input
Get_Gene_Info:gene_info	gene_info
NestedWorkflow:gene_name	gene_name
chromosome:value	getgenesbyspecies:chromo
end:value	getgenesbyspecies:end
getcurrentdatabase:output	current_database
getcurrentdatabase:output	getgenesbyspecies:database
getgenesbyspecies:output	Get_Gene_Info:genes_in_region
getgenesbyspecies:output	genes_in_region
species:value	getcurrentdatabase:species
start:value	getgenesbyspecies:start

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Information Workflow Type

Taverna 1

Information Uploader

Antoon Goderis

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All versions of this Workflow are licensed under:

Information Version 1 (of 1)

Information Credits (1)

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Paul Fisher

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benchmarks

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Paul Fisher workflows for benchmarks PR and CA2

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Information Statistics

1851 viewings

1958 downloads

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Version History

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SUB_genes_info_names.xml

Created by Antoon Goderis on Saturday 12 July 2008 10:20:46 (UTC)

Last edited by Antoon Goderis on Saturday 12 July 2008 10:21:18 (UTC)