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Content description of RO Propagation of quantities

Created: 2011-11-25 09:29:26 | Last updated: 2011-12-01 13:26:42

Credits: Jose Enrique Ruiz

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Purpose of RO Propagation of quantities

Created: 2011-11-25 09:33:29 | Last updated: 2011-12-01 13:27:32

Credits: Jose Enrique Ruiz

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Data involved in RO Propagation of quantities

Created: 2011-12-01 13:16:59 | Last updated: 2011-12-01 13:17:02

Credits: Jose Enrique Ruiz

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Bibliographic references in RO Propagation of quanti...

Created: 2011-12-01 13:20:13 | Last updated: 2011-12-01 13:20:17

Credits: Jose Enrique Ruiz

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Scripts in RO Propagation of quantites

Created: 2011-12-01 13:21:37 | Last updated: 2011-12-01 13:23:17

Credits: Jose Enrique Ruiz

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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SQL scripts issued from RO Propagation of quantities

Created: 2011-12-01 13:22:35 | Last updated: 2011-12-01 13:22:36

Credits: Jose Enrique Ruiz

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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How to use RO Propagation of quantities

Created: 2011-11-25 09:31:50 | Last updated: 2011-12-01 13:25:56

Credits: Jose Enrique Ruiz

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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D5.3v1: Propagation of interdependent quantities in ...

Created: 2011-12-01 22:12:58 | Last updated: 2011-12-01 22:13:01

Credits: Jose Enrique Ruiz

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Adobe PDF

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Carole's Keynotes

Created: 2008-09-27 19:52:17 | Last updated: 2010-05-08 20:24:47

5 items in this pack

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myExperiment paper for Concurrency Practice and Expe...

Created: 2009-04-10 13:41:56 | Last updated: 2009-04-14 08:38:09

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Natural product likeness filter

Created: 2011-05-13 19:35:39 | Last updated: 2011-08-29 14:25:47

3 items in this pack

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Propagation of properties extracted from the HyperLE...

Created: 2011-11-24 19:12:05 | Last updated: 2011-12-01 22:13:34

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Generate Atom Signatures of molecules give... (1)

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Reference: Natural Product-likeness Score and Its Application for Prioritization of Compound Libraries Peter Ertl,* Silvio Roggo, and Ansgar Schuffenhauer Novartis Institutes for BioMedical Research, CH-4002 Basel, Switzerland http://peter-ertl.com/reprints/Ertl-JCIM-48-68-2008.pdf    The natural product likeness scorer implemented by Peter Ertl was originally devised to screen large compound libraries for natural product likeness in drug designing studies. His work is re...

Created: 2011-05-13 | Last updated: 2011-05-13

Credits: Kalai

Scoring small molecules for metabolite lik... (2)

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 Prerequisite:   - CDK -Taverna Plugin 0.5.1 http://www.ts-concepts.de/cdk-taverna2/plugin/ - To run this workflow the atom_signatures file of Natural product(NP), Synthetic Molecules(SM) and query structures are needed - This could be generated from GenerateAtomSignatures.t2flow http://www.myexperiment.org/workflows/2120/download?version=1   Description of input ports : NP_file: needs precomputed Atom_signatures of desired Natural product structu...

Created: 2011-05-13 | Last updated: 2012-03-18

Credits: Kalai

Plotting distribution of natural product l... (1)

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 Prerequisite:  CDK -Taverna Plugin 0.5.1 http://www.ts-concepts.de/cdk-taverna2/plugin/ - To run this workflow you need a Score file which is written to text file.  - This could be generated from ScorerActivity.t2flow http://www.myexperiment.org/workflows/2121/download?version=1   Description of input ports : score_file: Path to file name that has pre computed scores. Note: While passing file as input it could be passed as list of many files or single fi...

Created: 2011-05-13 | Last updated: 2011-05-13

Credits: Kalai

Comparison and update values (1)

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This workflow receives two files, the name of a table and the name of a field as input. One of the file should be contain a list of old values (name galaxy and value), and the other one should be a list of new values (name galaxy,value) The workflow makes a comparison between the two files. This comparison will be a list of 7 columns: name of the galaxy, old value, old error, new value, new error, difference of value, difference of error. In other hand, this workflow makes a sql script with ...

Created: 2011-11-30 | Last updated: 2011-11-30

Calculation of distances, magnitutes and l... (4)

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Calculation of distances, corrected apparent B magnitude mB-corr and luminosities with values gathered from the HyperLEDA database. This workflow receives a list of galaxy names (hyperLEDA names. ie: KIG0001) and a file with the morphological types of those galaxies Using the name of a galaxy, the workflow querys Hyperleda to extract some properties of this galaxy (J2000 Coordinates, velocity, galactic extinction,log of axis ratio, and the Total B-magnitude ). With this properties it calcula...

Created: 2011-11-14 | Last updated: 2012-01-11

Calculation of distances, magnitutes and l... (2)

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Calculation of distances, corrected apparent B magnitude mB-corr and luminosities with values gathered from the HyperLEDA database. This workflow receives a list of galaxy names (hyperLEDA names. ie: KIG0001) and a file with the morphological types of those galaxies Using the name of a galaxy, the workflow querys Hyperleda to extract some properties of this galaxy (J2000 Coordinates, velocity, galactic extinction,log of axis ratio, and the Total B-magnitude ). With this properties it calcula...

Created: 2012-01-10 | Last updated: 2012-01-16

Credits: Stian Soiland-Reyes

Attributions: Calculation of distances, magnitutes and luminosities using HyperLEDA Data involved in RO Propagation of quantities Scripts in RO Propagation of quantites