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Items tagged with "publication" (10)

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Katy Wolstencroft

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The Data Playground: An Intuitive Workflow Specifica...

Created: 2008-06-02 14:46:40

Credits: Katy Wolstencroft Andrew Gibson

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This is a copy of the paper we wrote for the 3rd International Conference on e-Science and Grid Computing 2007 (http://www.escience2007.org/index.asp). It won the Best Paper award!

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Barend

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nano publication as a way to explain rich triples

Created: 2009-10-23 07:32:36 | Last updated: 2009-10-25 20:38:34

Credits: Barend Jan Velterop Concept Web Alliance (general)

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This paper can be used to explain what triples in our context are meant to be and to serve I will present the paper on the semantic web conference workshop 26th of November

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Paolo

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EDBT Provenance paper presentation - March, 2010

Created: 2010-03-26 14:05:34 | Last updated: 2010-03-26 14:05:52

- Keynote and PDF versions

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Workflows (7)

Taverna 2

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Alan Williams

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Data publication example (1)

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This workflow gives an example of an interaction that makes use of published input data. The data is published on the webdav and the URL passed to the HTML page.

Created: 2012-10-11

Credits: Alan Williams

Taverna 2

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Magnus Palmblad

Author Citation Network (1)

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Map citation/reference network for one author using Europe PMC Web services. This workflow is intended to show the integration of several Web services, XPath XML parsing and use of the igraph package in R. Although the workflow is functional, the information in PubMed is incomplete. This means the results may be a subset of the correct citation graph.

Created: 2015-12-04 | Last updated: 2015-12-04

Credits: Magnus Palmblad Yassene

Taverna 2

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Magnus Palmblad

SImple Europe PMC Search (1)

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This very simple workflow searches Europe PMC using the searchPublications Web Service and a conditional XPath to retrieve the article titles for all cited work matching the search query.

Created: 2015-12-04

Credits: Magnus Palmblad

Taverna 2

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Magnus Palmblad

Author Publications and Citations by Year ... (1)

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This workflow demonstrates how to connect to and use Europe PMC (http://europepmc.org/RestfulWebService) to count the number of publications and citations per year for one author. Two Web service calls are made. First, we searchPublications to retrieve the bibliographic records for all published work of a single author. Then, we getCitations to extract the year of all articles citing the work of this author. The pubYear fields is extracted from the raw Web service results and fed to an Rshel...

Created: 2015-12-04

Credits: Magnus Palmblad

Taverna 2

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Magnus Palmblad

profilePublications_over_time (1)

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This workflow takes a list of arbitrary Europe PMC search queries and generates the corresponding profiles of the number of matching publications per publication year.

Created: 2017-04-19

Credits: Magnus Palmblad

Taverna 2

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Magnus Palmblad

searchPublications_and_MapAffil (1)

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This is a workflow for spatiotemporal analysis of literature indexed in PubMed. The workflow takes an arbitrary Europe PMC search query, calls the Europe PMC Web service searchPublications and extracts the publication year and PubMed ID from the results. The first author affiliation is then geoparsed by the MapAffil Web server to get latitude and longitudes. The coordinates are then concatenated together with the publication year, to produce a single list of publication years, latitudes and ...