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Items tagged with "plants" (4)

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pmark

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Identifyr

Unique name: identifyr
Created: Tuesday 19 February 2008 21:52:13 (UTC)

Identifyr is a system for identifying objects from pictures submitted by the public.

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Robert Muetzelfeldt

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Plasmo: Plant Systems Biology Modelling

Unique name: Plasmo
Created: Friday 27 March 2009 01:19:04 (UTC)

The Plasmo project aims to create a web-based repository and portal for plant models represented in Simile XML. Simile models are based on the System Dynamics (stock-and-flow) notation, with an object-oriented flavour.

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Robert Muetzelfeldt

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Workflows (2)

SimileXMLv3

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Robert Muetzelfeldt

LINTUL crop model (1)

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LINTUL is a simple, generic crop model.

Created: 2009-04-01

Credits: Robert Muetzelfeldt

Taverna 1

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Paul Fisher

Arabidopsis thaliana QTL Analysis (1)

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This workflow searches for genes which reside in a QTL (Quantitative Trait Loci) region in Arabidopsis thaliana. The workflow requires an input of: a chromosome name or number; a QTL start base pair position; QTL end base pair position. Data is then extracted from BioMart to annotate each of the genes found in this region. The UniProt identifiers are then sent to KEGG to obtain KEGG gene identifiers. The KEGG gene identifiers are then used to searcg for pathways in the KEGG pathway database. ...

Created: 2009-07-08 | Last updated: 2009-12-14

Credits: Paul Fisher

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Non-Information Resource URI: http://www.myexperiment.org/tags/722

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