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Items tagged with "enzyme" (8)

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Files (2)Packs (1)Workflows (5)

Uploader

Paul Fisher

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Ondex Workflows

Created: 2011-09-01 17:17:57 | Last updated: 2011-09-01 17:18:05

Credits: Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This zip file contains a large number of Taverna 2 workflows that utilise the Ondex Web Service, for manipulating Ondex graphs.

File type: ZIP archive

Comments: 0 | Viewed: 70 times | Downloaded: 0 times

Tags:

annotation
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compound
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enzyme
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gene identifier
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general data store
|
graph
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ismb
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ondex
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ovtk
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oxl
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parser
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pubmed
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text
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text mining; term extraction; entity recognition

Uploader

Pablo Carbonell

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Pathway example for Selenzyme

Created: 2017-08-18 08:35:57 | Last updated: 2017-08-23 11:13:20

Credits: Pablo Carbonell

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Example of an input file containing information about a metabolic pathway to query the KNIME workflow for Selenzyme, an enzyme selection tool for pathway design.The file contains a list of reactions or generic reactions expressed in SMILES or SMARTS (SMIRKS) format. In the example, the list of reactions correspond to the different steps of a biosynthetic pathway.

File type: text/csv

Comments: 0 | Viewed: 46 times | Downloaded: 19 times

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Linked Data

Non-Information Resource URI: http://www.myexperiment.org/tags/146

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